RNA–Protein interactions for RNA: ENSMUST00000185494.1

Gm28653-201, mousemouse

BASIC

Gene Gm28653, Length 5,276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28653-201ENSMUST00000185494 Rpgrip1Q9EPQ2 1331 aa15.32■□□□□ 0.04
Gm28653-201ENSMUST00000185494 Rhox8Q6VSS7 320 aa15□□□□□ -0.01
Gm28653-201ENSMUST00000185494 NischQ80TM9 1593 aa14.71□□□□□ -0.05
Gm28653-201ENSMUST00000185494 Las1lA2BE28 776 aaKnown RBP14.5□□□□□ -0.09
Gm28653-201ENSMUST00000185494 Acin1Q9JIX8 1338 aaKnown RBP14.2□□□□□ -0.14
Gm28653-201ENSMUST00000185494 Ehmt2Q9Z148 1263 aaKnown RBP14.15□□□□□ -0.14
Gm28653-201ENSMUST00000185494 Cngb1E1AZ71 1325 aa14.14□□□□□ -0.15
Gm28653-201ENSMUST00000185494 Rtl1Q7M732 1744 aa14.09□□□□□ -0.15
Gm28653-201ENSMUST00000185494 Ccdc180J3QNE4 1664 aa14.05□□□□□ -0.16
Gm28653-201ENSMUST00000185494 Abcc9P70170 1546 aa13.93□□□□□ -0.18
Gm28653-201ENSMUST00000185494 Myt1Q8CFC2 1127 aa13.85□□□□□ -0.19
Gm28653-201ENSMUST00000185494 Pcgf6Q99NA9 353 aa13.82□□□□□ -0.2
Gm28653-201ENSMUST00000185494 CenpbP27790 599 aa13.77□□□□□ -0.2
Gm28653-201ENSMUST00000185494 Gm35339A0A140LHH9 1649 aa13.77□□□□□ -0.2
Gm28653-201ENSMUST00000185494 Abcc8B2RUS7 1588 aa13.77□□□□□ -0.21
Gm28653-201ENSMUST00000185494 Zeb1Q64318 1117 aa13.73□□□□□ -0.21
Gm28653-201ENSMUST00000185494 Pelp1Q9DBD5 1123 aaKnown RBP13.72□□□□□ -0.21
Gm28653-201ENSMUST00000185494 Wdr66E9Q743 1299 aa13.68□□□□□ -0.22
Gm28653-201ENSMUST00000185494 NefmP08553 848 aa13.56□□□□□ -0.24
Gm28653-201ENSMUST00000185494 HrcG5E8J6 738 aa13.47□□□□□ -0.25
Gm28653-201ENSMUST00000185494 Esf1Q3V1V3 845 aaKnown RBP13.46□□□□□ -0.25
Gm28653-201ENSMUST00000185494 Trim41Q5NCC3 630 aa13.42□□□□□ -0.26
Gm28653-201ENSMUST00000185494 Ccdc136Q3TVA9 1136 aa13.42□□□□□ -0.26
Gm28653-201ENSMUST00000185494 Supt5hO55201 1082 aaKnown RBP13.4□□□□□ -0.26
Gm28653-201ENSMUST00000185494 Cdk11bP24788 784 aaKnown RBP13.31□□□□□ -0.28
Gm28653-201ENSMUST00000185494 DiexfQ8BTT6 772 aaKnown RBP13.27□□□□□ -0.29
Gm28653-201ENSMUST00000185494 Dcaf1Q80TR8 1506 aa13.21□□□□□ -0.29
Gm28653-201ENSMUST00000185494 Neurod1Q60867 357 aa13.19□□□□□ -0.3
Gm28653-201ENSMUST00000185494 Gab3Q8BSM5 595 aa13.19□□□□□ -0.3
Gm28653-201ENSMUST00000185494 Amer1Q7TS75 1132 aa13.18□□□□□ -0.3
Gm28653-201ENSMUST00000185494 Stra8P70278 393 aa13.17□□□□□ -0.3
Gm28653-201ENSMUST00000185494 Zcchc6Q5BLK4 1491 aaKnown RBP13.16□□□□□ -0.3
Gm28653-201ENSMUST00000185494 Tnnt3Q9QZ47 272 aa13.16□□□□□ -0.3
Gm28653-201ENSMUST00000185494 Nop58Q6DFW4 536 aaKnown RBP13.15□□□□□ -0.3
Gm28653-201ENSMUST00000185494 NacadQ5SWP3 1504 aa13.14□□□□□ -0.31
Gm28653-201ENSMUST00000185494 Rtl5Q5DTT4 599 aa13.09□□□□□ -0.31
Gm28653-201ENSMUST00000185494 Anks4bQ8K3X6 423 aa13.05□□□□□ -0.32
Gm28653-201ENSMUST00000185494 Aplp2Q06335 707 aa13.01□□□□□ -0.33
Gm28653-201ENSMUST00000185494 UbtfP25976 765 aaKnown RBP12.96□□□□□ -0.33
Gm28653-201ENSMUST00000185494 Csrnp3P59055 597 aa12.94□□□□□ -0.34
Gm28653-201ENSMUST00000185494 ClspnQ80YR7 1315 aa12.88□□□□□ -0.35
Gm28653-201ENSMUST00000185494 Mier1Q5UAK0 511 aa12.88□□□□□ -0.35
Gm28653-201ENSMUST00000185494 Rb1cc1Q9ESK9 1588 aa12.88□□□□□ -0.35
Gm28653-201ENSMUST00000185494 Npm2Q80W85 207 aa12.87□□□□□ -0.35
Gm28653-201ENSMUST00000185494 Ttbk1Q6PCN3 1308 aa12.83□□□□□ -0.36
Gm28653-201ENSMUST00000185494 Anp32aO35381 247 aa12.82□□□□□ -0.36
Gm28653-201ENSMUST00000185494 TonslQ6NZL6 1363 aa12.81□□□□□ -0.36
Gm28653-201ENSMUST00000185494 1700123L14RikQ3V2K7 440 aa12.81□□□□□ -0.36
Gm28653-201ENSMUST00000185494 Sall2Q9QX96 1004 aa12.81□□□□□ -0.36
Gm28653-201ENSMUST00000185494 Myt1lP97500 1187 aa12.79□□□□□ -0.36
Gm28653-201ENSMUST00000185494 Kdm5dQ62240 1548 aa12.79□□□□□ -0.36
Gm28653-201ENSMUST00000185494 Ube2uB1AUC4 352 aa12.72□□□□□ -0.37
Gm28653-201ENSMUST00000185494 4933416C03RikQ3V063 378 aa12.72□□□□□ -0.37
Gm28653-201ENSMUST00000185494 Brd4Q9ESU6 1400 aaKnown RBP12.71□□□□□ -0.37
Gm28653-201ENSMUST00000185494 Il27Q8K3I6 234 aa12.7□□□□□ -0.38
Gm28653-201ENSMUST00000185494 Ppargc1bQ8VHJ7 1014 aa12.68□□□□□ -0.38
Gm28653-201ENSMUST00000185494 Baz1aO88379 1555 aa12.68□□□□□ -0.38
Gm28653-201ENSMUST00000185494 Slc24a1Q91WD8 1130 aa12.68□□□□□ -0.38
Gm28653-201ENSMUST00000185494 Cep164Q5DU05 1446 aa12.68□□□□□ -0.38
Gm28653-201ENSMUST00000185494 Npm1Q61937 292 aaKnown RBP12.66□□□□□ -0.38
Gm28653-201ENSMUST00000185494 Gm38655A0A286YDK6 273 aa12.66□□□□□ -0.38
Gm28653-201ENSMUST00000185494 Bcl11aQ9QYE3 773 aa12.61□□□□□ -0.39
Gm28653-201ENSMUST00000185494 Sycp2Q9CUU3 1500 aa12.6□□□□□ -0.39
Gm28653-201ENSMUST00000185494 Pds5bQ4VA53 1446 aaKnown RBP12.59□□□□□ -0.39
Gm28653-201ENSMUST00000185494 Ercc6F8VPZ5 1481 aa12.58□□□□□ -0.39
Gm28653-201ENSMUST00000185494 Ubl4bQ9CQ84 188 aa12.56□□□□□ -0.4
Gm28653-201ENSMUST00000185494 ScribQ80U72 1612 aa12.55□□□□□ -0.4
Gm28653-201ENSMUST00000185494 NclP09405 707 aaKnown RBP12.53□□□□□ -0.4
Gm28653-201ENSMUST00000185494 NrdcQ8BHG1 1161 aa12.52□□□□□ -0.4
Gm28653-201ENSMUST00000185494 Eif5bQ05D44 1216 aaKnown RBP12.51□□□□□ -0.41
Gm28653-201ENSMUST00000185494 Crybg2B7ZCC2 1516 aa12.49□□□□□ -0.41
Gm28653-201ENSMUST00000185494 Fam71e1A1L3C1 212 aa12.47□□□□□ -0.41
Gm28653-201ENSMUST00000185494 NeflP08551 543 aa12.46□□□□□ -0.41
Gm28653-201ENSMUST00000185494 Ccdc9Q8VC31 543 aaKnown RBP12.46□□□□□ -0.42
Gm28653-201ENSMUST00000185494 4930567H17RikQ3V0K5 233 aa12.41□□□□□ -0.42
Gm28653-201ENSMUST00000185494 Calr4Q3TQS0 420 aa12.39□□□□□ -0.43
Gm28653-201ENSMUST00000185494 Mapk8ip2Q9ERE9 830 aa12.37□□□□□ -0.43
Gm28653-201ENSMUST00000185494 DaxxO35613 739 aa12.34□□□□□ -0.43
Gm28653-201ENSMUST00000185494 Rsf1E9PWW9 1441 aaKnown RBP12.33□□□□□ -0.44
Gm28653-201ENSMUST00000185494 Fam50aQ9WV03 339 aaKnown RBP12.31□□□□□ -0.44
Gm28653-201ENSMUST00000185494 Aebp2Q9Z248 504 aaKnown RBP12.31□□□□□ -0.44
Gm28653-201ENSMUST00000185494 Anp32bQ9EST5 272 aaKnown RBP12.3□□□□□ -0.44
Gm28653-201ENSMUST00000185494 Hsp90aa1P07901 733 aaKnown RBP12.29□□□□□ -0.44
Gm28653-201ENSMUST00000185494 Atad2bE9Q166 1460 aaKnown RBP12.29□□□□□ -0.44
Gm28653-201ENSMUST00000185494 Ap3b1Q9Z1T1 1105 aa12.27□□□□□ -0.44
Gm28653-201ENSMUST00000185494 Ppp4r2Q0VGB7 417 aa12.27□□□□□ -0.44
Gm28653-201ENSMUST00000185494 Wdr43Q6ZQL4 677 aaKnown RBP12.27□□□□□ -0.45
Gm28653-201ENSMUST00000185494 Kif15Q6P9L6 1387 aa12.23□□□□□ -0.45
Gm28653-201ENSMUST00000185494 Ccdc27Q3V036 639 aa12.21□□□□□ -0.46
Gm28653-201ENSMUST00000185494 Chic1Q8CBW7 227 aa12.2□□□□□ -0.46
Gm28653-201ENSMUST00000185494 Plekhg3Q4VAC9 1341 aa12.2□□□□□ -0.46
Gm28653-201ENSMUST00000185494 Ccdc18Q640L5 1455 aa12.19□□□□□ -0.46
Gm28653-201ENSMUST00000185494 Hnrnpul2Q00PI9 745 aaKnown RBP12.18□□□□□ -0.46
Gm28653-201ENSMUST00000185494 Phldb1Q6PDH0 1371 aaKnown RBP12.17□□□□□ -0.46
Gm28653-201ENSMUST00000185494 Golga3P55937 1487 aa12.14□□□□□ -0.47
Gm28653-201ENSMUST00000185494 Clip1Q922J3 1391 aa12.13□□□□□ -0.47
Gm28653-201ENSMUST00000185494 SafbD3YXK2 937 aaKnown RBP12.12□□□□□ -0.47
Gm28653-201ENSMUST00000185494 Smarca4Q3TKT4 1613 aaKnown RBP12.11□□□□□ -0.47
Gm28653-201ENSMUST00000185494 Irx3P81067 507 aa12.1□□□□□ -0.47
Gm28653-201ENSMUST00000185494 Eid3Q3V124 375 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms