RNA–Protein interactions for RNA: ENSMUST00000170391.1

Chd7-206, Transcript of Chromodomain-helicase-DNA-binding protein 7, mousemouse

TSL 5 BASIC

Gene Chd7, Length 3,462 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7-206ENSMUST00000170391 NischQ80TM9 1593 aa19.81■□□□□ 0.76
Chd7-206ENSMUST00000170391 Gm35339A0A140LHH9 1649 aa19.12■□□□□ 0.65
Chd7-206ENSMUST00000170391 Abcc9P70170 1546 aa19.12■□□□□ 0.65
Chd7-206ENSMUST00000170391 Rhox8Q6VSS7 320 aa18.95■□□□□ 0.62
Chd7-206ENSMUST00000170391 Abcc8B2RUS7 1588 aa18.7■□□□□ 0.58
Chd7-206ENSMUST00000170391 Rpgrip1Q9EPQ2 1331 aa18.43■□□□□ 0.54
Chd7-206ENSMUST00000170391 Rtl1Q7M732 1744 aa18.05■□□□□ 0.48
Chd7-206ENSMUST00000170391 Ehmt2Q9Z148 1263 aaKnown RBP17.91■□□□□ 0.46
Chd7-206ENSMUST00000170391 Ccdc180J3QNE4 1664 aa17.84■□□□□ 0.45
Chd7-206ENSMUST00000170391 Acin1Q9JIX8 1338 aaKnown RBP17.82■□□□□ 0.44
Chd7-206ENSMUST00000170391 Pcgf6Q99NA9 353 aa17.69■□□□□ 0.42
Chd7-206ENSMUST00000170391 Ccdc136Q3TVA9 1136 aa17.52■□□□□ 0.4
Chd7-206ENSMUST00000170391 Zcchc6Q5BLK4 1491 aaKnown RBP17.42■□□□□ 0.38
Chd7-206ENSMUST00000170391 ScribQ80U72 1612 aa17.4■□□□□ 0.38
Chd7-206ENSMUST00000170391 Rb1cc1Q9ESK9 1588 aa17.38■□□□□ 0.37
Chd7-206ENSMUST00000170391 Dcaf1Q80TR8 1506 aa17.28■□□□□ 0.36
Chd7-206ENSMUST00000170391 Supt5hO55201 1082 aaKnown RBP17.22■□□□□ 0.35
Chd7-206ENSMUST00000170391 Kdm5dQ62240 1548 aa17.18■□□□□ 0.34
Chd7-206ENSMUST00000170391 Las1lA2BE28 776 aaKnown RBP17.12■□□□□ 0.33
Chd7-206ENSMUST00000170391 Baz1aO88379 1555 aa17.11■□□□□ 0.33
Chd7-206ENSMUST00000170391 Neurod1Q60867 357 aa17.09■□□□□ 0.33
Chd7-206ENSMUST00000170391 HrcG5E8J6 738 aa17.07■□□□□ 0.32
Chd7-206ENSMUST00000170391 Trim41Q5NCC3 630 aa17.02■□□□□ 0.32
Chd7-206ENSMUST00000170391 NacadQ5SWP3 1504 aa16.99■□□□□ 0.31
Chd7-206ENSMUST00000170391 Zeb1Q64318 1117 aa16.94■□□□□ 0.3
Chd7-206ENSMUST00000170391 Cngb1E1AZ71 1325 aa16.78■□□□□ 0.28
Chd7-206ENSMUST00000170391 1700123L14RikQ3V2K7 440 aa16.72■□□□□ 0.27
Chd7-206ENSMUST00000170391 Smarca2Q6DIC0 1577 aa16.68■□□□□ 0.26
Chd7-206ENSMUST00000170391 CenpbP27790 599 aa16.66■□□□□ 0.26
Chd7-206ENSMUST00000170391 Gab3Q8BSM5 595 aa16.66■□□□□ 0.26
Chd7-206ENSMUST00000170391 Csrnp3P59055 597 aa16.63■□□□□ 0.25
Chd7-206ENSMUST00000170391 Sycp2Q9CUU3 1500 aa16.6■□□□□ 0.25
Chd7-206ENSMUST00000170391 DiexfQ8BTT6 772 aaKnown RBP16.59■□□□□ 0.25
Chd7-206ENSMUST00000170391 Crybg2B7ZCC2 1516 aa16.59■□□□□ 0.25
Chd7-206ENSMUST00000170391 Cep164Q5DU05 1446 aa16.56■□□□□ 0.24
Chd7-206ENSMUST00000170391 Esf1Q3V1V3 845 aaKnown RBP16.52■□□□□ 0.23
Chd7-206ENSMUST00000170391 Chic1Q8CBW7 227 aa16.51■□□□□ 0.23
Chd7-206ENSMUST00000170391 Myt1Q8CFC2 1127 aa16.49■□□□□ 0.23
Chd7-206ENSMUST00000170391 Sall2Q9QX96 1004 aa16.49■□□□□ 0.23
Chd7-206ENSMUST00000170391 Wdr66E9Q743 1299 aa16.46■□□□□ 0.23
Chd7-206ENSMUST00000170391 Anks4bQ8K3X6 423 aa16.46■□□□□ 0.23
Chd7-206ENSMUST00000170391 Brd4Q9ESU6 1400 aaKnown RBP16.44■□□□□ 0.22
Chd7-206ENSMUST00000170391 Gm38655A0A286YDK6 273 aa16.44■□□□□ 0.22
Chd7-206ENSMUST00000170391 Cecr2E9Q2Z1 1453 aa16.42■□□□□ 0.22
Chd7-206ENSMUST00000170391 NefmP08553 848 aa16.41■□□□□ 0.22
Chd7-206ENSMUST00000170391 Rsf1E9PWW9 1441 aaKnown RBP16.4■□□□□ 0.22
Chd7-206ENSMUST00000170391 Bcl11aQ9QYE3 773 aa16.32■□□□□ 0.2
Chd7-206ENSMUST00000170391 Cdk11bP24788 784 aaKnown RBP16.29■□□□□ 0.2
Chd7-206ENSMUST00000170391 Ccdc88bQ4QRL3 1481 aa16.29■□□□□ 0.2
Chd7-206ENSMUST00000170391 Golga3P55937 1487 aa16.28■□□□□ 0.2
Chd7-206ENSMUST00000170391 Ppargc1bQ8VHJ7 1014 aa16.27■□□□□ 0.19
Chd7-206ENSMUST00000170391 Synj1Q8CHC4 1574 aa16.26■□□□□ 0.19
Chd7-206ENSMUST00000170391 Mier1Q5UAK0 511 aa16.26■□□□□ 0.19
Chd7-206ENSMUST00000170391 Aplp2Q06335 707 aa16.25■□□□□ 0.19
Chd7-206ENSMUST00000170391 Nop58Q6DFW4 536 aaKnown RBP16.23■□□□□ 0.19
Chd7-206ENSMUST00000170391 BicraF8VPZ9 1578 aa16.21■□□□□ 0.19
Chd7-206ENSMUST00000170391 PrkcshO08795 521 aa16.14■□□□□ 0.17
Chd7-206ENSMUST00000170391 CftrP26361 1476 aa16.13■□□□□ 0.17
Chd7-206ENSMUST00000170391 Myt1lP97500 1187 aa16.06■□□□□ 0.16
Chd7-206ENSMUST00000170391 Aebp2Q9Z248 504 aaKnown RBP16.02■□□□□ 0.16
Chd7-206ENSMUST00000170391 UbtfP25976 765 aaKnown RBP16■□□□□ 0.15
Chd7-206ENSMUST00000170391 Ifnlr1Q8CGK5 535 aa16■□□□□ 0.15
Chd7-206ENSMUST00000170391 Cttnbp2B9EJA2 1648 aa15.99■□□□□ 0.15
Chd7-206ENSMUST00000170391 Npm2Q80W85 207 aa15.98■□□□□ 0.15
Chd7-206ENSMUST00000170391 Smarca4Q3TKT4 1613 aaKnown RBP15.94■□□□□ 0.14
Chd7-206ENSMUST00000170391 Cc2d2aQ8CFW7 1633 aa15.94■□□□□ 0.14
Chd7-206ENSMUST00000170391 ClspnQ80YR7 1315 aa15.93■□□□□ 0.14
Chd7-206ENSMUST00000170391 Top2bQ64511 1612 aa15.92■□□□□ 0.14
Chd7-206ENSMUST00000170391 Fam71e1A1L3C1 212 aa15.89■□□□□ 0.13
Chd7-206ENSMUST00000170391 Mapk8ip2Q9ERE9 830 aa15.88■□□□□ 0.13
Chd7-206ENSMUST00000170391 Fmn1Q05860 1466 aa15.8■□□□□ 0.12
Chd7-206ENSMUST00000170391 Il27Q8K3I6 234 aa15.77■□□□□ 0.12
Chd7-206ENSMUST00000170391 SafbD3YXK2 937 aaKnown RBP15.76■□□□□ 0.11
Chd7-206ENSMUST00000170391 Iqgap2Q3UQ44 1575 aa15.75■□□□□ 0.11
Chd7-206ENSMUST00000170391 Rapgef2Q8CHG7 1496 aa15.73■□□□□ 0.11
Chd7-206ENSMUST00000170391 Plekhg3Q4VAC9 1341 aa15.71■□□□□ 0.11
Chd7-206ENSMUST00000170391 Cep162Q6ZQ06 1403 aa15.7■□□□□ 0.1
Chd7-206ENSMUST00000170391 Top2aQ01320 1528 aaKnown RBP15.69■□□□□ 0.1
Chd7-206ENSMUST00000170391 TonslQ6NZL6 1363 aa15.69■□□□□ 0.1
Chd7-206ENSMUST00000170391 Amer1Q7TS75 1132 aa15.68■□□□□ 0.1
Chd7-206ENSMUST00000170391 Hnrnpul2Q00PI9 745 aaKnown RBP15.67■□□□□ 0.1
Chd7-206ENSMUST00000170391 Tnnt3Q9QZ47 272 aa15.66■□□□□ 0.1
Chd7-206ENSMUST00000170391 Ap3b1Q9Z1T1 1105 aa15.63■□□□□ 0.09
Chd7-206ENSMUST00000170391 Clip1Q922J3 1391 aa15.63■□□□□ 0.09
Chd7-206ENSMUST00000170391 Atad2bE9Q166 1460 aaKnown RBP15.63■□□□□ 0.09
Chd7-206ENSMUST00000170391 Pds5bQ4VA53 1446 aaKnown RBP15.57■□□□□ 0.08
Chd7-206ENSMUST00000170391 Pelp1Q9DBD5 1123 aaKnown RBP15.55■□□□□ 0.08
Chd7-206ENSMUST00000170391 Ttbk1Q6PCN3 1308 aa15.55■□□□□ 0.08
Chd7-206ENSMUST00000170391 Anp32aO35381 247 aa15.53■□□□□ 0.08
Chd7-206ENSMUST00000170391 Kif15Q6P9L6 1387 aa15.5■□□□□ 0.07
Chd7-206ENSMUST00000170391 Frmpd1A2AKB4 1549 aa15.43■□□□□ 0.06
Chd7-206ENSMUST00000170391 PtprkP35822 1457 aa15.41■□□□□ 0.06
Chd7-206ENSMUST00000170391 Ercc6F8VPZ5 1481 aa15.4■□□□□ 0.06
Chd7-206ENSMUST00000170391 Rtl5Q5DTT4 599 aa15.39■□□□□ 0.05
Chd7-206ENSMUST00000170391 Arhgap35Q91YM2 1499 aa15.37■□□□□ 0.05
Chd7-206ENSMUST00000170391 Setd5Q5XJV7 1441 aa15.37■□□□□ 0.05
Chd7-206ENSMUST00000170391 Eid3Q3V124 375 aa15.37■□□□□ 0.05
Chd7-206ENSMUST00000170391 Wdr62Q3U3T8 1523 aa15.36■□□□□ 0.05
Chd7-206ENSMUST00000170391 Eea1Q8BL66 1411 aa15.36■□□□□ 0.05
Chd7-206ENSMUST00000170391 Slc24a1Q91WD8 1130 aa15.35■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms