RNA–Protein interactions for RNA: ENSMUST00000193170.1

Ccdc71-202, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-202ENSMUST00000193170 Ube2uB1AUC4 352 aa17.79■□□□□ 0.44
Ccdc71-202ENSMUST00000193170 DiexfQ8BTT6 772 aaKnown RBP17.02■□□□□ 0.31
Ccdc71-202ENSMUST00000193170 Ttbk1Q6PCN3 1308 aa16.71■□□□□ 0.27
Ccdc71-202ENSMUST00000193170 Ehmt2Q9Z148 1263 aaKnown RBP16.55■□□□□ 0.24
Ccdc71-202ENSMUST00000193170 Plppr3Q7TPB0 716 aa16.14■□□□□ 0.17
Ccdc71-202ENSMUST00000193170 Rhox8Q6VSS7 320 aa16.12■□□□□ 0.17
Ccdc71-202ENSMUST00000193170 CatipB9EKE5 520 aa16.05■□□□□ 0.16
Ccdc71-202ENSMUST00000193170 ArxO35085 564 aa16.03■□□□□ 0.16
Ccdc71-202ENSMUST00000193170 NischQ80TM9 1593 aa15.71■□□□□ 0.11
Ccdc71-202ENSMUST00000193170 Ppargc1bQ8VHJ7 1014 aa15.61■□□□□ 0.09
Ccdc71-202ENSMUST00000193170 Gm35339A0A140LHH9 1649 aa15.57■□□□□ 0.08
Ccdc71-202ENSMUST00000193170 Kcna4Q61423 654 aa15.43■□□□□ 0.06
Ccdc71-202ENSMUST00000193170 Amer1Q7TS75 1132 aa15.43■□□□□ 0.06
Ccdc71-202ENSMUST00000193170 Bcl11aQ9QYE3 773 aa15.42■□□□□ 0.06
Ccdc71-202ENSMUST00000193170 Arid3aQ62431 601 aa15.32■□□□□ 0.04
Ccdc71-202ENSMUST00000193170 Mapk8ip2Q9ERE9 830 aa15.25■□□□□ 0.03
Ccdc71-202ENSMUST00000193170 Abcc9P70170 1546 aa15.2■□□□□ 0.02
Ccdc71-202ENSMUST00000193170 UbtfP25976 765 aaKnown RBP15.18■□□□□ 0.02
Ccdc71-202ENSMUST00000193170 Slc4a1apE9PX68 744 aa15.14■□□□□ 0.01
Ccdc71-202ENSMUST00000193170 Q8BT18 775 aa15.03■□□□□ -0
Ccdc71-202ENSMUST00000193170 Prdm16A2A935 1275 aa14.96□□□□□ -0.01
Ccdc71-202ENSMUST00000193170 Aplp2Q06335 707 aa14.92□□□□□ -0.02
Ccdc71-202ENSMUST00000193170 Taok2Q6ZQ29 1240 aa14.9□□□□□ -0.02
Ccdc71-202ENSMUST00000193170 Abcc8B2RUS7 1588 aa14.86□□□□□ -0.03
Ccdc71-202ENSMUST00000193170 Prdm10Q3UTQ7 1184 aa14.86□□□□□ -0.03
Ccdc71-202ENSMUST00000193170 Rtl1Q7M732 1744 aa14.72□□□□□ -0.05
Ccdc71-202ENSMUST00000193170 Ncbp3Q8BZR9 615 aaKnown RBP14.71□□□□□ -0.05
Ccdc71-202ENSMUST00000193170 Vsig10D3YX43 558 aa14.68□□□□□ -0.06
Ccdc71-202ENSMUST00000193170 Ccdc180J3QNE4 1664 aa14.67□□□□□ -0.06
Ccdc71-202ENSMUST00000193170 Fam71e1A1L3C1 212 aa14.64□□□□□ -0.07
Ccdc71-202ENSMUST00000193170 Rsph4aQ8BYM7 716 aa14.59□□□□□ -0.07
Ccdc71-202ENSMUST00000193170 Myt1Q8CFC2 1127 aa14.59□□□□□ -0.07
Ccdc71-202ENSMUST00000193170 Gtf3c5Q8R2T8 520 aa14.58□□□□□ -0.08
Ccdc71-202ENSMUST00000193170 Rpgrip1Q9EPQ2 1331 aa14.55□□□□□ -0.08
Ccdc71-202ENSMUST00000193170 Chic1Q8CBW7 227 aa14.46□□□□□ -0.09
Ccdc71-202ENSMUST00000193170 Eif5bQ05D44 1216 aaKnown RBP14.46□□□□□ -0.1
Ccdc71-202ENSMUST00000193170 PrkcshO08795 521 aa14.44□□□□□ -0.1
Ccdc71-202ENSMUST00000193170 Acin1Q9JIX8 1338 aaKnown RBP14.42□□□□□ -0.1
Ccdc71-202ENSMUST00000193170 Zcchc6Q5BLK4 1491 aaKnown RBP14.41□□□□□ -0.1
Ccdc71-202ENSMUST00000193170 Npm2Q80W85 207 aa14.39□□□□□ -0.11
Ccdc71-202ENSMUST00000193170 TimelessQ9R1X4 1197 aa14.38□□□□□ -0.11
Ccdc71-202ENSMUST00000193170 Ripply1Q2WG77 201 aa14.36□□□□□ -0.11
Ccdc71-202ENSMUST00000193170 BccipQ9CWI3 316 aa14.35□□□□□ -0.11
Ccdc71-202ENSMUST00000193170 Pelp1Q9DBD5 1123 aaKnown RBP14.31□□□□□ -0.12
Ccdc71-202ENSMUST00000193170 4930567H17RikQ3V0K5 233 aa14.27□□□□□ -0.13
Ccdc71-202ENSMUST00000193170 Ecm2Q5FW85 670 aa14.21□□□□□ -0.13
Ccdc71-202ENSMUST00000193170 Pcgf6Q99NA9 353 aa14.19□□□□□ -0.14
Ccdc71-202ENSMUST00000193170 ScribQ80U72 1612 aa14.18□□□□□ -0.14
Ccdc71-202ENSMUST00000193170 Ccdc136Q3TVA9 1136 aa14.17□□□□□ -0.14
Ccdc71-202ENSMUST00000193170 CenpbP27790 599 aa14.12□□□□□ -0.15
Ccdc71-202ENSMUST00000193170 Os9Q8K2C7 672 aa14.09□□□□□ -0.15
Ccdc71-202ENSMUST00000193170 HrcG5E8J6 738 aa14.08□□□□□ -0.16
Ccdc71-202ENSMUST00000193170 Dcaf1Q80TR8 1506 aa14.01□□□□□ -0.17
Ccdc71-202ENSMUST00000193170 Plcd4Q8K3R3 807 aa13.99□□□□□ -0.17
Ccdc71-202ENSMUST00000193170 Znf326O88291 580 aa13.96□□□□□ -0.17
Ccdc71-202ENSMUST00000193170 Gm38655A0A286YDK6 273 aa13.93□□□□□ -0.18
Ccdc71-202ENSMUST00000193170 Supt5hO55201 1082 aaKnown RBP13.92□□□□□ -0.18
Ccdc71-202ENSMUST00000193170 Zbtb7cQ8VCZ7 619 aa13.91□□□□□ -0.18
Ccdc71-202ENSMUST00000193170 Esf1Q3V1V3 845 aaKnown RBP13.9□□□□□ -0.18
Ccdc71-202ENSMUST00000193170 Tshz2Q68FE9 1030 aa13.9□□□□□ -0.18
Ccdc71-202ENSMUST00000193170 Trim41Q5NCC3 630 aa13.88□□□□□ -0.19
Ccdc71-202ENSMUST00000193170 Pknox2Q8BG99 474 aa13.87□□□□□ -0.19
Ccdc71-202ENSMUST00000193170 Ube2q2Q8K2Z8 378 aa13.87□□□□□ -0.19
Ccdc71-202ENSMUST00000193170 AcrbpQ3V140 540 aa13.84□□□□□ -0.19
Ccdc71-202ENSMUST00000193170 Rb1cc1Q9ESK9 1588 aa13.79□□□□□ -0.2
Ccdc71-202ENSMUST00000193170 Pde4cQ3UEI1 686 aa13.78□□□□□ -0.2
Ccdc71-202ENSMUST00000193170 Igsf3Q6ZQA6 1194 aa13.77□□□□□ -0.2
Ccdc71-202ENSMUST00000193170 Znf316Q6PGE4 1016 aa13.77□□□□□ -0.21
Ccdc71-202ENSMUST00000193170 NacadQ5SWP3 1504 aa13.76□□□□□ -0.21
Ccdc71-202ENSMUST00000193170 Kdm5dQ62240 1548 aa13.76□□□□□ -0.21
Ccdc71-202ENSMUST00000193170 Phf23Q8BSN5 401 aa13.73□□□□□ -0.21
Ccdc71-202ENSMUST00000193170 Irx6Q9ER75 438 aa13.73□□□□□ -0.21
Ccdc71-202ENSMUST00000193170 Neurod1Q60867 357 aa13.7□□□□□ -0.22
Ccdc71-202ENSMUST00000193170 Samd1D3YXK1 519 aa13.69□□□□□ -0.22
Ccdc71-202ENSMUST00000193170 NefmP08553 848 aa13.68□□□□□ -0.22
Ccdc71-202ENSMUST00000193170 Scaf1Q5U4C3 1256 aaKnown RBP13.68□□□□□ -0.22
Ccdc71-202ENSMUST00000193170 Skap1Q3UUV5 355 aa13.67□□□□□ -0.22
Ccdc71-202ENSMUST00000193170 Fbxo3Q9DC63 480 aa13.66□□□□□ -0.22
Ccdc71-202ENSMUST00000193170 Zeb1Q64318 1117 aa13.64□□□□□ -0.23
Ccdc71-202ENSMUST00000193170 MyclP10166 368 aa13.63□□□□□ -0.23
Ccdc71-202ENSMUST00000193170 Cdk11bP24788 784 aaKnown RBP13.62□□□□□ -0.23
Ccdc71-202ENSMUST00000193170 Cers3Q1A3B0 383 aa13.6□□□□□ -0.23
Ccdc71-202ENSMUST00000193170 Gtf3c3Q3TMP1 882 aa13.6□□□□□ -0.23
Ccdc71-202ENSMUST00000193170 Gab3Q8BSM5 595 aa13.58□□□□□ -0.24
Ccdc71-202ENSMUST00000193170 Baz1aO88379 1555 aa13.57□□□□□ -0.24
Ccdc71-202ENSMUST00000193170 Rtn4Q99P72 1162 aaKnown RBP13.56□□□□□ -0.24
Ccdc71-202ENSMUST00000193170 Dmrt2Q8BG36 561 aa13.55□□□□□ -0.24
Ccdc71-202ENSMUST00000193170 Cep164Q5DU05 1446 aa13.53□□□□□ -0.24
Ccdc71-202ENSMUST00000193170 Podxl2Q8CAE9 603 aa13.53□□□□□ -0.24
Ccdc71-202ENSMUST00000193170 Ciz1Q8VEH2 845 aa13.5□□□□□ -0.25
Ccdc71-202ENSMUST00000193170 Stag3O70576 1240 aa13.5□□□□□ -0.25
Ccdc71-202ENSMUST00000193170 Cnksr2Q80YA9 1032 aa13.49□□□□□ -0.25
Ccdc71-202ENSMUST00000193170 Sycp2Q9CUU3 1500 aa13.48□□□□□ -0.25
Ccdc71-202ENSMUST00000193170 Arid4bA2CG63 1314 aaKnown RBP13.47□□□□□ -0.25
Ccdc71-202ENSMUST00000193170 Gm13697A2AK42 830 aa13.46□□□□□ -0.26
Ccdc71-202ENSMUST00000193170 Cngb1E1AZ71 1325 aa13.45□□□□□ -0.26
Ccdc71-202ENSMUST00000193170 Kiaa1211Q5PR69 1207 aa13.45□□□□□ -0.26
Ccdc71-202ENSMUST00000193170 Sall2Q9QX96 1004 aa13.45□□□□□ -0.26
Ccdc71-202ENSMUST00000193170 Mier1Q5UAK0 511 aa13.44□□□□□ -0.26
Ccdc71-202ENSMUST00000193170 Rad21Q61550 635 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms