RNA–Protein interactions for RNA: ENSMUST00000115351.9

Rab3d-201, Transcript of Ras-related protein Rab-3D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rab3d, Length 3,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3d-201ENSMUST00000115351 Rhox8Q6VSS7 320 aa24.26■■□□□ 1.47
Rab3d-201ENSMUST00000115351 NischQ80TM9 1593 aa24.07■■□□□ 1.44
Rab3d-201ENSMUST00000115351 Abcc9P70170 1546 aa23.01■■□□□ 1.27
Rab3d-201ENSMUST00000115351 Ehmt2Q9Z148 1263 aaKnown RBP22.55■■□□□ 1.2
Rab3d-201ENSMUST00000115351 Abcc8B2RUS7 1588 aa22.53■■□□□ 1.2
Rab3d-201ENSMUST00000115351 Gm35339A0A140LHH9 1649 aa22.48■■□□□ 1.19
Rab3d-201ENSMUST00000115351 Ccdc136Q3TVA9 1136 aa22.36■■□□□ 1.17
Rab3d-201ENSMUST00000115351 Ccdc180J3QNE4 1664 aa21.93■■□□□ 1.1
Rab3d-201ENSMUST00000115351 Rtl1Q7M732 1744 aa21.89■■□□□ 1.09
Rab3d-201ENSMUST00000115351 Rpgrip1Q9EPQ2 1331 aa21.77■■□□□ 1.08
Rab3d-201ENSMUST00000115351 Trim41Q5NCC3 630 aa21.63■■□□□ 1.05
Rab3d-201ENSMUST00000115351 Acin1Q9JIX8 1338 aaKnown RBP21.51■■□□□ 1.03
Rab3d-201ENSMUST00000115351 Gab3Q8BSM5 595 aa21.44■■□□□ 1.02
Rab3d-201ENSMUST00000115351 Cngb1E1AZ71 1325 aa21.41■■□□□ 1.02
Rab3d-201ENSMUST00000115351 HrcG5E8J6 738 aa21.34■■□□□ 1.01
Rab3d-201ENSMUST00000115351 Zcchc6Q5BLK4 1491 aaKnown RBP21.21■□□□□ 0.99
Rab3d-201ENSMUST00000115351 Rb1cc1Q9ESK9 1588 aa21.13■□□□□ 0.97
Rab3d-201ENSMUST00000115351 Esf1Q3V1V3 845 aaKnown RBP21.04■□□□□ 0.96
Rab3d-201ENSMUST00000115351 Dcaf1Q80TR8 1506 aa21.02■□□□□ 0.96
Rab3d-201ENSMUST00000115351 Zeb1Q64318 1117 aa21.02■□□□□ 0.96
Rab3d-201ENSMUST00000115351 Pcgf6Q99NA9 353 aa20.98■□□□□ 0.95
Rab3d-201ENSMUST00000115351 Chic1Q8CBW7 227 aa20.77■□□□□ 0.92
Rab3d-201ENSMUST00000115351 ScribQ80U72 1612 aa20.77■□□□□ 0.92
Rab3d-201ENSMUST00000115351 Supt5hO55201 1082 aaKnown RBP20.75■□□□□ 0.91
Rab3d-201ENSMUST00000115351 Kdm5dQ62240 1548 aa20.73■□□□□ 0.91
Rab3d-201ENSMUST00000115351 Baz1aO88379 1555 aa20.7■□□□□ 0.9
Rab3d-201ENSMUST00000115351 Myt1lP97500 1187 aa20.67■□□□□ 0.9
Rab3d-201ENSMUST00000115351 UbtfP25976 765 aaKnown RBP20.6■□□□□ 0.89
Rab3d-201ENSMUST00000115351 Wdr66E9Q743 1299 aa20.53■□□□□ 0.88
Rab3d-201ENSMUST00000115351 NacadQ5SWP3 1504 aa20.51■□□□□ 0.87
Rab3d-201ENSMUST00000115351 Cep164Q5DU05 1446 aa20.5■□□□□ 0.87
Rab3d-201ENSMUST00000115351 Mier1Q5UAK0 511 aa20.45■□□□□ 0.86
Rab3d-201ENSMUST00000115351 Ppargc1bQ8VHJ7 1014 aa20.43■□□□□ 0.86
Rab3d-201ENSMUST00000115351 Npm2Q80W85 207 aa20.42■□□□□ 0.86
Rab3d-201ENSMUST00000115351 Rsf1E9PWW9 1441 aaKnown RBP20.33■□□□□ 0.85
Rab3d-201ENSMUST00000115351 NefmP08553 848 aa20.3■□□□□ 0.84
Rab3d-201ENSMUST00000115351 Las1lA2BE28 776 aaKnown RBP20.26■□□□□ 0.83
Rab3d-201ENSMUST00000115351 Brd4Q9ESU6 1400 aaKnown RBP20.22■□□□□ 0.83
Rab3d-201ENSMUST00000115351 Ccdc88bQ4QRL3 1481 aa20.17■□□□□ 0.82
Rab3d-201ENSMUST00000115351 Neurod1Q60867 357 aa20.15■□□□□ 0.82
Rab3d-201ENSMUST00000115351 Il27Q8K3I6 234 aa20.14■□□□□ 0.82
Rab3d-201ENSMUST00000115351 Sall2Q9QX96 1004 aa20.12■□□□□ 0.81
Rab3d-201ENSMUST00000115351 Smarca2Q6DIC0 1577 aa20.1■□□□□ 0.81
Rab3d-201ENSMUST00000115351 Cecr2E9Q2Z1 1453 aa20.09■□□□□ 0.81
Rab3d-201ENSMUST00000115351 Ap3b1Q9Z1T1 1105 aa20.06■□□□□ 0.8
Rab3d-201ENSMUST00000115351 Plekhg3Q4VAC9 1341 aa20.03■□□□□ 0.8
Rab3d-201ENSMUST00000115351 Golga3P55937 1487 aa20.01■□□□□ 0.79
Rab3d-201ENSMUST00000115351 Sycp2Q9CUU3 1500 aa19.98■□□□□ 0.79
Rab3d-201ENSMUST00000115351 Crybg2B7ZCC2 1516 aa19.85■□□□□ 0.77
Rab3d-201ENSMUST00000115351 Aebp2Q9Z248 504 aaKnown RBP19.84■□□□□ 0.77
Rab3d-201ENSMUST00000115351 Synj1Q8CHC4 1574 aa19.79■□□□□ 0.76
Rab3d-201ENSMUST00000115351 Eid3Q3V124 375 aa19.77■□□□□ 0.76
Rab3d-201ENSMUST00000115351 Nop58Q6DFW4 536 aaKnown RBP19.75■□□□□ 0.75
Rab3d-201ENSMUST00000115351 Cdk11bP24788 784 aaKnown RBP19.74■□□□□ 0.75
Rab3d-201ENSMUST00000115351 TonslQ6NZL6 1363 aa19.73■□□□□ 0.75
Rab3d-201ENSMUST00000115351 Ube2uB1AUC4 352 aa19.68■□□□□ 0.74
Rab3d-201ENSMUST00000115351 CftrP26361 1476 aa19.68■□□□□ 0.74
Rab3d-201ENSMUST00000115351 CenpbP27790 599 aa19.67■□□□□ 0.74
Rab3d-201ENSMUST00000115351 Clip1Q922J3 1391 aa19.66■□□□□ 0.74
Rab3d-201ENSMUST00000115351 Mapk8ip2Q9ERE9 830 aa19.65■□□□□ 0.74
Rab3d-201ENSMUST00000115351 DiexfQ8BTT6 772 aaKnown RBP19.64■□□□□ 0.74
Rab3d-201ENSMUST00000115351 Csrnp3P59055 597 aa19.63■□□□□ 0.73
Rab3d-201ENSMUST00000115351 Fam50aQ9WV03 339 aaKnown RBP19.63■□□□□ 0.73
Rab3d-201ENSMUST00000115351 Gm38655A0A286YDK6 273 aa19.63■□□□□ 0.73
Rab3d-201ENSMUST00000115351 Lmod2Q3UHZ5 550 aa19.58■□□□□ 0.73
Rab3d-201ENSMUST00000115351 ClspnQ80YR7 1315 aa19.56■□□□□ 0.72
Rab3d-201ENSMUST00000115351 1700123L14RikQ3V2K7 440 aa19.47■□□□□ 0.71
Rab3d-201ENSMUST00000115351 Cep162Q6ZQ06 1403 aa19.44■□□□□ 0.7
Rab3d-201ENSMUST00000115351 Slc24a1Q91WD8 1130 aa19.42■□□□□ 0.7
Rab3d-201ENSMUST00000115351 Rapgef2Q8CHG7 1496 aa19.42■□□□□ 0.7
Rab3d-201ENSMUST00000115351 Anks4bQ8K3X6 423 aa19.42■□□□□ 0.7
Rab3d-201ENSMUST00000115351 BicraF8VPZ9 1578 aa19.4■□□□□ 0.7
Rab3d-201ENSMUST00000115351 NclP09405 707 aaKnown RBP19.39■□□□□ 0.69
Rab3d-201ENSMUST00000115351 Cc2d2aQ8CFW7 1633 aa19.37■□□□□ 0.69
Rab3d-201ENSMUST00000115351 Fmn1Q05860 1466 aa19.32■□□□□ 0.68
Rab3d-201ENSMUST00000115351 Cttnbp2B9EJA2 1648 aa19.28■□□□□ 0.68
Rab3d-201ENSMUST00000115351 Setd5Q5XJV7 1441 aa19.26■□□□□ 0.67
Rab3d-201ENSMUST00000115351 Myt1Q8CFC2 1127 aa19.24■□□□□ 0.67
Rab3d-201ENSMUST00000115351 Smarca4Q3TKT4 1613 aaKnown RBP19.24■□□□□ 0.67
Rab3d-201ENSMUST00000115351 Kif15Q6P9L6 1387 aa19.23■□□□□ 0.67
Rab3d-201ENSMUST00000115351 Npm1Q61937 292 aaKnown RBP19.22■□□□□ 0.67
Rab3d-201ENSMUST00000115351 BlmO88700 1416 aa19.2■□□□□ 0.66
Rab3d-201ENSMUST00000115351 Top2bQ64511 1612 aa19.15■□□□□ 0.66
Rab3d-201ENSMUST00000115351 Eea1Q8BL66 1411 aa19.12■□□□□ 0.65
Rab3d-201ENSMUST00000115351 Bcl11aQ9QYE3 773 aa19.08■□□□□ 0.64
Rab3d-201ENSMUST00000115351 Ubl4bQ9CQ84 188 aa19.07■□□□□ 0.64
Rab3d-201ENSMUST00000115351 Chic2Q9D9G3 165 aa19.07■□□□□ 0.64
Rab3d-201ENSMUST00000115351 Top2aQ01320 1528 aaKnown RBP19.06■□□□□ 0.64
Rab3d-201ENSMUST00000115351 Iqgap2Q3UQ44 1575 aa19.04■□□□□ 0.64
Rab3d-201ENSMUST00000115351 Eif5bQ05D44 1216 aaKnown RBP18.99■□□□□ 0.63
Rab3d-201ENSMUST00000115351 SafbD3YXK2 937 aaKnown RBP18.98■□□□□ 0.63
Rab3d-201ENSMUST00000115351 PtprkP35822 1457 aa18.96■□□□□ 0.63
Rab3d-201ENSMUST00000115351 Hnrnpul2Q00PI9 745 aaKnown RBP18.95■□□□□ 0.62
Rab3d-201ENSMUST00000115351 Hspa5P20029 655 aaKnown RBP18.93■□□□□ 0.62
Rab3d-201ENSMUST00000115351 Atad2bE9Q166 1460 aaKnown RBP18.93■□□□□ 0.62
Rab3d-201ENSMUST00000115351 Aplp2Q06335 707 aa18.92■□□□□ 0.62
Rab3d-201ENSMUST00000115351 Pds5bQ4VA53 1446 aaKnown RBP18.89■□□□□ 0.62
Rab3d-201ENSMUST00000115351 Amer1Q7TS75 1132 aa18.87■□□□□ 0.61
Rab3d-201ENSMUST00000115351 Stra8P70278 393 aa18.86■□□□□ 0.61
Rab3d-201ENSMUST00000115351 Arhgap35Q91YM2 1499 aa18.86■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms