RNA–Protein interactions for RNA: ENSMUST00000156290.8

Ttc28-206, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ttc28, Length 10,688 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-206ENSMUST00000156290 Rhox8Q6VSS7 320 aa16.37■□□□□ 0.21
Ttc28-206ENSMUST00000156290 Rpgrip1Q9EPQ2 1331 aa15.99■□□□□ 0.15
Ttc28-206ENSMUST00000156290 Las1lA2BE28 776 aaKnown RBP15.32■□□□□ 0.04
Ttc28-206ENSMUST00000156290 Cngb1E1AZ71 1325 aa15.17■□□□□ 0.02
Ttc28-206ENSMUST00000156290 Rtl1Q7M732 1744 aa14.98□□□□□ -0.01
Ttc28-206ENSMUST00000156290 Ehmt2Q9Z148 1263 aaKnown RBP14.86□□□□□ -0.03
Ttc28-206ENSMUST00000156290 Pelp1Q9DBD5 1123 aaKnown RBP14.78□□□□□ -0.04
Ttc28-206ENSMUST00000156290 Myt1Q8CFC2 1127 aa14.71□□□□□ -0.05
Ttc28-206ENSMUST00000156290 Ccdc136Q3TVA9 1136 aa14.66□□□□□ -0.06
Ttc28-206ENSMUST00000156290 Ccdc180J3QNE4 1664 aa14.53□□□□□ -0.08
Ttc28-206ENSMUST00000156290 Esf1Q3V1V3 845 aaKnown RBP14.45□□□□□ -0.1
Ttc28-206ENSMUST00000156290 Gab3Q8BSM5 595 aa14.36□□□□□ -0.11
Ttc28-206ENSMUST00000156290 CenpbP27790 599 aa14.33□□□□□ -0.12
Ttc28-206ENSMUST00000156290 Acin1Q9JIX8 1338 aaKnown RBP14.23□□□□□ -0.13
Ttc28-206ENSMUST00000156290 Zeb1Q64318 1117 aa14.2□□□□□ -0.14
Ttc28-206ENSMUST00000156290 Ube2uB1AUC4 352 aa14.13□□□□□ -0.15
Ttc28-206ENSMUST00000156290 NischQ80TM9 1593 aa14.12□□□□□ -0.15
Ttc28-206ENSMUST00000156290 Myt1lP97500 1187 aa14.09□□□□□ -0.15
Ttc28-206ENSMUST00000156290 Npm2Q80W85 207 aa14.07□□□□□ -0.16
Ttc28-206ENSMUST00000156290 Amer1Q7TS75 1132 aa14.06□□□□□ -0.16
Ttc28-206ENSMUST00000156290 Wdr66E9Q743 1299 aa14.03□□□□□ -0.16
Ttc28-206ENSMUST00000156290 Stra8P70278 393 aa13.96□□□□□ -0.18
Ttc28-206ENSMUST00000156290 NefmP08553 848 aa13.94□□□□□ -0.18
Ttc28-206ENSMUST00000156290 Trim41Q5NCC3 630 aa13.94□□□□□ -0.18
Ttc28-206ENSMUST00000156290 Rtl5Q5DTT4 599 aa13.81□□□□□ -0.2
Ttc28-206ENSMUST00000156290 Il27Q8K3I6 234 aa13.79□□□□□ -0.2
Ttc28-206ENSMUST00000156290 Tnnt3Q9QZ47 272 aa13.71□□□□□ -0.21
Ttc28-206ENSMUST00000156290 Abcc9P70170 1546 aa13.67□□□□□ -0.22
Ttc28-206ENSMUST00000156290 UbtfP25976 765 aaKnown RBP13.67□□□□□ -0.22
Ttc28-206ENSMUST00000156290 Gm35339A0A140LHH9 1649 aa13.65□□□□□ -0.22
Ttc28-206ENSMUST00000156290 DiexfQ8BTT6 772 aaKnown RBP13.65□□□□□ -0.22
Ttc28-206ENSMUST00000156290 Pcgf6Q99NA9 353 aa13.65□□□□□ -0.22
Ttc28-206ENSMUST00000156290 4930567H17RikQ3V0K5 233 aa13.58□□□□□ -0.23
Ttc28-206ENSMUST00000156290 Ap3b1Q9Z1T1 1105 aa13.55□□□□□ -0.24
Ttc28-206ENSMUST00000156290 Cdk11bP24788 784 aaKnown RBP13.54□□□□□ -0.24
Ttc28-206ENSMUST00000156290 HrcG5E8J6 738 aa13.49□□□□□ -0.25
Ttc28-206ENSMUST00000156290 Slc24a1Q91WD8 1130 aa13.46□□□□□ -0.25
Ttc28-206ENSMUST00000156290 Zcchc6Q5BLK4 1491 aaKnown RBP13.43□□□□□ -0.26
Ttc28-206ENSMUST00000156290 Ppargc1bQ8VHJ7 1014 aa13.34□□□□□ -0.27
Ttc28-206ENSMUST00000156290 Neurod1Q60867 357 aa13.3□□□□□ -0.28
Ttc28-206ENSMUST00000156290 Nop58Q6DFW4 536 aaKnown RBP13.29□□□□□ -0.28
Ttc28-206ENSMUST00000156290 Fam50aQ9WV03 339 aaKnown RBP13.27□□□□□ -0.28
Ttc28-206ENSMUST00000156290 Ccdc9Q8VC31 543 aaKnown RBP13.25□□□□□ -0.29
Ttc28-206ENSMUST00000156290 4933416C03RikQ3V063 378 aa13.22□□□□□ -0.29
Ttc28-206ENSMUST00000156290 Dcaf1Q80TR8 1506 aa13.21□□□□□ -0.29
Ttc28-206ENSMUST00000156290 Zbtb7cQ8VCZ7 619 aa13.19□□□□□ -0.3
Ttc28-206ENSMUST00000156290 Ifnlr1Q8CGK5 535 aa13.18□□□□□ -0.3
Ttc28-206ENSMUST00000156290 Aplp2Q06335 707 aa13.18□□□□□ -0.3
Ttc28-206ENSMUST00000156290 Ttbk1Q6PCN3 1308 aa13.17□□□□□ -0.3
Ttc28-206ENSMUST00000156290 Anp32aO35381 247 aa13.16□□□□□ -0.3
Ttc28-206ENSMUST00000156290 NeflP08551 543 aa13.13□□□□□ -0.31
Ttc28-206ENSMUST00000156290 Supt5hO55201 1082 aaKnown RBP13.11□□□□□ -0.31
Ttc28-206ENSMUST00000156290 Anks4bQ8K3X6 423 aa13.11□□□□□ -0.31
Ttc28-206ENSMUST00000156290 Lmod2Q3UHZ5 550 aa13.08□□□□□ -0.32
Ttc28-206ENSMUST00000156290 Os9Q8K2C7 672 aa13.08□□□□□ -0.32
Ttc28-206ENSMUST00000156290 ClspnQ80YR7 1315 aa13.06□□□□□ -0.32
Ttc28-206ENSMUST00000156290 Anp32bQ9EST5 272 aaKnown RBP13□□□□□ -0.33
Ttc28-206ENSMUST00000156290 NrdcQ8BHG1 1161 aa13□□□□□ -0.33
Ttc28-206ENSMUST00000156290 Plppr3Q7TPB0 716 aa12.99□□□□□ -0.33
Ttc28-206ENSMUST00000156290 NclP09405 707 aaKnown RBP12.99□□□□□ -0.33
Ttc28-206ENSMUST00000156290 Zbtb4Q5F293 982 aa12.97□□□□□ -0.33
Ttc28-206ENSMUST00000156290 Ythdc1E9Q5K9 736 aaKnown RBP12.97□□□□□ -0.33
Ttc28-206ENSMUST00000156290 Npm1Q61937 292 aaKnown RBP12.97□□□□□ -0.33
Ttc28-206ENSMUST00000156290 Plekhg3Q4VAC9 1341 aa12.96□□□□□ -0.33
Ttc28-206ENSMUST00000156290 Eif5bQ05D44 1216 aaKnown RBP12.95□□□□□ -0.34
Ttc28-206ENSMUST00000156290 Fkbp15Q6P9Q6 1216 aaKnown RBP12.94□□□□□ -0.34
Ttc28-206ENSMUST00000156290 TonslQ6NZL6 1363 aa12.93□□□□□ -0.34
Ttc28-206ENSMUST00000156290 Chic1Q8CBW7 227 aa12.92□□□□□ -0.34
Ttc28-206ENSMUST00000156290 Hnrnpul2Q00PI9 745 aaKnown RBP12.91□□□□□ -0.34
Ttc28-206ENSMUST00000156290 Prdm10Q3UTQ7 1184 aa12.85□□□□□ -0.35
Ttc28-206ENSMUST00000156290 Mier1Q5UAK0 511 aa12.84□□□□□ -0.35
Ttc28-206ENSMUST00000156290 Abcc8B2RUS7 1588 aa12.83□□□□□ -0.36
Ttc28-206ENSMUST00000156290 Mapk8ip2Q9ERE9 830 aa12.82□□□□□ -0.36
Ttc28-206ENSMUST00000156290 Erich6D3Z6S9 713 aa12.81□□□□□ -0.36
Ttc28-206ENSMUST00000156290 Gm13697A2AK42 830 aa12.81□□□□□ -0.36
Ttc28-206ENSMUST00000156290 DaxxO35613 739 aa12.73□□□□□ -0.37
Ttc28-206ENSMUST00000156290 Csrnp3P59055 597 aa12.72□□□□□ -0.37
Ttc28-206ENSMUST00000156290 Atp1b4Q99ME6 356 aa12.72□□□□□ -0.37
Ttc28-206ENSMUST00000156290 Eid3Q3V124 375 aa12.71□□□□□ -0.37
Ttc28-206ENSMUST00000156290 Cep164Q5DU05 1446 aa12.68□□□□□ -0.38
Ttc28-206ENSMUST00000156290 Ubl4bQ9CQ84 188 aa12.67□□□□□ -0.38
Ttc28-206ENSMUST00000156290 Bcl11aQ9QYE3 773 aa12.65□□□□□ -0.38
Ttc28-206ENSMUST00000156290 Hsp90aa1P07901 733 aaKnown RBP12.62□□□□□ -0.39
Ttc28-206ENSMUST00000156290 1700123L14RikQ3V2K7 440 aa12.58□□□□□ -0.4
Ttc28-206ENSMUST00000156290 Gm13695A2AK44 830 aa12.56□□□□□ -0.4
Ttc28-206ENSMUST00000156290 Upf2A2AT37 1269 aaKnown RBP12.56□□□□□ -0.4
Ttc28-206ENSMUST00000156290 Ccdc27Q3V036 639 aa12.55□□□□□ -0.4
Ttc28-206ENSMUST00000156290 Chic2Q9D9G3 165 aa12.54□□□□□ -0.4
Ttc28-206ENSMUST00000156290 Calr4Q3TQS0 420 aa12.52□□□□□ -0.4
Ttc28-206ENSMUST00000156290 Clip1Q922J3 1391 aa12.52□□□□□ -0.41
Ttc28-206ENSMUST00000156290 Polr3glQ8R0C0 218 aa12.5□□□□□ -0.41
Ttc28-206ENSMUST00000156290 Rangap1P46061 589 aaKnown RBP12.5□□□□□ -0.41
Ttc28-206ENSMUST00000156290 Wdr43Q6ZQL4 677 aaKnown RBP12.48□□□□□ -0.41
Ttc28-206ENSMUST00000156290 Gm38655A0A286YDK6 273 aa12.48□□□□□ -0.41
Ttc28-206ENSMUST00000156290 Rb1cc1Q9ESK9 1588 aa12.47□□□□□ -0.41
Ttc28-206ENSMUST00000156290 Brd4Q9ESU6 1400 aaKnown RBP12.47□□□□□ -0.41
Ttc28-206ENSMUST00000156290 Irx3P81067 507 aa12.46□□□□□ -0.41
Ttc28-206ENSMUST00000156290 Nlrp6Q91WS2 869 aa12.46□□□□□ -0.41
Ttc28-206ENSMUST00000156290 Sall2Q9QX96 1004 aa12.46□□□□□ -0.42
Ttc28-206ENSMUST00000156290 Ccer2J3QPU5 274 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms