RNA–Protein interactions for RNA: ENSMUST00000197054.1

Gm42949-201, mousemouse

TSL 1 (best) BASIC

Gene Gm42949, Length 2,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42949-201ENSMUST00000197054 Chic1Q8CBW7 227 aa16.6■□□□□ 0.25
Gm42949-201ENSMUST00000197054 Mapk8ip2Q9ERE9 830 aa15.33■□□□□ 0.05
Gm42949-201ENSMUST00000197054 Plppr3Q7TPB0 716 aa15.2■□□□□ 0.02
Gm42949-201ENSMUST00000197054 Phf23Q8BSN5 401 aa15.14■□□□□ 0.01
Gm42949-201ENSMUST00000197054 Gab3Q8BSM5 595 aa14.65□□□□□ -0.06
Gm42949-201ENSMUST00000197054 Kcna4Q61423 654 aa14.57□□□□□ -0.08
Gm42949-201ENSMUST00000197054 Senp3Q9EP97 568 aaKnown RBP14.15□□□□□ -0.14
Gm42949-201ENSMUST00000197054 Ube2uB1AUC4 352 aa13.66□□□□□ -0.22
Gm42949-201ENSMUST00000197054 Ppargc1bQ8VHJ7 1014 aa13.55□□□□□ -0.24
Gm42949-201ENSMUST00000197054 Dmrt2Q8BG36 561 aa13.04□□□□□ -0.32
Gm42949-201ENSMUST00000197054 Slc4a1apE9PX68 744 aa12.82□□□□□ -0.36
Gm42949-201ENSMUST00000197054 Fam71e1A1L3C1 212 aa12.54□□□□□ -0.4
Gm42949-201ENSMUST00000197054 Ehmt2Q9Z148 1263 aaKnown RBP12.49□□□□□ -0.41
Gm42949-201ENSMUST00000197054 Trap1aP19473 224 aa12.45□□□□□ -0.42
Gm42949-201ENSMUST00000197054 Atf5O70191 283 aa12.16□□□□□ -0.46
Gm42949-201ENSMUST00000197054 Hoxd11P23813 323 aa12.15□□□□□ -0.46
Gm42949-201ENSMUST00000197054 AcrbpQ3V140 540 aa12.01□□□□□ -0.49
Gm42949-201ENSMUST00000197054 Pde4cQ3UEI1 686 aa12.01□□□□□ -0.49
Gm42949-201ENSMUST00000197054 1700123L14RikQ3V2K7 440 aa11.98□□□□□ -0.49
Gm42949-201ENSMUST00000197054 Nlrp6Q91WS2 869 aa11.98□□□□□ -0.49
Gm42949-201ENSMUST00000197054 Ppp4r2Q0VGB7 417 aa11.92□□□□□ -0.5
Gm42949-201ENSMUST00000197054 Hs6st3Q9QYK4 470 aa11.84□□□□□ -0.51
Gm42949-201ENSMUST00000197054 Dnajc5bQ9CQ94 199 aa11.82□□□□□ -0.52
Gm42949-201ENSMUST00000197054 Cdca7Q9D0M2 382 aa11.82□□□□□ -0.52
Gm42949-201ENSMUST00000197054 Rtn4Q99P72 1162 aaKnown RBP11.79□□□□□ -0.52
Gm42949-201ENSMUST00000197054 Tshz2Q68FE9 1030 aa11.76□□□□□ -0.53
Gm42949-201ENSMUST00000197054 Prdm10Q3UTQ7 1184 aa11.66□□□□□ -0.54
Gm42949-201ENSMUST00000197054 Chrna2Q91X60 512 aa11.66□□□□□ -0.54
Gm42949-201ENSMUST00000197054 Ecm2Q5FW85 670 aa11.59□□□□□ -0.55
Gm42949-201ENSMUST00000197054 Prm3Q62100 101 aa11.59□□□□□ -0.55
Gm42949-201ENSMUST00000197054 Rsph4aQ8BYM7 716 aa11.51□□□□□ -0.57
Gm42949-201ENSMUST00000197054 Znf219Q6IQX8 726 aa11.48□□□□□ -0.57
Gm42949-201ENSMUST00000197054 Npm2Q80W85 207 aa11.42□□□□□ -0.58
Gm42949-201ENSMUST00000197054 Rimbp2Q80U40 1072 aa11.37□□□□□ -0.59
Gm42949-201ENSMUST00000197054 Styxl1Q9DAR2 321 aa11.32□□□□□ -0.6
Gm42949-201ENSMUST00000197054 Riok3Q9DBU3 519 aaKnown RBP11.29□□□□□ -0.6
Gm42949-201ENSMUST00000197054 MyclP10166 368 aa11.27□□□□□ -0.61
Gm42949-201ENSMUST00000197054 Prdm16A2A935 1275 aa11.25□□□□□ -0.61
Gm42949-201ENSMUST00000197054 C1qtnf12Q8R2Z0 308 aa11.25□□□□□ -0.61
Gm42949-201ENSMUST00000197054 Bach1P97302 739 aa11.23□□□□□ -0.61
Gm42949-201ENSMUST00000197054 Arid3aQ62431 601 aa11.19□□□□□ -0.62
Gm42949-201ENSMUST00000197054 Taok2Q6ZQ29 1240 aa11.17□□□□□ -0.62
Gm42949-201ENSMUST00000197054 CatipB9EKE5 520 aa11.04□□□□□ -0.64
Gm42949-201ENSMUST00000197054 WdpcpQ8C456 722 aa11.01□□□□□ -0.65
Gm42949-201ENSMUST00000197054 Fam163aQ8CAA5 168 aa11.01□□□□□ -0.65
Gm42949-201ENSMUST00000197054 Ms4a5Q810P8 197 aa10.98□□□□□ -0.65
Gm42949-201ENSMUST00000197054 ArsiQ32KI9 573 aa10.9□□□□□ -0.66
Gm42949-201ENSMUST00000197054 Trim41Q5NCC3 630 aa10.87□□□□□ -0.67
Gm42949-201ENSMUST00000197054 Tcf3P15806 651 aa10.85□□□□□ -0.67
Gm42949-201ENSMUST00000197054 Slc34a2Q9DBP0 697 aa10.84□□□□□ -0.67
Gm42949-201ENSMUST00000197054 Akt1s1Q9D1F4 257 aa10.81□□□□□ -0.68
Gm42949-201ENSMUST00000197054 Sox12Q04890 314 aa10.8□□□□□ -0.68
Gm42949-201ENSMUST00000197054 Skap1Q3UUV5 355 aa10.61□□□□□ -0.71
Gm42949-201ENSMUST00000197054 Ppp6r1Q7TSI3 856 aa10.6□□□□□ -0.71
Gm42949-201ENSMUST00000197054 Vsig10D3YX43 558 aa10.56□□□□□ -0.72
Gm42949-201ENSMUST00000197054 Ppp1r37Q8BKR5 712 aa10.54□□□□□ -0.72
Gm42949-201ENSMUST00000197054 Esf1Q3V1V3 845 aaKnown RBP10.53□□□□□ -0.72
Gm42949-201ENSMUST00000197054 G430095P16RikE9Q913 147 aa10.51□□□□□ -0.73
Gm42949-201ENSMUST00000197054 MpndQ3TV65 487 aa10.51□□□□□ -0.73
Gm42949-201ENSMUST00000197054 Mkrn3Q60764 544 aa10.41□□□□□ -0.74
Gm42949-201ENSMUST00000197054 Zbtb22Q9Z0G7 638 aa10.4□□□□□ -0.74
Gm42949-201ENSMUST00000197054 Npm3Q9CPP0 175 aaKnown RBP10.38□□□□□ -0.75
Gm42949-201ENSMUST00000197054 ArxO35085 564 aa10.38□□□□□ -0.75
Gm42949-201ENSMUST00000197054 Fbln2P37889 1221 aa10.36□□□□□ -0.75
Gm42949-201ENSMUST00000197054 Spock2Q9ER58 423 aa10.36□□□□□ -0.75
Gm42949-201ENSMUST00000197054 Ifnlr1Q8CGK5 535 aa10.34□□□□□ -0.75
Gm42949-201ENSMUST00000197054 Slc4a2P13808 1237 aaKnown RBP10.31□□□□□ -0.76
Gm42949-201ENSMUST00000197054 Skida1Q80YR3 822 aa10.27□□□□□ -0.77
Gm42949-201ENSMUST00000197054 Zeb1Q64318 1117 aa10.26□□□□□ -0.77
Gm42949-201ENSMUST00000197054 Zbtb7aO88939 569 aaKnown RBP10.21□□□□□ -0.77
Gm42949-201ENSMUST00000197054 Ubap1lG3UW59 384 aa10.19□□□□□ -0.78
Gm42949-201ENSMUST00000197054 Slc24a1Q91WD8 1130 aa10.18□□□□□ -0.78
Gm42949-201ENSMUST00000197054 Ferd3lQ923Z4 168 aa10.18□□□□□ -0.78
Gm42949-201ENSMUST00000197054 Zbtb12Q9Z150 459 aa10.18□□□□□ -0.78
Gm42949-201ENSMUST00000197054 Stag3O70576 1240 aa10.17□□□□□ -0.78
Gm42949-201ENSMUST00000197054 Zbtb38Q3LR78 1197 aa10.17□□□□□ -0.78
Gm42949-201ENSMUST00000197054 TimelessQ9R1X4 1197 aa10.17□□□□□ -0.78
Gm42949-201ENSMUST00000197054 Noa1Q9JJG9 693 aaKnown RBP10.16□□□□□ -0.78
Gm42949-201ENSMUST00000197054 Spryd3E9Q9B3 442 aa10.14□□□□□ -0.79
Gm42949-201ENSMUST00000197054 MycnP03966 462 aaKnown RBP10.13□□□□□ -0.79
Gm42949-201ENSMUST00000197054 Dnajc5P60904 198 aa10.11□□□□□ -0.79
Gm42949-201ENSMUST00000197054 Gtpbp6Q3U6U5 514 aa10.11□□□□□ -0.79
Gm42949-201ENSMUST00000197054 Egfem1Q8C088 590 aa10.11□□□□□ -0.79
Gm42949-201ENSMUST00000197054 Tmem132aQ922P8 1018 aa10.11□□□□□ -0.79
Gm42949-201ENSMUST00000197054 Ttbk1Q6PCN3 1308 aa10.09□□□□□ -0.79
Gm42949-201ENSMUST00000197054 Rnf216P58283 853 aa10.08□□□□□ -0.8
Gm42949-201ENSMUST00000197054 Lrrc43Q3V0L5 667 aa10.06□□□□□ -0.8
Gm42949-201ENSMUST00000197054 Rgl2Q61193 778 aa10.06□□□□□ -0.8
Gm42949-201ENSMUST00000197054 UbtfP25976 765 aaKnown RBP10.06□□□□□ -0.8
Gm42949-201ENSMUST00000197054 P3h3Q8CG70 732 aa10.04□□□□□ -0.8
Gm42949-201ENSMUST00000197054 Ripply1Q2WG77 201 aa10.03□□□□□ -0.8
Gm42949-201ENSMUST00000197054 Abcb7Q61102 752 aaKnown RBP10.03□□□□□ -0.8
Gm42949-201ENSMUST00000197054 Jarid2Q62315 1234 aa10.01□□□□□ -0.81
Gm42949-201ENSMUST00000197054 Fam117bQ3U3E2 584 aa10.01□□□□□ -0.81
Gm42949-201ENSMUST00000197054 Grwd1Q810D6 446 aaKnown RBP9.98□□□□□ -0.81
Gm42949-201ENSMUST00000197054 UncxO08934 530 aa9.97□□□□□ -0.81
Gm42949-201ENSMUST00000197054 Repin1Q5U4E2 545 aa9.97□□□□□ -0.81
Gm42949-201ENSMUST00000197054 Map4k4P97820 1233 aaKnown RBP9.94□□□□□ -0.82
Gm42949-201ENSMUST00000197054 VaspP70460 375 aaKnown RBP9.92□□□□□ -0.82
Gm42949-201ENSMUST00000197054 Pde4dQ01063 747 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 71.2 ms