RNA–Protein interactions for RNA: ENSMUST00000198856.1

Gm43549-201, mousemouse

TSL 1 (best) BASIC

Gene Gm43549, Length 2,661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm43549-201ENSMUST00000198856 Chic1Q8CBW7 227 aa13.77□□□□□ -0.21
Gm43549-201ENSMUST00000198856 NischQ80TM9 1593 aa12.89□□□□□ -0.35
Gm43549-201ENSMUST00000198856 Mapk8ip2Q9ERE9 830 aa12.88□□□□□ -0.35
Gm43549-201ENSMUST00000198856 Gm35339A0A140LHH9 1649 aa12.78□□□□□ -0.36
Gm43549-201ENSMUST00000198856 Phf23Q8BSN5 401 aa12.76□□□□□ -0.37
Gm43549-201ENSMUST00000198856 Plppr3Q7TPB0 716 aa12.71□□□□□ -0.38
Gm43549-201ENSMUST00000198856 Abcc9P70170 1546 aa12.5□□□□□ -0.41
Gm43549-201ENSMUST00000198856 Kcna4Q61423 654 aa12.34□□□□□ -0.43
Gm43549-201ENSMUST00000198856 Gab3Q8BSM5 595 aa12.24□□□□□ -0.45
Gm43549-201ENSMUST00000198856 Abcc8B2RUS7 1588 aa12.21□□□□□ -0.46
Gm43549-201ENSMUST00000198856 Rhox8Q6VSS7 320 aa12.13□□□□□ -0.47
Gm43549-201ENSMUST00000198856 Rtl1Q7M732 1744 aa11.95□□□□□ -0.5
Gm43549-201ENSMUST00000198856 Senp3Q9EP97 568 aaKnown RBP11.86□□□□□ -0.51
Gm43549-201ENSMUST00000198856 Ccdc180J3QNE4 1664 aa11.77□□□□□ -0.53
Gm43549-201ENSMUST00000198856 Ppargc1bQ8VHJ7 1014 aa11.61□□□□□ -0.55
Gm43549-201ENSMUST00000198856 DiexfQ8BTT6 772 aaKnown RBP11.56□□□□□ -0.56
Gm43549-201ENSMUST00000198856 ScribQ80U72 1612 aa11.54□□□□□ -0.56
Gm43549-201ENSMUST00000198856 Zcchc6Q5BLK4 1491 aaKnown RBP11.53□□□□□ -0.56
Gm43549-201ENSMUST00000198856 Ube2uB1AUC4 352 aa11.52□□□□□ -0.57
Gm43549-201ENSMUST00000198856 CatipB9EKE5 520 aa11.43□□□□□ -0.58
Gm43549-201ENSMUST00000198856 Dcaf1Q80TR8 1506 aa11.4□□□□□ -0.58
Gm43549-201ENSMUST00000198856 Rb1cc1Q9ESK9 1588 aa11.32□□□□□ -0.6
Gm43549-201ENSMUST00000198856 Rpgrip1Q9EPQ2 1331 aa11.28□□□□□ -0.6
Gm43549-201ENSMUST00000198856 Myt1Q8CFC2 1127 aa11.28□□□□□ -0.6
Gm43549-201ENSMUST00000198856 NacadQ5SWP3 1504 aa11.26□□□□□ -0.61
Gm43549-201ENSMUST00000198856 Ccdc136Q3TVA9 1136 aa11.25□□□□□ -0.61
Gm43549-201ENSMUST00000198856 Kdm5dQ62240 1548 aa11.25□□□□□ -0.61
Gm43549-201ENSMUST00000198856 Ehmt2Q9Z148 1263 aaKnown RBP11.2□□□□□ -0.62
Gm43549-201ENSMUST00000198856 HrcG5E8J6 738 aa11.17□□□□□ -0.62
Gm43549-201ENSMUST00000198856 Baz1aO88379 1555 aa11.16□□□□□ -0.62
Gm43549-201ENSMUST00000198856 Acin1Q9JIX8 1338 aaKnown RBP11.15□□□□□ -0.62
Gm43549-201ENSMUST00000198856 Sycp2Q9CUU3 1500 aa11.02□□□□□ -0.64
Gm43549-201ENSMUST00000198856 Trim41Q5NCC3 630 aa11.01□□□□□ -0.65
Gm43549-201ENSMUST00000198856 Crybg2B7ZCC2 1516 aa10.95□□□□□ -0.66
Gm43549-201ENSMUST00000198856 Dmrt2Q8BG36 561 aa10.92□□□□□ -0.66
Gm43549-201ENSMUST00000198856 Smarca2Q6DIC0 1577 aa10.92□□□□□ -0.66
Gm43549-201ENSMUST00000198856 Cep164Q5DU05 1446 aa10.85□□□□□ -0.67
Gm43549-201ENSMUST00000198856 Amer1Q7TS75 1132 aa10.8□□□□□ -0.68
Gm43549-201ENSMUST00000198856 BicraF8VPZ9 1578 aa10.79□□□□□ -0.68
Gm43549-201ENSMUST00000198856 Pcgf6Q99NA9 353 aa10.77□□□□□ -0.69
Gm43549-201ENSMUST00000198856 Ttbk1Q6PCN3 1308 aa10.76□□□□□ -0.69
Gm43549-201ENSMUST00000198856 Cngb1E1AZ71 1325 aa10.75□□□□□ -0.69
Gm43549-201ENSMUST00000198856 Rsf1E9PWW9 1441 aaKnown RBP10.71□□□□□ -0.69
Gm43549-201ENSMUST00000198856 Slc4a1apE9PX68 744 aa10.67□□□□□ -0.7
Gm43549-201ENSMUST00000198856 Cecr2E9Q2Z1 1453 aa10.67□□□□□ -0.7
Gm43549-201ENSMUST00000198856 Brd4Q9ESU6 1400 aaKnown RBP10.65□□□□□ -0.7
Gm43549-201ENSMUST00000198856 Ccdc88bQ4QRL3 1481 aa10.63□□□□□ -0.71
Gm43549-201ENSMUST00000198856 Supt5hO55201 1082 aaKnown RBP10.61□□□□□ -0.71
Gm43549-201ENSMUST00000198856 Synj1Q8CHC4 1574 aa10.6□□□□□ -0.71
Gm43549-201ENSMUST00000198856 Golga3P55937 1487 aa10.6□□□□□ -0.71
Gm43549-201ENSMUST00000198856 CenpbP27790 599 aa10.57□□□□□ -0.72
Gm43549-201ENSMUST00000198856 Esf1Q3V1V3 845 aaKnown RBP10.51□□□□□ -0.73
Gm43549-201ENSMUST00000198856 Fam71e1A1L3C1 212 aa10.49□□□□□ -0.73
Gm43549-201ENSMUST00000198856 CftrP26361 1476 aa10.49□□□□□ -0.73
Gm43549-201ENSMUST00000198856 Zeb1Q64318 1117 aa10.49□□□□□ -0.73
Gm43549-201ENSMUST00000198856 Mier1Q5UAK0 511 aa10.48□□□□□ -0.73
Gm43549-201ENSMUST00000198856 ArxO35085 564 aa10.47□□□□□ -0.73
Gm43549-201ENSMUST00000198856 Top2bQ64511 1612 aa10.46□□□□□ -0.73
Gm43549-201ENSMUST00000198856 Aplp2Q06335 707 aa10.45□□□□□ -0.74
Gm43549-201ENSMUST00000198856 Smarca4Q3TKT4 1613 aaKnown RBP10.45□□□□□ -0.74
Gm43549-201ENSMUST00000198856 Pds5bQ4VA53 1446 aaKnown RBP10.44□□□□□ -0.74
Gm43549-201ENSMUST00000198856 Cttnbp2B9EJA2 1648 aa10.43□□□□□ -0.74
Gm43549-201ENSMUST00000198856 Cc2d2aQ8CFW7 1633 aa10.42□□□□□ -0.74
Gm43549-201ENSMUST00000198856 NefmP08553 848 aa10.41□□□□□ -0.74
Gm43549-201ENSMUST00000198856 Atad2bE9Q166 1460 aaKnown RBP10.41□□□□□ -0.74
Gm43549-201ENSMUST00000198856 Trap1aP19473 224 aa10.41□□□□□ -0.74
Gm43549-201ENSMUST00000198856 Bcl11aQ9QYE3 773 aa10.39□□□□□ -0.75
Gm43549-201ENSMUST00000198856 Las1lA2BE28 776 aaKnown RBP10.38□□□□□ -0.75
Gm43549-201ENSMUST00000198856 Atf5O70191 283 aa10.38□□□□□ -0.75
Gm43549-201ENSMUST00000198856 Neurod1Q60867 357 aa10.34□□□□□ -0.75
Gm43549-201ENSMUST00000198856 Iqgap2Q3UQ44 1575 aa10.33□□□□□ -0.76
Gm43549-201ENSMUST00000198856 UbtfP25976 765 aaKnown RBP10.33□□□□□ -0.76
Gm43549-201ENSMUST00000198856 Rapgef2Q8CHG7 1496 aa10.32□□□□□ -0.76
Gm43549-201ENSMUST00000198856 Sall2Q9QX96 1004 aa10.31□□□□□ -0.76
Gm43549-201ENSMUST00000198856 Fmn1Q05860 1466 aa10.28□□□□□ -0.76
Gm43549-201ENSMUST00000198856 Top2aQ01320 1528 aaKnown RBP10.28□□□□□ -0.76
Gm43549-201ENSMUST00000198856 Myt1lP97500 1187 aa10.28□□□□□ -0.76
Gm43549-201ENSMUST00000198856 BccipQ9CWI3 316 aa10.27□□□□□ -0.77
Gm43549-201ENSMUST00000198856 Cdk11bP24788 784 aaKnown RBP10.26□□□□□ -0.77
Gm43549-201ENSMUST00000198856 Cep162Q6ZQ06 1403 aa10.24□□□□□ -0.77
Gm43549-201ENSMUST00000198856 Thoc2B1AZI6 1594 aaKnown RBP10.22□□□□□ -0.77
Gm43549-201ENSMUST00000198856 Wdr62Q3U3T8 1523 aa10.2□□□□□ -0.78
Gm43549-201ENSMUST00000198856 Ercc6F8VPZ5 1481 aa10.2□□□□□ -0.78
Gm43549-201ENSMUST00000198856 Wdr66E9Q743 1299 aa10.2□□□□□ -0.78
Gm43549-201ENSMUST00000198856 Npm2Q80W85 207 aa10.2□□□□□ -0.78
Gm43549-201ENSMUST00000198856 Aebp2Q9Z248 504 aaKnown RBP10.19□□□□□ -0.78
Gm43549-201ENSMUST00000198856 Frmpd1A2AKB4 1549 aa10.18□□□□□ -0.78
Gm43549-201ENSMUST00000198856 Gtf3c5Q8R2T8 520 aa10.17□□□□□ -0.78
Gm43549-201ENSMUST00000198856 Plekhg3Q4VAC9 1341 aa10.14□□□□□ -0.79
Gm43549-201ENSMUST00000198856 1700123L14RikQ3V2K7 440 aa10.13□□□□□ -0.79
Gm43549-201ENSMUST00000198856 4930567H17RikQ3V0K5 233 aa10.13□□□□□ -0.79
Gm43549-201ENSMUST00000198856 Clip1Q922J3 1391 aa10.13□□□□□ -0.79
Gm43549-201ENSMUST00000198856 Eif4g1Q6NZJ6 1600 aaKnown RBP10.12□□□□□ -0.79
Gm43549-201ENSMUST00000198856 TnnQ80Z71 1560 aa10.07□□□□□ -0.8
Gm43549-201ENSMUST00000198856 ClspnQ80YR7 1315 aa10.07□□□□□ -0.8
Gm43549-201ENSMUST00000198856 Hoxd11P23813 323 aa10.07□□□□□ -0.8
Gm43549-201ENSMUST00000198856 TonslQ6NZL6 1363 aa10.07□□□□□ -0.8
Gm43549-201ENSMUST00000198856 Fam135aQ6NS59 1506 aa10.07□□□□□ -0.8
Gm43549-201ENSMUST00000198856 Phldb1Q6PDH0 1371 aaKnown RBP10.06□□□□□ -0.8
Gm43549-201ENSMUST00000198856 Anks4bQ8K3X6 423 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 286.7 ms