RNA–Protein interactions for RNA: ENSMUST00000188544.1

Gm28178-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28178, Length 2,943 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28178-201ENSMUST00000188544 Chic1Q8CBW7 227 aa14.05□□□□□ -0.16
Gm28178-201ENSMUST00000188544 Mapk8ip2Q9ERE9 830 aa13.43□□□□□ -0.26
Gm28178-201ENSMUST00000188544 Phf23Q8BSN5 401 aa12.88□□□□□ -0.35
Gm28178-201ENSMUST00000188544 Plppr3Q7TPB0 716 aa12.61□□□□□ -0.39
Gm28178-201ENSMUST00000188544 Gm35339A0A140LHH9 1649 aa12.6□□□□□ -0.39
Gm28178-201ENSMUST00000188544 Gab3Q8BSM5 595 aa12.3□□□□□ -0.44
Gm28178-201ENSMUST00000188544 Ube2uB1AUC4 352 aa12.24□□□□□ -0.45
Gm28178-201ENSMUST00000188544 Kcna4Q61423 654 aa11.95□□□□□ -0.5
Gm28178-201ENSMUST00000188544 Senp3Q9EP97 568 aaKnown RBP11.87□□□□□ -0.51
Gm28178-201ENSMUST00000188544 NischQ80TM9 1593 aa11.62□□□□□ -0.55
Gm28178-201ENSMUST00000188544 Abcc8B2RUS7 1588 aa11.5□□□□□ -0.57
Gm28178-201ENSMUST00000188544 Abcc9P70170 1546 aa11.45□□□□□ -0.58
Gm28178-201ENSMUST00000188544 Ehmt2Q9Z148 1263 aaKnown RBP11.33□□□□□ -0.6
Gm28178-201ENSMUST00000188544 ScribQ80U72 1612 aa11.26□□□□□ -0.61
Gm28178-201ENSMUST00000188544 Ppargc1bQ8VHJ7 1014 aa11.21□□□□□ -0.62
Gm28178-201ENSMUST00000188544 GapdhsQ64467 440 aa10.92□□□□□ -0.66
Gm28178-201ENSMUST00000188544 Dcaf1Q80TR8 1506 aa10.91□□□□□ -0.66
Gm28178-201ENSMUST00000188544 NacadQ5SWP3 1504 aa10.91□□□□□ -0.66
Gm28178-201ENSMUST00000188544 Ttbk1Q6PCN3 1308 aa10.76□□□□□ -0.69
Gm28178-201ENSMUST00000188544 DiexfQ8BTT6 772 aaKnown RBP10.73□□□□□ -0.69
Gm28178-201ENSMUST00000188544 Kdm5dQ62240 1548 aa10.71□□□□□ -0.69
Gm28178-201ENSMUST00000188544 Sycp2Q9CUU3 1500 aa10.71□□□□□ -0.69
Gm28178-201ENSMUST00000188544 Baz1bQ9Z277 1479 aa10.71□□□□□ -0.7
Gm28178-201ENSMUST00000188544 Ccdc180J3QNE4 1664 aa10.67□□□□□ -0.7
Gm28178-201ENSMUST00000188544 Dmrt2Q8BG36 561 aa10.6□□□□□ -0.71
Gm28178-201ENSMUST00000188544 Thoc2B1AZI6 1594 aaKnown RBP10.56□□□□□ -0.72
Gm28178-201ENSMUST00000188544 BicraF8VPZ9 1578 aa10.55□□□□□ -0.72
Gm28178-201ENSMUST00000188544 ArxO35085 564 aa10.53□□□□□ -0.72
Gm28178-201ENSMUST00000188544 Crybg2B7ZCC2 1516 aa10.48□□□□□ -0.73
Gm28178-201ENSMUST00000188544 Fam71e1A1L3C1 212 aa10.46□□□□□ -0.74
Gm28178-201ENSMUST00000188544 Trap1aP19473 224 aa10.42□□□□□ -0.74
Gm28178-201ENSMUST00000188544 Arid3aQ62431 601 aa10.4□□□□□ -0.74
Gm28178-201ENSMUST00000188544 Dnajc5bQ9CQ94 199 aa10.36□□□□□ -0.75
Gm28178-201ENSMUST00000188544 Pds5bQ4VA53 1446 aaKnown RBP10.34□□□□□ -0.75
Gm28178-201ENSMUST00000188544 Prdm10Q3UTQ7 1184 aa10.3□□□□□ -0.76
Gm28178-201ENSMUST00000188544 Prdm16A2A935 1275 aa10.29□□□□□ -0.76
Gm28178-201ENSMUST00000188544 Fam135aQ6NS59 1506 aa10.27□□□□□ -0.77
Gm28178-201ENSMUST00000188544 Hoxd11P23813 323 aa10.25□□□□□ -0.77
Gm28178-201ENSMUST00000188544 Slc4a1apE9PX68 744 aa10.23□□□□□ -0.77
Gm28178-201ENSMUST00000188544 Taok2Q6ZQ29 1240 aa10.2□□□□□ -0.78
Gm28178-201ENSMUST00000188544 Smarca2Q6DIC0 1577 aa10.19□□□□□ -0.78
Gm28178-201ENSMUST00000188544 Atad2bE9Q166 1460 aaKnown RBP10.18□□□□□ -0.78
Gm28178-201ENSMUST00000188544 CatipB9EKE5 520 aa10.14□□□□□ -0.79
Gm28178-201ENSMUST00000188544 Fam163aQ8CAA5 168 aa10.13□□□□□ -0.79
Gm28178-201ENSMUST00000188544 Rhox8Q6VSS7 320 aa10.12□□□□□ -0.79
Gm28178-201ENSMUST00000188544 Rb1cc1Q9ESK9 1588 aa10.12□□□□□ -0.79
Gm28178-201ENSMUST00000188544 Atf5O70191 283 aa10.11□□□□□ -0.79
Gm28178-201ENSMUST00000188544 Baz1aO88379 1555 aa10.07□□□□□ -0.8
Gm28178-201ENSMUST00000188544 UbtfP25976 765 aaKnown RBP10.06□□□□□ -0.8
Gm28178-201ENSMUST00000188544 Cc2d2aQ8CFW7 1633 aa10.02□□□□□ -0.8
Gm28178-201ENSMUST00000188544 Npm2Q80W85 207 aa10□□□□□ -0.81
Gm28178-201ENSMUST00000188544 Ecm2Q5FW85 670 aa9.97□□□□□ -0.81
Gm28178-201ENSMUST00000188544 Smarca4Q3TKT4 1613 aaKnown RBP9.97□□□□□ -0.81
Gm28178-201ENSMUST00000188544 Ercc6F8VPZ5 1481 aa9.96□□□□□ -0.82
Gm28178-201ENSMUST00000188544 Wdr62Q3U3T8 1523 aa9.95□□□□□ -0.82
Gm28178-201ENSMUST00000188544 Pde4cQ3UEI1 686 aa9.9□□□□□ -0.82
Gm28178-201ENSMUST00000188544 Vsig10D3YX43 558 aa9.89□□□□□ -0.83
Gm28178-201ENSMUST00000188544 Tshz2Q68FE9 1030 aa9.89□□□□□ -0.83
Gm28178-201ENSMUST00000188544 AcrbpQ3V140 540 aa9.88□□□□□ -0.83
Gm28178-201ENSMUST00000188544 Iqgap2Q3UQ44 1575 aa9.87□□□□□ -0.83
Gm28178-201ENSMUST00000188544 Phldb1Q6PDH0 1371 aaKnown RBP9.81□□□□□ -0.84
Gm28178-201ENSMUST00000188544 Chrna2Q91X60 512 aa9.81□□□□□ -0.84
Gm28178-201ENSMUST00000188544 Frmpd1A2AKB4 1549 aa9.79□□□□□ -0.84
Gm28178-201ENSMUST00000188544 Ppp4r2Q0VGB7 417 aa9.79□□□□□ -0.84
Gm28178-201ENSMUST00000188544 Unc13aQ4KUS2 1712 aa9.78□□□□□ -0.84
Gm28178-201ENSMUST00000188544 Dnajc5P60904 198 aa9.77□□□□□ -0.85
Gm28178-201ENSMUST00000188544 Bcl11aQ9QYE3 773 aa9.76□□□□□ -0.85
Gm28178-201ENSMUST00000188544 1700123L14RikQ3V2K7 440 aa9.76□□□□□ -0.85
Gm28178-201ENSMUST00000188544 Trim41Q5NCC3 630 aa9.75□□□□□ -0.85
Gm28178-201ENSMUST00000188544 Znf219Q6IQX8 726 aa9.73□□□□□ -0.85
Gm28178-201ENSMUST00000188544 Shroom2A2ALU4 1481 aa9.73□□□□□ -0.85
Gm28178-201ENSMUST00000188544 Mrc2Q64449 1479 aa9.73□□□□□ -0.85
Gm28178-201ENSMUST00000188544 Rsph4aQ8BYM7 716 aa9.71□□□□□ -0.86
Gm28178-201ENSMUST00000188544 Zcchc6Q5BLK4 1491 aaKnown RBP9.69□□□□□ -0.86
Gm28178-201ENSMUST00000188544 Hs6st3Q9QYK4 470 aa9.69□□□□□ -0.86
Gm28178-201ENSMUST00000188544 Q8BT18 775 aa9.69□□□□□ -0.86
Gm28178-201ENSMUST00000188544 Rtn4Q99P72 1162 aaKnown RBP9.69□□□□□ -0.86
Gm28178-201ENSMUST00000188544 Nlrp6Q91WS2 869 aa9.66□□□□□ -0.86
Gm28178-201ENSMUST00000188544 Rimbp2Q80U40 1072 aa9.64□□□□□ -0.87
Gm28178-201ENSMUST00000188544 Eif4g3Q80XI3 1579 aaKnown RBP9.62□□□□□ -0.87
Gm28178-201ENSMUST00000188544 Cttnbp2B9EJA2 1648 aa9.6□□□□□ -0.87
Gm28178-201ENSMUST00000188544 Rsf1E9PWW9 1441 aaKnown RBP9.59□□□□□ -0.87
Gm28178-201ENSMUST00000188544 Ripply1Q2WG77 201 aa9.59□□□□□ -0.87
Gm28178-201ENSMUST00000188544 Zcchc11B2RX14 1644 aaKnown RBP9.59□□□□□ -0.87
Gm28178-201ENSMUST00000188544 Ccdc136Q3TVA9 1136 aa9.56□□□□□ -0.88
Gm28178-201ENSMUST00000188544 Lrriq1Q0P5X1 1673 aa9.55□□□□□ -0.88
Gm28178-201ENSMUST00000188544 Gpatch8A2A6A1 1505 aa9.54□□□□□ -0.88
Gm28178-201ENSMUST00000188544 Esf1Q3V1V3 845 aaKnown RBP9.53□□□□□ -0.88
Gm28178-201ENSMUST00000188544 Cecr2E9Q2Z1 1453 aa9.47□□□□□ -0.89
Gm28178-201ENSMUST00000188544 Col17a1Q07563 1470 aa9.45□□□□□ -0.9
Gm28178-201ENSMUST00000188544 Bach1P97302 739 aa9.45□□□□□ -0.9
Gm28178-201ENSMUST00000188544 Ubl4bQ9CQ84 188 aa9.45□□□□□ -0.9
Gm28178-201ENSMUST00000188544 Ncbp3Q8BZR9 615 aaKnown RBP9.44□□□□□ -0.9
Gm28178-201ENSMUST00000188544 Lamc3Q9R0B6 1581 aa9.44□□□□□ -0.9
Gm28178-201ENSMUST00000188544 Cdca7Q9D0M2 382 aa9.42□□□□□ -0.9
Gm28178-201ENSMUST00000188544 CftrP26361 1476 aa9.41□□□□□ -0.9
Gm28178-201ENSMUST00000188544 Os9Q8K2C7 672 aa9.41□□□□□ -0.9
Gm28178-201ENSMUST00000188544 Prm3Q62100 101 aa9.4□□□□□ -0.9
Gm28178-201ENSMUST00000188544 PrkcshO08795 521 aa9.38□□□□□ -0.91
Gm28178-201ENSMUST00000188544 Pelp1Q9DBD5 1123 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms