RNA–Protein interactions for RNA: ENSMUST00000122044.7

Csnk1e-203, Transcript of Casein kinase I isoform epsilon, mousemouse

TSL 1 (best) BASIC

Gene Csnk1e, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1e-203ENSMUST00000122044 Rhox8Q6VSS7 320 aa32.05■■■□□ 2.72
Csnk1e-203ENSMUST00000122044 NischQ80TM9 1593 aa31.78■■■□□ 2.68
Csnk1e-203ENSMUST00000122044 Ehmt2Q9Z148 1263 aaKnown RBP31.06■■■□□ 2.56
Csnk1e-203ENSMUST00000122044 Abcc9P70170 1546 aa30.52■■■□□ 2.48
Csnk1e-203ENSMUST00000122044 Gm35339A0A140LHH9 1649 aa30.43■■■□□ 2.46
Csnk1e-203ENSMUST00000122044 Rpgrip1Q9EPQ2 1331 aa30.38■■■□□ 2.45
Csnk1e-203ENSMUST00000122044 Abcc8B2RUS7 1588 aa30.1■■■□□ 2.41
Csnk1e-203ENSMUST00000122044 Acin1Q9JIX8 1338 aaKnown RBP30.04■■■□□ 2.4
Csnk1e-203ENSMUST00000122044 Ccdc180J3QNE4 1664 aa29.94■■■□□ 2.38
Csnk1e-203ENSMUST00000122044 Rtl1Q7M732 1744 aa29.81■■■□□ 2.36
Csnk1e-203ENSMUST00000122044 Pcgf6Q99NA9 353 aa29.72■■■□□ 2.35
Csnk1e-203ENSMUST00000122044 Ccdc136Q3TVA9 1136 aa29.66■■■□□ 2.34
Csnk1e-203ENSMUST00000122044 Supt5hO55201 1082 aaKnown RBP29.21■■■□□ 2.27
Csnk1e-203ENSMUST00000122044 Zcchc6Q5BLK4 1491 aaKnown RBP29.09■■■□□ 2.25
Csnk1e-203ENSMUST00000122044 Trim41Q5NCC3 630 aa28.96■■■□□ 2.23
Csnk1e-203ENSMUST00000122044 Zeb1Q64318 1117 aa28.95■■■□□ 2.22
Csnk1e-203ENSMUST00000122044 HrcG5E8J6 738 aa28.86■■■□□ 2.21
Csnk1e-203ENSMUST00000122044 Neurod1Q60867 357 aa28.73■■■□□ 2.19
Csnk1e-203ENSMUST00000122044 Dcaf1Q80TR8 1506 aa28.67■■■□□ 2.18
Csnk1e-203ENSMUST00000122044 Gab3Q8BSM5 595 aa28.62■■■□□ 2.17
Csnk1e-203ENSMUST00000122044 Cngb1E1AZ71 1325 aa28.37■■■□□ 2.13
Csnk1e-203ENSMUST00000122044 ScribQ80U72 1612 aa28.27■■■□□ 2.12
Csnk1e-203ENSMUST00000122044 Ppargc1bQ8VHJ7 1014 aa28.24■■■□□ 2.11
Csnk1e-203ENSMUST00000122044 Sall2Q9QX96 1004 aa28.12■■■□□ 2.09
Csnk1e-203ENSMUST00000122044 Wdr66E9Q743 1299 aa28.03■■■□□ 2.08
Csnk1e-203ENSMUST00000122044 Mier1Q5UAK0 511 aa28.02■■■□□ 2.08
Csnk1e-203ENSMUST00000122044 Csrnp3P59055 597 aa27.96■■■□□ 2.07
Csnk1e-203ENSMUST00000122044 Rb1cc1Q9ESK9 1588 aa27.94■■■□□ 2.06
Csnk1e-203ENSMUST00000122044 Chic1Q8CBW7 227 aa27.93■■■□□ 2.06
Csnk1e-203ENSMUST00000122044 Las1lA2BE28 776 aaKnown RBP27.88■■■□□ 2.05
Csnk1e-203ENSMUST00000122044 Gm38655A0A286YDK6 273 aa27.85■■■□□ 2.05
Csnk1e-203ENSMUST00000122044 Kdm5dQ62240 1548 aa27.83■■■□□ 2.05
Csnk1e-203ENSMUST00000122044 1700123L14RikQ3V2K7 440 aa27.83■■■□□ 2.04
Csnk1e-203ENSMUST00000122044 UbtfP25976 765 aaKnown RBP27.74■■■□□ 2.03
Csnk1e-203ENSMUST00000122044 Cep164Q5DU05 1446 aa27.71■■■□□ 2.03
Csnk1e-203ENSMUST00000122044 NefmP08553 848 aa27.71■■■□□ 2.03
Csnk1e-203ENSMUST00000122044 Aebp2Q9Z248 504 aaKnown RBP27.6■■■□□ 2.01
Csnk1e-203ENSMUST00000122044 NacadQ5SWP3 1504 aa27.51■■□□□ 1.99
Csnk1e-203ENSMUST00000122044 Rsf1E9PWW9 1441 aaKnown RBP27.44■■□□□ 1.98
Csnk1e-203ENSMUST00000122044 Anks4bQ8K3X6 423 aa27.44■■□□□ 1.98
Csnk1e-203ENSMUST00000122044 Baz1aO88379 1555 aa27.38■■□□□ 1.97
Csnk1e-203ENSMUST00000122044 Nop58Q6DFW4 536 aaKnown RBP27.37■■□□□ 1.97
Csnk1e-203ENSMUST00000122044 Cdk11bP24788 784 aaKnown RBP27.36■■□□□ 1.97
Csnk1e-203ENSMUST00000122044 Myt1lP97500 1187 aa27.33■■□□□ 1.97
Csnk1e-203ENSMUST00000122044 Esf1Q3V1V3 845 aaKnown RBP27.33■■□□□ 1.97
Csnk1e-203ENSMUST00000122044 Ccdc88bQ4QRL3 1481 aa27.17■■□□□ 1.94
Csnk1e-203ENSMUST00000122044 CenpbP27790 599 aa27.06■■□□□ 1.92
Csnk1e-203ENSMUST00000122044 ClspnQ80YR7 1315 aa26.98■■□□□ 1.91
Csnk1e-203ENSMUST00000122044 Mapk8ip2Q9ERE9 830 aa26.95■■□□□ 1.9
Csnk1e-203ENSMUST00000122044 Sycp2Q9CUU3 1500 aa26.93■■□□□ 1.9
Csnk1e-203ENSMUST00000122044 Plekhg3Q4VAC9 1341 aa26.86■■□□□ 1.89
Csnk1e-203ENSMUST00000122044 Aplp2Q06335 707 aa26.86■■□□□ 1.89
Csnk1e-203ENSMUST00000122044 TonslQ6NZL6 1363 aa26.84■■□□□ 1.89
Csnk1e-203ENSMUST00000122044 Ap3b1Q9Z1T1 1105 aa26.84■■□□□ 1.89
Csnk1e-203ENSMUST00000122044 SafbD3YXK2 937 aaKnown RBP26.82■■□□□ 1.88
Csnk1e-203ENSMUST00000122044 Eid3Q3V124 375 aa26.81■■□□□ 1.88
Csnk1e-203ENSMUST00000122044 Npm2Q80W85 207 aa26.76■■□□□ 1.87
Csnk1e-203ENSMUST00000122044 Smarca2Q6DIC0 1577 aa26.75■■□□□ 1.87
Csnk1e-203ENSMUST00000122044 Cecr2E9Q2Z1 1453 aa26.67■■□□□ 1.86
Csnk1e-203ENSMUST00000122044 Hnrnpul2Q00PI9 745 aaKnown RBP26.63■■□□□ 1.85
Csnk1e-203ENSMUST00000122044 Golga3P55937 1487 aa26.6■■□□□ 1.85
Csnk1e-203ENSMUST00000122044 Fam71e1A1L3C1 212 aa26.6■■□□□ 1.85
Csnk1e-203ENSMUST00000122044 Brd4Q9ESU6 1400 aaKnown RBP26.56■■□□□ 1.84
Csnk1e-203ENSMUST00000122044 BicraF8VPZ9 1578 aa26.42■■□□□ 1.82
Csnk1e-203ENSMUST00000122044 Slc24a1Q91WD8 1130 aa26.39■■□□□ 1.82
Csnk1e-203ENSMUST00000122044 Crybg2B7ZCC2 1516 aa26.37■■□□□ 1.81
Csnk1e-203ENSMUST00000122044 DiexfQ8BTT6 772 aaKnown RBP26.32■■□□□ 1.8
Csnk1e-203ENSMUST00000122044 Synj1Q8CHC4 1574 aa26.3■■□□□ 1.8
Csnk1e-203ENSMUST00000122044 Myt1Q8CFC2 1127 aa26.3■■□□□ 1.8
Csnk1e-203ENSMUST00000122044 Clip1Q922J3 1391 aa26.24■■□□□ 1.79
Csnk1e-203ENSMUST00000122044 Il27Q8K3I6 234 aa26.14■■□□□ 1.78
Csnk1e-203ENSMUST00000122044 Bcl11aQ9QYE3 773 aa26.14■■□□□ 1.78
Csnk1e-203ENSMUST00000122044 NclP09405 707 aaKnown RBP26.1■■□□□ 1.77
Csnk1e-203ENSMUST00000122044 Ifnlr1Q8CGK5 535 aa26.1■■□□□ 1.77
Csnk1e-203ENSMUST00000122044 Fam50aQ9WV03 339 aaKnown RBP26.1■■□□□ 1.77
Csnk1e-203ENSMUST00000122044 Rapgef2Q8CHG7 1496 aa26.07■■□□□ 1.76
Csnk1e-203ENSMUST00000122044 Cep162Q6ZQ06 1403 aa26.05■■□□□ 1.76
Csnk1e-203ENSMUST00000122044 Tnnt3Q9QZ47 272 aa26■■□□□ 1.75
Csnk1e-203ENSMUST00000122044 CftrP26361 1476 aa25.98■■□□□ 1.75
Csnk1e-203ENSMUST00000122044 Cc2d2aQ8CFW7 1633 aa25.96■■□□□ 1.75
Csnk1e-203ENSMUST00000122044 Ttbk1Q6PCN3 1308 aa25.96■■□□□ 1.75
Csnk1e-203ENSMUST00000122044 Eif5bQ05D44 1216 aaKnown RBP25.95■■□□□ 1.74
Csnk1e-203ENSMUST00000122044 Lmod2Q3UHZ5 550 aa25.91■■□□□ 1.74
Csnk1e-203ENSMUST00000122044 Ube2uB1AUC4 352 aa25.87■■□□□ 1.73
Csnk1e-203ENSMUST00000122044 Nolc1E9Q5C9 702 aaKnown RBP25.83■■□□□ 1.72
Csnk1e-203ENSMUST00000122044 Anp32aO35381 247 aa25.81■■□□□ 1.72
Csnk1e-203ENSMUST00000122044 PrkcshO08795 521 aa25.75■■□□□ 1.71
Csnk1e-203ENSMUST00000122044 Calr4Q3TQS0 420 aa25.75■■□□□ 1.71
Csnk1e-203ENSMUST00000122044 Ncapd3Q6ZQK0 1506 aa25.72■■□□□ 1.71
Csnk1e-203ENSMUST00000122044 Znf710Q3U288 666 aa25.7■■□□□ 1.71
Csnk1e-203ENSMUST00000122044 Smarca4Q3TKT4 1613 aaKnown RBP25.68■■□□□ 1.7
Csnk1e-203ENSMUST00000122044 Top2bQ64511 1612 aa25.68■■□□□ 1.7
Csnk1e-203ENSMUST00000122044 P3h3Q8CG70 732 aa25.67■■□□□ 1.7
Csnk1e-203ENSMUST00000122044 Sin3aQ60520 1274 aaKnown RBP25.66■■□□□ 1.7
Csnk1e-203ENSMUST00000122044 Hspa5P20029 655 aaKnown RBP25.65■■□□□ 1.7
Csnk1e-203ENSMUST00000122044 Ppp4r2Q0VGB7 417 aa25.63■■□□□ 1.69
Csnk1e-203ENSMUST00000122044 Stra8P70278 393 aa25.59■■□□□ 1.69
Csnk1e-203ENSMUST00000122044 Fmn1Q05860 1466 aa25.56■■□□□ 1.68
Csnk1e-203ENSMUST00000122044 Setd5Q5XJV7 1441 aa25.56■■□□□ 1.68
Csnk1e-203ENSMUST00000122044 Rpap1Q80TE0 1409 aa25.56■■□□□ 1.68
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms