RNA–Protein interactions for RNA: ENSMUST00000142613.1

Vamp8-202, Transcript of Vesicle-associated membrane protein 8, mousemouse

TSL 1 (best) BASIC

Gene Vamp8, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8-202ENSMUST00000142613 NischQ80TM9 1593 aa25.04■■□□□ 1.6
Vamp8-202ENSMUST00000142613 Gm35339A0A140LHH9 1649 aa24.61■■□□□ 1.53
Vamp8-202ENSMUST00000142613 Abcc9P70170 1546 aa24.3■■□□□ 1.48
Vamp8-202ENSMUST00000142613 Rtl1Q7M732 1744 aa23.93■■□□□ 1.42
Vamp8-202ENSMUST00000142613 Rpgrip1Q9EPQ2 1331 aa23.9■■□□□ 1.42
Vamp8-202ENSMUST00000142613 Abcc8B2RUS7 1588 aa23.81■■□□□ 1.4
Vamp8-202ENSMUST00000142613 Ccdc180J3QNE4 1664 aa23.58■■□□□ 1.37
Vamp8-202ENSMUST00000142613 Rhox8Q6VSS7 320 aa23.2■■□□□ 1.3
Vamp8-202ENSMUST00000142613 Acin1Q9JIX8 1338 aaKnown RBP22.94■■□□□ 1.26
Vamp8-202ENSMUST00000142613 Zcchc6Q5BLK4 1491 aaKnown RBP22.62■■□□□ 1.21
Vamp8-202ENSMUST00000142613 Dcaf1Q80TR8 1506 aa22.44■■□□□ 1.18
Vamp8-202ENSMUST00000142613 HrcG5E8J6 738 aa22.35■■□□□ 1.17
Vamp8-202ENSMUST00000142613 Pcgf6Q99NA9 353 aa22.35■■□□□ 1.17
Vamp8-202ENSMUST00000142613 ScribQ80U72 1612 aa22.19■■□□□ 1.14
Vamp8-202ENSMUST00000142613 Ehmt2Q9Z148 1263 aaKnown RBP21.95■■□□□ 1.1
Vamp8-202ENSMUST00000142613 Rb1cc1Q9ESK9 1588 aa21.91■■□□□ 1.1
Vamp8-202ENSMUST00000142613 Trim41Q5NCC3 630 aa21.89■■□□□ 1.09
Vamp8-202ENSMUST00000142613 Kdm5dQ62240 1548 aa21.81■■□□□ 1.08
Vamp8-202ENSMUST00000142613 NacadQ5SWP3 1504 aa21.71■■□□□ 1.07
Vamp8-202ENSMUST00000142613 Baz1aO88379 1555 aa21.68■■□□□ 1.06
Vamp8-202ENSMUST00000142613 Supt5hO55201 1082 aaKnown RBP21.65■■□□□ 1.06
Vamp8-202ENSMUST00000142613 Las1lA2BE28 776 aaKnown RBP21.59■■□□□ 1.05
Vamp8-202ENSMUST00000142613 Neurod1Q60867 357 aa21.48■■□□□ 1.03
Vamp8-202ENSMUST00000142613 Ccdc136Q3TVA9 1136 aa21.44■■□□□ 1.02
Vamp8-202ENSMUST00000142613 Cep164Q5DU05 1446 aa21.38■■□□□ 1.01
Vamp8-202ENSMUST00000142613 Crybg2B7ZCC2 1516 aa21.34■■□□□ 1.01
Vamp8-202ENSMUST00000142613 NefmP08553 848 aa21.27■□□□□ 0.99
Vamp8-202ENSMUST00000142613 Sycp2Q9CUU3 1500 aa21.22■□□□□ 0.99
Vamp8-202ENSMUST00000142613 Smarca2Q6DIC0 1577 aa21.16■□□□□ 0.98
Vamp8-202ENSMUST00000142613 Myt1Q8CFC2 1127 aa21.15■□□□□ 0.98
Vamp8-202ENSMUST00000142613 Cngb1E1AZ71 1325 aa21.14■□□□□ 0.97
Vamp8-202ENSMUST00000142613 Anks4bQ8K3X6 423 aa21.09■□□□□ 0.97
Vamp8-202ENSMUST00000142613 Zeb1Q64318 1117 aa21■□□□□ 0.95
Vamp8-202ENSMUST00000142613 1700123L14RikQ3V2K7 440 aa20.95■□□□□ 0.94
Vamp8-202ENSMUST00000142613 Sall2Q9QX96 1004 aa20.91■□□□□ 0.94
Vamp8-202ENSMUST00000142613 CenpbP27790 599 aa20.85■□□□□ 0.93
Vamp8-202ENSMUST00000142613 Mier1Q5UAK0 511 aa20.84■□□□□ 0.93
Vamp8-202ENSMUST00000142613 Aplp2Q06335 707 aa20.79■□□□□ 0.92
Vamp8-202ENSMUST00000142613 Csrnp3P59055 597 aa20.75■□□□□ 0.91
Vamp8-202ENSMUST00000142613 Brd4Q9ESU6 1400 aaKnown RBP20.73■□□□□ 0.91
Vamp8-202ENSMUST00000142613 BicraF8VPZ9 1578 aa20.7■□□□□ 0.9
Vamp8-202ENSMUST00000142613 Cecr2E9Q2Z1 1453 aa20.68■□□□□ 0.9
Vamp8-202ENSMUST00000142613 Rsf1E9PWW9 1441 aaKnown RBP20.66■□□□□ 0.9
Vamp8-202ENSMUST00000142613 Cdk11bP24788 784 aaKnown RBP20.62■□□□□ 0.89
Vamp8-202ENSMUST00000142613 Chic1Q8CBW7 227 aa20.56■□□□□ 0.88
Vamp8-202ENSMUST00000142613 ClspnQ80YR7 1315 aa20.53■□□□□ 0.88
Vamp8-202ENSMUST00000142613 Nop58Q6DFW4 536 aaKnown RBP20.52■□□□□ 0.87
Vamp8-202ENSMUST00000142613 Gab3Q8BSM5 595 aa20.5■□□□□ 0.87
Vamp8-202ENSMUST00000142613 Synj1Q8CHC4 1574 aa20.49■□□□□ 0.87
Vamp8-202ENSMUST00000142613 Golga3P55937 1487 aa20.44■□□□□ 0.86
Vamp8-202ENSMUST00000142613 Wdr66E9Q743 1299 aa20.43■□□□□ 0.86
Vamp8-202ENSMUST00000142613 CftrP26361 1476 aa20.41■□□□□ 0.86
Vamp8-202ENSMUST00000142613 Ccdc88bQ4QRL3 1481 aa20.38■□□□□ 0.85
Vamp8-202ENSMUST00000142613 Aebp2Q9Z248 504 aaKnown RBP20.36■□□□□ 0.85
Vamp8-202ENSMUST00000142613 Esf1Q3V1V3 845 aaKnown RBP20.34■□□□□ 0.85
Vamp8-202ENSMUST00000142613 Cttnbp2B9EJA2 1648 aa20.27■□□□□ 0.84
Vamp8-202ENSMUST00000142613 Smarca4Q3TKT4 1613 aaKnown RBP20.27■□□□□ 0.84
Vamp8-202ENSMUST00000142613 TonslQ6NZL6 1363 aa20.15■□□□□ 0.82
Vamp8-202ENSMUST00000142613 Top2bQ64511 1612 aa20.14■□□□□ 0.82
Vamp8-202ENSMUST00000142613 UbtfP25976 765 aaKnown RBP20.14■□□□□ 0.81
Vamp8-202ENSMUST00000142613 DiexfQ8BTT6 772 aaKnown RBP20.12■□□□□ 0.81
Vamp8-202ENSMUST00000142613 Tnnt3Q9QZ47 272 aa20.12■□□□□ 0.81
Vamp8-202ENSMUST00000142613 Rapgef2Q8CHG7 1496 aa20.05■□□□□ 0.8
Vamp8-202ENSMUST00000142613 Iqgap2Q3UQ44 1575 aa20■□□□□ 0.79
Vamp8-202ENSMUST00000142613 Atad2bE9Q166 1460 aaKnown RBP19.98■□□□□ 0.79
Vamp8-202ENSMUST00000142613 Fmn1Q05860 1466 aa19.93■□□□□ 0.78
Vamp8-202ENSMUST00000142613 Cc2d2aQ8CFW7 1633 aa19.93■□□□□ 0.78
Vamp8-202ENSMUST00000142613 Pds5bQ4VA53 1446 aaKnown RBP19.92■□□□□ 0.78
Vamp8-202ENSMUST00000142613 Gm38655A0A286YDK6 273 aa19.91■□□□□ 0.78
Vamp8-202ENSMUST00000142613 Bcl11aQ9QYE3 773 aa19.91■□□□□ 0.78
Vamp8-202ENSMUST00000142613 Fam71e1A1L3C1 212 aa19.88■□□□□ 0.77
Vamp8-202ENSMUST00000142613 Ppargc1bQ8VHJ7 1014 aa19.85■□□□□ 0.77
Vamp8-202ENSMUST00000142613 Cep162Q6ZQ06 1403 aa19.83■□□□□ 0.77
Vamp8-202ENSMUST00000142613 Ncapd3Q6ZQK0 1506 aa19.82■□□□□ 0.76
Vamp8-202ENSMUST00000142613 Rtl5Q5DTT4 599 aa19.79■□□□□ 0.76
Vamp8-202ENSMUST00000142613 Top2aQ01320 1528 aaKnown RBP19.78■□□□□ 0.76
Vamp8-202ENSMUST00000142613 Hnrnpul2Q00PI9 745 aaKnown RBP19.77■□□□□ 0.76
Vamp8-202ENSMUST00000142613 Anp32aO35381 247 aa19.72■□□□□ 0.75
Vamp8-202ENSMUST00000142613 Stra8P70278 393 aa19.72■□□□□ 0.75
Vamp8-202ENSMUST00000142613 Clip1Q922J3 1391 aa19.66■□□□□ 0.74
Vamp8-202ENSMUST00000142613 SafbD3YXK2 937 aaKnown RBP19.66■□□□□ 0.74
Vamp8-202ENSMUST00000142613 Frmpd1A2AKB4 1549 aa19.63■□□□□ 0.73
Vamp8-202ENSMUST00000142613 Wdr62Q3U3T8 1523 aa19.61■□□□□ 0.73
Vamp8-202ENSMUST00000142613 Eif4g1Q6NZJ6 1600 aaKnown RBP19.6■□□□□ 0.73
Vamp8-202ENSMUST00000142613 Myt1lP97500 1187 aa19.6■□□□□ 0.73
Vamp8-202ENSMUST00000142613 Mapk8ip2Q9ERE9 830 aa19.59■□□□□ 0.73
Vamp8-202ENSMUST00000142613 TnnQ80Z71 1560 aa19.58■□□□□ 0.72
Vamp8-202ENSMUST00000142613 Npm2Q80W85 207 aa19.58■□□□□ 0.72
Vamp8-202ENSMUST00000142613 Pelp1Q9DBD5 1123 aaKnown RBP19.57■□□□□ 0.72
Vamp8-202ENSMUST00000142613 Ercc6F8VPZ5 1481 aa19.56■□□□□ 0.72
Vamp8-202ENSMUST00000142613 Kdm5bQ80Y84 1544 aa19.55■□□□□ 0.72
Vamp8-202ENSMUST00000142613 Znf710Q3U288 666 aa19.54■□□□□ 0.72
Vamp8-202ENSMUST00000142613 Plekhg3Q4VAC9 1341 aa19.51■□□□□ 0.71
Vamp8-202ENSMUST00000142613 Lamc3Q9R0B6 1581 aa19.46■□□□□ 0.71
Vamp8-202ENSMUST00000142613 Kif15Q6P9L6 1387 aa19.45■□□□□ 0.7
Vamp8-202ENSMUST00000142613 Rpap1Q80TE0 1409 aa19.43■□□□□ 0.7
Vamp8-202ENSMUST00000142613 TchhA0A0B4J1F9 1599 aa19.43■□□□□ 0.7
Vamp8-202ENSMUST00000142613 Ap3b1Q9Z1T1 1105 aa19.43■□□□□ 0.7
Vamp8-202ENSMUST00000142613 Ccdc18Q640L5 1455 aa19.42■□□□□ 0.7
Vamp8-202ENSMUST00000142613 Calr4Q3TQS0 420 aa19.37■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms