RNA–Protein interactions for RNA: ENSMUST00000195363.1

Pcdhgb4-202, Transcript of Protocadherin gamma B4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhgb4, Length 4,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4-202ENSMUST00000195363 Rhox8Q6VSS7 320 aa20.1■□□□□ 0.81
Pcdhgb4-202ENSMUST00000195363 NischQ80TM9 1593 aa19.07■□□□□ 0.64
Pcdhgb4-202ENSMUST00000195363 Rpgrip1Q9EPQ2 1331 aa18.4■□□□□ 0.54
Pcdhgb4-202ENSMUST00000195363 Abcc9P70170 1546 aa18.14■□□□□ 0.5
Pcdhgb4-202ENSMUST00000195363 Ccdc136Q3TVA9 1136 aa17.93■□□□□ 0.46
Pcdhgb4-202ENSMUST00000195363 Ehmt2Q9Z148 1263 aaKnown RBP17.93■□□□□ 0.46
Pcdhgb4-202ENSMUST00000195363 Abcc8B2RUS7 1588 aa17.87■□□□□ 0.45
Pcdhgb4-202ENSMUST00000195363 Gm35339A0A140LHH9 1649 aa17.84■□□□□ 0.45
Pcdhgb4-202ENSMUST00000195363 Esf1Q3V1V3 845 aaKnown RBP17.66■□□□□ 0.42
Pcdhgb4-202ENSMUST00000195363 Cngb1E1AZ71 1325 aa17.66■□□□□ 0.42
Pcdhgb4-202ENSMUST00000195363 Trim41Q5NCC3 630 aa17.65■□□□□ 0.42
Pcdhgb4-202ENSMUST00000195363 Gab3Q8BSM5 595 aa17.46■□□□□ 0.39
Pcdhgb4-202ENSMUST00000195363 Las1lA2BE28 776 aaKnown RBP17.41■□□□□ 0.38
Pcdhgb4-202ENSMUST00000195363 Wdr66E9Q743 1299 aa17.34■□□□□ 0.37
Pcdhgb4-202ENSMUST00000195363 Zeb1Q64318 1117 aa17.26■□□□□ 0.35
Pcdhgb4-202ENSMUST00000195363 Npm2Q80W85 207 aa17.25■□□□□ 0.35
Pcdhgb4-202ENSMUST00000195363 Acin1Q9JIX8 1338 aaKnown RBP17.17■□□□□ 0.34
Pcdhgb4-202ENSMUST00000195363 Ccdc180J3QNE4 1664 aa17.14■□□□□ 0.33
Pcdhgb4-202ENSMUST00000195363 Myt1lP97500 1187 aa17.13■□□□□ 0.33
Pcdhgb4-202ENSMUST00000195363 Ube2uB1AUC4 352 aa17.11■□□□□ 0.33
Pcdhgb4-202ENSMUST00000195363 HrcG5E8J6 738 aa17.08■□□□□ 0.32
Pcdhgb4-202ENSMUST00000195363 Rtl1Q7M732 1744 aa16.99■□□□□ 0.31
Pcdhgb4-202ENSMUST00000195363 NefmP08553 848 aa16.98■□□□□ 0.31
Pcdhgb4-202ENSMUST00000195363 Zcchc6Q5BLK4 1491 aaKnown RBP16.94■□□□□ 0.3
Pcdhgb4-202ENSMUST00000195363 UbtfP25976 765 aaKnown RBP16.85■□□□□ 0.29
Pcdhgb4-202ENSMUST00000195363 Pelp1Q9DBD5 1123 aaKnown RBP16.82■□□□□ 0.28
Pcdhgb4-202ENSMUST00000195363 NacadQ5SWP3 1504 aa16.71■□□□□ 0.27
Pcdhgb4-202ENSMUST00000195363 Rb1cc1Q9ESK9 1588 aa16.7■□□□□ 0.26
Pcdhgb4-202ENSMUST00000195363 Stra8P70278 393 aa16.57■□□□□ 0.24
Pcdhgb4-202ENSMUST00000195363 Il27Q8K3I6 234 aa16.57■□□□□ 0.24
Pcdhgb4-202ENSMUST00000195363 CenpbP27790 599 aa16.57■□□□□ 0.24
Pcdhgb4-202ENSMUST00000195363 Dcaf1Q80TR8 1506 aa16.54■□□□□ 0.24
Pcdhgb4-202ENSMUST00000195363 Kdm5dQ62240 1548 aa16.53■□□□□ 0.24
Pcdhgb4-202ENSMUST00000195363 Pcgf6Q99NA9 353 aa16.51■□□□□ 0.23
Pcdhgb4-202ENSMUST00000195363 Baz1aO88379 1555 aa16.42■□□□□ 0.22
Pcdhgb4-202ENSMUST00000195363 Cdk11bP24788 784 aaKnown RBP16.42■□□□□ 0.22
Pcdhgb4-202ENSMUST00000195363 ScribQ80U72 1612 aa16.39■□□□□ 0.21
Pcdhgb4-202ENSMUST00000195363 Slc24a1Q91WD8 1130 aa16.33■□□□□ 0.21
Pcdhgb4-202ENSMUST00000195363 Fam50aQ9WV03 339 aaKnown RBP16.31■□□□□ 0.2
Pcdhgb4-202ENSMUST00000195363 Ap3b1Q9Z1T1 1105 aa16.29■□□□□ 0.2
Pcdhgb4-202ENSMUST00000195363 Brd4Q9ESU6 1400 aaKnown RBP16.26■□□□□ 0.19
Pcdhgb4-202ENSMUST00000195363 Nop58Q6DFW4 536 aaKnown RBP16.25■□□□□ 0.19
Pcdhgb4-202ENSMUST00000195363 Supt5hO55201 1082 aaKnown RBP16.22■□□□□ 0.19
Pcdhgb4-202ENSMUST00000195363 NclP09405 707 aaKnown RBP16.21■□□□□ 0.19
Pcdhgb4-202ENSMUST00000195363 Mier1Q5UAK0 511 aa16.19■□□□□ 0.18
Pcdhgb4-202ENSMUST00000195363 TonslQ6NZL6 1363 aa16.19■□□□□ 0.18
Pcdhgb4-202ENSMUST00000195363 Tnnt3Q9QZ47 272 aa16.17■□□□□ 0.18
Pcdhgb4-202ENSMUST00000195363 Sycp2Q9CUU3 1500 aa16.14■□□□□ 0.17
Pcdhgb4-202ENSMUST00000195363 NrdcQ8BHG1 1161 aa16.12■□□□□ 0.17
Pcdhgb4-202ENSMUST00000195363 Anp32bQ9EST5 272 aaKnown RBP16.1■□□□□ 0.17
Pcdhgb4-202ENSMUST00000195363 Neurod1Q60867 357 aa16.09■□□□□ 0.17
Pcdhgb4-202ENSMUST00000195363 Ppargc1bQ8VHJ7 1014 aa16.08■□□□□ 0.16
Pcdhgb4-202ENSMUST00000195363 Npm1Q61937 292 aaKnown RBP16■□□□□ 0.15
Pcdhgb4-202ENSMUST00000195363 Crybg2B7ZCC2 1516 aa16■□□□□ 0.15
Pcdhgb4-202ENSMUST00000195363 Cep164Q5DU05 1446 aa16■□□□□ 0.15
Pcdhgb4-202ENSMUST00000195363 Plekhg3Q4VAC9 1341 aa15.97■□□□□ 0.15
Pcdhgb4-202ENSMUST00000195363 Myt1Q8CFC2 1127 aa15.95■□□□□ 0.14
Pcdhgb4-202ENSMUST00000195363 Amer1Q7TS75 1132 aa15.93■□□□□ 0.14
Pcdhgb4-202ENSMUST00000195363 ClspnQ80YR7 1315 aa15.92■□□□□ 0.14
Pcdhgb4-202ENSMUST00000195363 Lmod2Q3UHZ5 550 aa15.91■□□□□ 0.14
Pcdhgb4-202ENSMUST00000195363 Chic1Q8CBW7 227 aa15.9■□□□□ 0.14
Pcdhgb4-202ENSMUST00000195363 NeflP08551 543 aa15.88■□□□□ 0.13
Pcdhgb4-202ENSMUST00000195363 Eif5bQ05D44 1216 aaKnown RBP15.88■□□□□ 0.13
Pcdhgb4-202ENSMUST00000195363 Os9Q8K2C7 672 aa15.86■□□□□ 0.13
Pcdhgb4-202ENSMUST00000195363 Clip1Q922J3 1391 aa15.81■□□□□ 0.12
Pcdhgb4-202ENSMUST00000195363 Ubl4bQ9CQ84 188 aa15.79■□□□□ 0.12
Pcdhgb4-202ENSMUST00000195363 Golga3P55937 1487 aa15.78■□□□□ 0.12
Pcdhgb4-202ENSMUST00000195363 Smarca2Q6DIC0 1577 aa15.76■□□□□ 0.11
Pcdhgb4-202ENSMUST00000195363 Pds5bQ4VA53 1446 aaKnown RBP15.75■□□□□ 0.11
Pcdhgb4-202ENSMUST00000195363 Cecr2E9Q2Z1 1453 aa15.72■□□□□ 0.11
Pcdhgb4-202ENSMUST00000195363 Ercc6F8VPZ5 1481 aa15.69■□□□□ 0.1
Pcdhgb4-202ENSMUST00000195363 Eid3Q3V124 375 aa15.69■□□□□ 0.1
Pcdhgb4-202ENSMUST00000195363 Sall2Q9QX96 1004 aa15.69■□□□□ 0.1
Pcdhgb4-202ENSMUST00000195363 Ttbk1Q6PCN3 1308 aa15.66■□□□□ 0.1
Pcdhgb4-202ENSMUST00000195363 4933416C03RikQ3V063 378 aa15.64■□□□□ 0.09
Pcdhgb4-202ENSMUST00000195363 Rtl5Q5DTT4 599 aa15.64■□□□□ 0.09
Pcdhgb4-202ENSMUST00000195363 Ccer2J3QPU5 274 aa15.64■□□□□ 0.09
Pcdhgb4-202ENSMUST00000195363 Zbtb7cQ8VCZ7 619 aa15.64■□□□□ 0.09
Pcdhgb4-202ENSMUST00000195363 Rsf1E9PWW9 1441 aaKnown RBP15.61■□□□□ 0.09
Pcdhgb4-202ENSMUST00000195363 Hnrnpul2Q00PI9 745 aaKnown RBP15.61■□□□□ 0.09
Pcdhgb4-202ENSMUST00000195363 CftrP26361 1476 aa15.6■□□□□ 0.09
Pcdhgb4-202ENSMUST00000195363 Kif15Q6P9L6 1387 aa15.59■□□□□ 0.09
Pcdhgb4-202ENSMUST00000195363 Anks4bQ8K3X6 423 aa15.56■□□□□ 0.08
Pcdhgb4-202ENSMUST00000195363 Atad2bE9Q166 1460 aaKnown RBP15.55■□□□□ 0.08
Pcdhgb4-202ENSMUST00000195363 Anp32aO35381 247 aa15.55■□□□□ 0.08
Pcdhgb4-202ENSMUST00000195363 Mapk8ip2Q9ERE9 830 aa15.54■□□□□ 0.08
Pcdhgb4-202ENSMUST00000195363 Smarca4Q3TKT4 1613 aaKnown RBP15.51■□□□□ 0.07
Pcdhgb4-202ENSMUST00000195363 Synj1Q8CHC4 1574 aa15.49■□□□□ 0.07
Pcdhgb4-202ENSMUST00000195363 Hdac5Q9Z2V6 1113 aa15.47■□□□□ 0.07
Pcdhgb4-202ENSMUST00000195363 BlmO88700 1416 aa15.45■□□□□ 0.06
Pcdhgb4-202ENSMUST00000195363 Ccdc88bQ4QRL3 1481 aa15.43■□□□□ 0.06
Pcdhgb4-202ENSMUST00000195363 Zbtb4Q5F293 982 aa15.43■□□□□ 0.06
Pcdhgb4-202ENSMUST00000195363 Setd5Q5XJV7 1441 aa15.41■□□□□ 0.06
Pcdhgb4-202ENSMUST00000195363 Erich6D3Z6S9 713 aa15.41■□□□□ 0.06
Pcdhgb4-202ENSMUST00000195363 BicraF8VPZ9 1578 aa15.4■□□□□ 0.06
Pcdhgb4-202ENSMUST00000195363 Ifnlr1Q8CGK5 535 aa15.4■□□□□ 0.06
Pcdhgb4-202ENSMUST00000195363 Fkbp15Q6P9Q6 1216 aaKnown RBP15.4■□□□□ 0.06
Pcdhgb4-202ENSMUST00000195363 Ccdc18Q640L5 1455 aa15.4■□□□□ 0.06
Pcdhgb4-202ENSMUST00000195363 Csrnp3P59055 597 aa15.37■□□□□ 0.05
Pcdhgb4-202ENSMUST00000195363 Fmn1Q05860 1466 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms