RNA–Protein interactions for RNA: ENSMUST00000159879.1

Trove2-202, Transcript of 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trove2, Length 8,738 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2-202ENSMUST00000159879 Rpgrip1Q9EPQ2 1331 aa11.09□□□□□ -0.63
Trove2-202ENSMUST00000159879 Rhox8Q6VSS7 320 aa10.92□□□□□ -0.66
Trove2-202ENSMUST00000159879 Las1lA2BE28 776 aaKnown RBP10.61□□□□□ -0.71
Trove2-202ENSMUST00000159879 Cngb1E1AZ71 1325 aa10.5□□□□□ -0.73
Trove2-202ENSMUST00000159879 Rtl1Q7M732 1744 aa10.45□□□□□ -0.74
Trove2-202ENSMUST00000159879 Pelp1Q9DBD5 1123 aaKnown RBP10.26□□□□□ -0.77
Trove2-202ENSMUST00000159879 Ccdc180J3QNE4 1664 aa10.24□□□□□ -0.77
Trove2-202ENSMUST00000159879 Ehmt2Q9Z148 1263 aaKnown RBP10.07□□□□□ -0.8
Trove2-202ENSMUST00000159879 Acin1Q9JIX8 1338 aaKnown RBP10.06□□□□□ -0.8
Trove2-202ENSMUST00000159879 NischQ80TM9 1593 aa10.03□□□□□ -0.8
Trove2-202ENSMUST00000159879 Myt1Q8CFC2 1127 aa10.02□□□□□ -0.81
Trove2-202ENSMUST00000159879 CenpbP27790 599 aa10□□□□□ -0.81
Trove2-202ENSMUST00000159879 Wdr66E9Q743 1299 aa9.96□□□□□ -0.81
Trove2-202ENSMUST00000159879 Zeb1Q64318 1117 aa9.91□□□□□ -0.82
Trove2-202ENSMUST00000159879 NefmP08553 848 aa9.82□□□□□ -0.84
Trove2-202ENSMUST00000159879 Gm35339A0A140LHH9 1649 aa9.81□□□□□ -0.84
Trove2-202ENSMUST00000159879 Ccdc136Q3TVA9 1136 aa9.77□□□□□ -0.84
Trove2-202ENSMUST00000159879 Stra8P70278 393 aa9.77□□□□□ -0.85
Trove2-202ENSMUST00000159879 Abcc9P70170 1546 aa9.74□□□□□ -0.85
Trove2-202ENSMUST00000159879 Trim41Q5NCC3 630 aa9.68□□□□□ -0.86
Trove2-202ENSMUST00000159879 Amer1Q7TS75 1132 aa9.68□□□□□ -0.86
Trove2-202ENSMUST00000159879 Pcgf6Q99NA9 353 aa9.68□□□□□ -0.86
Trove2-202ENSMUST00000159879 Tnnt3Q9QZ47 272 aa9.59□□□□□ -0.87
Trove2-202ENSMUST00000159879 HrcG5E8J6 738 aa9.58□□□□□ -0.88
Trove2-202ENSMUST00000159879 Cdk11bP24788 784 aaKnown RBP9.58□□□□□ -0.88
Trove2-202ENSMUST00000159879 Rtl5Q5DTT4 599 aa9.55□□□□□ -0.88
Trove2-202ENSMUST00000159879 Esf1Q3V1V3 845 aaKnown RBP9.55□□□□□ -0.88
Trove2-202ENSMUST00000159879 Gab3Q8BSM5 595 aa9.52□□□□□ -0.89
Trove2-202ENSMUST00000159879 Ube2uB1AUC4 352 aa9.51□□□□□ -0.89
Trove2-202ENSMUST00000159879 Npm2Q80W85 207 aa9.46□□□□□ -0.9
Trove2-202ENSMUST00000159879 DiexfQ8BTT6 772 aaKnown RBP9.43□□□□□ -0.9
Trove2-202ENSMUST00000159879 Nop58Q6DFW4 536 aaKnown RBP9.43□□□□□ -0.9
Trove2-202ENSMUST00000159879 4930567H17RikQ3V0K5 233 aa9.4□□□□□ -0.91
Trove2-202ENSMUST00000159879 Supt5hO55201 1082 aaKnown RBP9.38□□□□□ -0.91
Trove2-202ENSMUST00000159879 UbtfP25976 765 aaKnown RBP9.38□□□□□ -0.91
Trove2-202ENSMUST00000159879 Ttbk1Q6PCN3 1308 aa9.37□□□□□ -0.91
Trove2-202ENSMUST00000159879 Myt1lP97500 1187 aa9.35□□□□□ -0.91
Trove2-202ENSMUST00000159879 4933416C03RikQ3V063 378 aa9.34□□□□□ -0.91
Trove2-202ENSMUST00000159879 Dcaf1Q80TR8 1506 aa9.31□□□□□ -0.92
Trove2-202ENSMUST00000159879 NeflP08551 543 aa9.28□□□□□ -0.92
Trove2-202ENSMUST00000159879 Slc24a1Q91WD8 1130 aa9.27□□□□□ -0.93
Trove2-202ENSMUST00000159879 TonslQ6NZL6 1363 aa9.25□□□□□ -0.93
Trove2-202ENSMUST00000159879 Anp32aO35381 247 aa9.24□□□□□ -0.93
Trove2-202ENSMUST00000159879 NrdcQ8BHG1 1161 aa9.24□□□□□ -0.93
Trove2-202ENSMUST00000159879 ClspnQ80YR7 1315 aa9.23□□□□□ -0.93
Trove2-202ENSMUST00000159879 Neurod1Q60867 357 aa9.2□□□□□ -0.94
Trove2-202ENSMUST00000159879 Anks4bQ8K3X6 423 aa9.2□□□□□ -0.94
Trove2-202ENSMUST00000159879 Il27Q8K3I6 234 aa9.2□□□□□ -0.94
Trove2-202ENSMUST00000159879 Aplp2Q06335 707 aa9.19□□□□□ -0.94
Trove2-202ENSMUST00000159879 Anp32bQ9EST5 272 aaKnown RBP9.19□□□□□ -0.94
Trove2-202ENSMUST00000159879 Abcc8B2RUS7 1588 aa9.19□□□□□ -0.94
Trove2-202ENSMUST00000159879 Zcchc6Q5BLK4 1491 aaKnown RBP9.18□□□□□ -0.94
Trove2-202ENSMUST00000159879 NclP09405 707 aaKnown RBP9.16□□□□□ -0.94
Trove2-202ENSMUST00000159879 Mier1Q5UAK0 511 aa9.13□□□□□ -0.95
Trove2-202ENSMUST00000159879 Eif5bQ05D44 1216 aaKnown RBP9.09□□□□□ -0.95
Trove2-202ENSMUST00000159879 Ccdc9Q8VC31 543 aaKnown RBP9.07□□□□□ -0.96
Trove2-202ENSMUST00000159879 Csrnp3P59055 597 aa9.07□□□□□ -0.96
Trove2-202ENSMUST00000159879 Cep164Q5DU05 1446 aa9.03□□□□□ -0.96
Trove2-202ENSMUST00000159879 Fam50aQ9WV03 339 aaKnown RBP9□□□□□ -0.97
Trove2-202ENSMUST00000159879 Ap3b1Q9Z1T1 1105 aa9□□□□□ -0.97
Trove2-202ENSMUST00000159879 DaxxO35613 739 aa8.99□□□□□ -0.97
Trove2-202ENSMUST00000159879 Ppargc1bQ8VHJ7 1014 aa8.96□□□□□ -0.98
Trove2-202ENSMUST00000159879 Sall2Q9QX96 1004 aa8.92□□□□□ -0.98
Trove2-202ENSMUST00000159879 Rb1cc1Q9ESK9 1588 aa8.92□□□□□ -0.98
Trove2-202ENSMUST00000159879 Ifnlr1Q8CGK5 535 aa8.88□□□□□ -0.99
Trove2-202ENSMUST00000159879 Hsp90aa1P07901 733 aaKnown RBP8.88□□□□□ -0.99
Trove2-202ENSMUST00000159879 Calr4Q3TQS0 420 aa8.88□□□□□ -0.99
Trove2-202ENSMUST00000159879 1700123L14RikQ3V2K7 440 aa8.87□□□□□ -0.99
Trove2-202ENSMUST00000159879 Ythdc1E9Q5K9 736 aaKnown RBP8.86□□□□□ -0.99
Trove2-202ENSMUST00000159879 Brd4Q9ESU6 1400 aaKnown RBP8.85□□□□□ -0.99
Trove2-202ENSMUST00000159879 Gm38655A0A286YDK6 273 aa8.84□□□□□ -0.99
Trove2-202ENSMUST00000159879 Upf2A2AT37 1269 aaKnown RBP8.83□□□□□ -1
Trove2-202ENSMUST00000159879 Plppr3Q7TPB0 716 aa8.82□□□□□ -1
Trove2-202ENSMUST00000159879 Wdr43Q6ZQL4 677 aaKnown RBP8.81□□□□□ -1
Trove2-202ENSMUST00000159879 Bcl11aQ9QYE3 773 aa8.81□□□□□ -1
Trove2-202ENSMUST00000159879 Ppp4r2Q0VGB7 417 aa8.8□□□□□ -1
Trove2-202ENSMUST00000159879 Ccer2J3QPU5 274 aa8.79□□□□□ -1
Trove2-202ENSMUST00000159879 Ccdc27Q3V036 639 aa8.77□□□□□ -1.01
Trove2-202ENSMUST00000159879 Fam71e1A1L3C1 212 aa8.76□□□□□ -1.01
Trove2-202ENSMUST00000159879 Os9Q8K2C7 672 aa8.76□□□□□ -1.01
Trove2-202ENSMUST00000159879 Zbtb7cQ8VCZ7 619 aa8.76□□□□□ -1.01
Trove2-202ENSMUST00000159879 Plekhg3Q4VAC9 1341 aa8.75□□□□□ -1.01
Trove2-202ENSMUST00000159879 Clip1Q922J3 1391 aa8.73□□□□□ -1.01
Trove2-202ENSMUST00000159879 Kdm5dQ62240 1548 aa8.73□□□□□ -1.01
Trove2-202ENSMUST00000159879 Hdac5Q9Z2V6 1113 aa8.71□□□□□ -1.01
Trove2-202ENSMUST00000159879 Nlrp6Q91WS2 869 aa8.68□□□□□ -1.02
Trove2-202ENSMUST00000159879 ScribQ80U72 1612 aa8.67□□□□□ -1.02
Trove2-202ENSMUST00000159879 Baz1aO88379 1555 aa8.67□□□□□ -1.02
Trove2-202ENSMUST00000159879 Fkbp15Q6P9Q6 1216 aaKnown RBP8.67□□□□□ -1.02
Trove2-202ENSMUST00000159879 Mapk8ip2Q9ERE9 830 aa8.67□□□□□ -1.02
Trove2-202ENSMUST00000159879 Irx3P81067 507 aa8.66□□□□□ -1.02
Trove2-202ENSMUST00000159879 Trim44Q9QXA7 346 aa8.65□□□□□ -1.02
Trove2-202ENSMUST00000159879 Ubl4bQ9CQ84 188 aa8.63□□□□□ -1.03
Trove2-202ENSMUST00000159879 Htatsf1Q8BGC0 757 aa8.63□□□□□ -1.03
Trove2-202ENSMUST00000159879 NacadQ5SWP3 1504 aa8.63□□□□□ -1.03
Trove2-202ENSMUST00000159879 Lmod2Q3UHZ5 550 aa8.63□□□□□ -1.03
Trove2-202ENSMUST00000159879 Npm1Q61937 292 aaKnown RBP8.62□□□□□ -1.03
Trove2-202ENSMUST00000159879 Eid3Q3V124 375 aa8.62□□□□□ -1.03
Trove2-202ENSMUST00000159879 CatipB9EKE5 520 aa8.62□□□□□ -1.03
Trove2-202ENSMUST00000159879 CanxP35564 591 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms