RNA–Protein interactions for RNA: ENSMUST00000114993.8

Cnot4-203, Transcript of CCR4-NOT transcription complex subunit 4, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cnot4, Length 3,473 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot4-203ENSMUST00000114993 Rpgrip1Q9EPQ2 1331 aa9.29□□□□□ -0.92
Cnot4-203ENSMUST00000114993 Rtl1Q7M732 1744 aa9.25□□□□□ -0.93
Cnot4-203ENSMUST00000114993 Ccdc180J3QNE4 1664 aa9.04□□□□□ -0.96
Cnot4-203ENSMUST00000114993 Gm35339A0A140LHH9 1649 aa8.95□□□□□ -0.98
Cnot4-203ENSMUST00000114993 NischQ80TM9 1593 aa8.87□□□□□ -0.99
Cnot4-203ENSMUST00000114993 Acin1Q9JIX8 1338 aaKnown RBP8.86□□□□□ -0.99
Cnot4-203ENSMUST00000114993 Abcc9P70170 1546 aa8.77□□□□□ -1.01
Cnot4-203ENSMUST00000114993 Pcgf6Q99NA9 353 aa8.74□□□□□ -1.01
Cnot4-203ENSMUST00000114993 Mapk8ip2Q9ERE9 830 aa8.74□□□□□ -1.01
Cnot4-203ENSMUST00000114993 Dcaf1Q80TR8 1506 aa8.68□□□□□ -1.02
Cnot4-203ENSMUST00000114993 Zcchc6Q5BLK4 1491 aaKnown RBP8.68□□□□□ -1.02
Cnot4-203ENSMUST00000114993 Trim41Q5NCC3 630 aa8.6□□□□□ -1.03
Cnot4-203ENSMUST00000114993 Chic1Q8CBW7 227 aa8.53□□□□□ -1.04
Cnot4-203ENSMUST00000114993 Myt1Q8CFC2 1127 aa8.5□□□□□ -1.05
Cnot4-203ENSMUST00000114993 Neurod1Q60867 357 aa8.43□□□□□ -1.06
Cnot4-203ENSMUST00000114993 Las1lA2BE28 776 aaKnown RBP8.42□□□□□ -1.06
Cnot4-203ENSMUST00000114993 Ube2uB1AUC4 352 aa8.41□□□□□ -1.06
Cnot4-203ENSMUST00000114993 Abcc8B2RUS7 1588 aa8.37□□□□□ -1.07
Cnot4-203ENSMUST00000114993 Supt5hO55201 1082 aaKnown RBP8.35□□□□□ -1.07
Cnot4-203ENSMUST00000114993 HrcG5E8J6 738 aa8.32□□□□□ -1.08
Cnot4-203ENSMUST00000114993 CenpbP27790 599 aa8.31□□□□□ -1.08
Cnot4-203ENSMUST00000114993 1700123L14RikQ3V2K7 440 aa8.31□□□□□ -1.08
Cnot4-203ENSMUST00000114993 Anks4bQ8K3X6 423 aa8.24□□□□□ -1.09
Cnot4-203ENSMUST00000114993 DiexfQ8BTT6 772 aaKnown RBP8.19□□□□□ -1.1
Cnot4-203ENSMUST00000114993 Aplp2Q06335 707 aa8.19□□□□□ -1.1
Cnot4-203ENSMUST00000114993 Rhox8Q6VSS7 320 aa8.17□□□□□ -1.1
Cnot4-203ENSMUST00000114993 Ehmt2Q9Z148 1263 aaKnown RBP8.12□□□□□ -1.11
Cnot4-203ENSMUST00000114993 Bcl11aQ9QYE3 773 aa8.12□□□□□ -1.11
Cnot4-203ENSMUST00000114993 Csrnp3P59055 597 aa8.11□□□□□ -1.11
Cnot4-203ENSMUST00000114993 Cngb1E1AZ71 1325 aa8.09□□□□□ -1.11
Cnot4-203ENSMUST00000114993 Sall2Q9QX96 1004 aa8.01□□□□□ -1.13
Cnot4-203ENSMUST00000114993 Cep164Q5DU05 1446 aa8□□□□□ -1.13
Cnot4-203ENSMUST00000114993 NefmP08553 848 aa7.98□□□□□ -1.13
Cnot4-203ENSMUST00000114993 ScribQ80U72 1612 aa7.96□□□□□ -1.14
Cnot4-203ENSMUST00000114993 Plppr3Q7TPB0 716 aa7.93□□□□□ -1.14
Cnot4-203ENSMUST00000114993 Phf23Q8BSN5 401 aa7.9□□□□□ -1.14
Cnot4-203ENSMUST00000114993 Baz1bQ9Z277 1479 aa7.88□□□□□ -1.15
Cnot4-203ENSMUST00000114993 PrkcshO08795 521 aa7.85□□□□□ -1.15
Cnot4-203ENSMUST00000114993 Cdk11bP24788 784 aaKnown RBP7.83□□□□□ -1.16
Cnot4-203ENSMUST00000114993 Zeb1Q64318 1117 aa7.83□□□□□ -1.16
Cnot4-203ENSMUST00000114993 Rb1cc1Q9ESK9 1588 aa7.83□□□□□ -1.16
Cnot4-203ENSMUST00000114993 Kcna4Q61423 654 aa7.82□□□□□ -1.16
Cnot4-203ENSMUST00000114993 ClspnQ80YR7 1315 aa7.8□□□□□ -1.16
Cnot4-203ENSMUST00000114993 Baz1aO88379 1555 aa7.8□□□□□ -1.16
Cnot4-203ENSMUST00000114993 Mier1Q5UAK0 511 aa7.79□□□□□ -1.16
Cnot4-203ENSMUST00000114993 Nop58Q6DFW4 536 aaKnown RBP7.79□□□□□ -1.16
Cnot4-203ENSMUST00000114993 Thoc2B1AZI6 1594 aaKnown RBP7.78□□□□□ -1.16
Cnot4-203ENSMUST00000114993 Fam71e1A1L3C1 212 aa7.78□□□□□ -1.16
Cnot4-203ENSMUST00000114993 Aebp2Q9Z248 504 aaKnown RBP7.73□□□□□ -1.17
Cnot4-203ENSMUST00000114993 Rtl5Q5DTT4 599 aa7.72□□□□□ -1.17
Cnot4-203ENSMUST00000114993 Ifnlr1Q8CGK5 535 aa7.72□□□□□ -1.17
Cnot4-203ENSMUST00000114993 Smarca2Q6DIC0 1577 aa7.71□□□□□ -1.17
Cnot4-203ENSMUST00000114993 Amer1Q7TS75 1132 aa7.69□□□□□ -1.18
Cnot4-203ENSMUST00000114993 Gm38655A0A286YDK6 273 aa7.68□□□□□ -1.18
Cnot4-203ENSMUST00000114993 Tnnt3Q9QZ47 272 aa7.67□□□□□ -1.18
Cnot4-203ENSMUST00000114993 NacadQ5SWP3 1504 aa7.66□□□□□ -1.18
Cnot4-203ENSMUST00000114993 Rsf1E9PWW9 1441 aaKnown RBP7.65□□□□□ -1.18
Cnot4-203ENSMUST00000114993 Crybg2B7ZCC2 1516 aa7.63□□□□□ -1.19
Cnot4-203ENSMUST00000114993 Fgd1P52734 960 aa7.62□□□□□ -1.19
Cnot4-203ENSMUST00000114993 Hnrnpul2Q00PI9 745 aaKnown RBP7.62□□□□□ -1.19
Cnot4-203ENSMUST00000114993 Hdac5Q9Z2V6 1113 aa7.6□□□□□ -1.19
Cnot4-203ENSMUST00000114993 Anp32aO35381 247 aa7.59□□□□□ -1.19
Cnot4-203ENSMUST00000114993 SafbD3YXK2 937 aaKnown RBP7.58□□□□□ -1.2
Cnot4-203ENSMUST00000114993 Gab3Q8BSM5 595 aa7.57□□□□□ -1.2
Cnot4-203ENSMUST00000114993 NrdcQ8BHG1 1161 aa7.57□□□□□ -1.2
Cnot4-203ENSMUST00000114993 Kdm5bQ80Y84 1544 aa7.56□□□□□ -1.2
Cnot4-203ENSMUST00000114993 Wdr66E9Q743 1299 aa7.56□□□□□ -1.2
Cnot4-203ENSMUST00000114993 Dnajc5P60904 198 aa7.54□□□□□ -1.2
Cnot4-203ENSMUST00000114993 Ccdc136Q3TVA9 1136 aa7.54□□□□□ -1.2
Cnot4-203ENSMUST00000114993 Ncapd3Q6ZQK0 1506 aa7.53□□□□□ -1.2
Cnot4-203ENSMUST00000114993 Top2bQ64511 1612 aa7.53□□□□□ -1.2
Cnot4-203ENSMUST00000114993 Znf710Q3U288 666 aa7.53□□□□□ -1.2
Cnot4-203ENSMUST00000114993 Ccdc88bQ4QRL3 1481 aa7.52□□□□□ -1.21
Cnot4-203ENSMUST00000114993 TonslQ6NZL6 1363 aa7.5□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Kdm5dQ62240 1548 aa7.49□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Rpap1Q80TE0 1409 aa7.49□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Eif4g1Q6NZJ6 1600 aaKnown RBP7.48□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Rapgef2Q8CHG7 1496 aa7.48□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Ccdc9Q8VC31 543 aaKnown RBP7.48□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Nolc1E9Q5C9 702 aaKnown RBP7.48□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Pknox2Q8BG99 474 aa7.47□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Golga3P55937 1487 aa7.47□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Ppargc1bQ8VHJ7 1014 aa7.47□□□□□ -1.21
Cnot4-203ENSMUST00000114993 TchhA0A0B4J1F9 1599 aa7.47□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Pelp1Q9DBD5 1123 aaKnown RBP7.46□□□□□ -1.21
Cnot4-203ENSMUST00000114993 Upf2A2AT37 1269 aaKnown RBP7.46□□□□□ -1.22
Cnot4-203ENSMUST00000114993 Gtf3c3Q3TMP1 882 aa7.46□□□□□ -1.22
Cnot4-203ENSMUST00000114993 Supt16hQ920B9 1047 aa7.46□□□□□ -1.22
Cnot4-203ENSMUST00000114993 Sycp2Q9CUU3 1500 aa7.45□□□□□ -1.22
Cnot4-203ENSMUST00000114993 Fam135aQ6NS59 1506 aa7.45□□□□□ -1.22
Cnot4-203ENSMUST00000114993 Washc2Q6PGL7 1334 aa7.44□□□□□ -1.22
Cnot4-203ENSMUST00000114993 BicraF8VPZ9 1578 aa7.43□□□□□ -1.22
Cnot4-203ENSMUST00000114993 Ccdc27Q3V036 639 aa7.39□□□□□ -1.23
Cnot4-203ENSMUST00000114993 Ipo4Q8VI75 1082 aa7.39□□□□□ -1.23
Cnot4-203ENSMUST00000114993 Egfem1Q8C088 590 aa7.38□□□□□ -1.23
Cnot4-203ENSMUST00000114993 Camsap2Q8C1B1 1461 aa7.37□□□□□ -1.23
Cnot4-203ENSMUST00000114993 Irx3P81067 507 aa7.37□□□□□ -1.23
Cnot4-203ENSMUST00000114993 Kcnn1Q9EQR3 537 aa7.37□□□□□ -1.23
Cnot4-203ENSMUST00000114993 Calr4Q3TQS0 420 aa7.36□□□□□ -1.23
Cnot4-203ENSMUST00000114993 Plcd4Q8K3R3 807 aa7.36□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 75.5 ms