RNA–Protein interactions for RNA: ENSMUST00000111760.2

Nckap1-202, Transcript of Nck-associated protein 1, mousemouse

TSL 1 (best) BASIC

Gene Nckap1, Length 4,597 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-202ENSMUST00000111760 Rhox8Q6VSS7 320 aa37,31■■■■□ 3,56
Nckap1-202ENSMUST00000111760 NischQ80TM9 1593 aa34,05■■■■□ 3,04
Nckap1-202ENSMUST00000111760 Ccdc136Q3TVA9 1136 aa33,55■■■□□ 2,96
Nckap1-202ENSMUST00000111760 Ehmt2Q9Z148 1263 aaKnown RBP33,52■■■□□ 2,96
Nckap1-202ENSMUST00000111760 Rpgrip1Q9EPQ2 1331 aa33,42■■■□□ 2,94
Nckap1-202ENSMUST00000111760 Cngb1E1AZ71 1325 aa32,81■■■□□ 2,84
Nckap1-202ENSMUST00000111760 Esf1Q3V1V3 845 aaKnown RBP32,8■■■□□ 2,84
Nckap1-202ENSMUST00000111760 Trim41Q5NCC3 630 aa32,63■■■□□ 2,81
Nckap1-202ENSMUST00000111760 Gab3Q8BSM5 595 aa32,5■■■□□ 2,79
Nckap1-202ENSMUST00000111760 Wdr66E9Q743 1299 aa32,12■■■□□ 2,73
Nckap1-202ENSMUST00000111760 Zeb1Q64318 1117 aa32,04■■■□□ 2,72
Nckap1-202ENSMUST00000111760 Las1lA2BE28 776 aaKnown RBP31,93■■■□□ 2,7
Nckap1-202ENSMUST00000111760 Abcc9P70170 1546 aa31,93■■■□□ 2,7
Nckap1-202ENSMUST00000111760 Npm2Q80W85 207 aa31,9■■■□□ 2,7
Nckap1-202ENSMUST00000111760 Myt1lP97500 1187 aa31,81■■■□□ 2,68
Nckap1-202ENSMUST00000111760 Ube2uB1AUC4 352 aa31,62■■■□□ 2,65
Nckap1-202ENSMUST00000111760 HrcG5E8J6 738 aa31,46■■■□□ 2,63
Nckap1-202ENSMUST00000111760 Acin1Q9JIX8 1338 aaKnown RBP31,41■■■□□ 2,62
Nckap1-202ENSMUST00000111760 Ccdc180J3QNE4 1664 aa31,41■■■□□ 2,62
Nckap1-202ENSMUST00000111760 Abcc8B2RUS7 1588 aa31,33■■■□□ 2,61
Nckap1-202ENSMUST00000111760 Zcchc6Q5BLK4 1491 aaKnown RBP31,29■■■□□ 2,6
Nckap1-202ENSMUST00000111760 UbtfP25976 765 aaKnown RBP31,2■■■□□ 2,58
Nckap1-202ENSMUST00000111760 Gm35339A0A140LHH9 1649 aa31,12■■■□□ 2,57
Nckap1-202ENSMUST00000111760 Rtl1Q7M732 1744 aa31,03■■■□□ 2,56
Nckap1-202ENSMUST00000111760 Il27Q8K3I6 234 aa31,02■■■□□ 2,56
Nckap1-202ENSMUST00000111760 NefmP08553 848 aa30,93■■■□□ 2,54
Nckap1-202ENSMUST00000111760 Pelp1Q9DBD5 1123 aaKnown RBP30,83■■■□□ 2,53
Nckap1-202ENSMUST00000111760 CenpbP27790 599 aa30,52■■■□□ 2,48
Nckap1-202ENSMUST00000111760 Pcgf6Q99NA9 353 aa30,49■■■□□ 2,47
Nckap1-202ENSMUST00000111760 Slc24a1Q91WD8 1130 aa30,43■■■□□ 2,46
Nckap1-202ENSMUST00000111760 Ap3b1Q9Z1T1 1105 aa30,4■■■□□ 2,46
Nckap1-202ENSMUST00000111760 Cdk11bP24788 784 aaKnown RBP30,2■■■□□ 2,42
Nckap1-202ENSMUST00000111760 Fam50aQ9WV03 339 aaKnown RBP30,19■■■□□ 2,42
Nckap1-202ENSMUST00000111760 Stra8P70278 393 aa30,19■■■□□ 2,42
Nckap1-202ENSMUST00000111760 Ppargc1bQ8VHJ7 1014 aa30,15■■■□□ 2,42
Nckap1-202ENSMUST00000111760 Supt5hO55201 1082 aaKnown RBP30■■■□□ 2,39
Nckap1-202ENSMUST00000111760 Mier1Q5UAK0 511 aa29,98■■■□□ 2,39
Nckap1-202ENSMUST00000111760 Nop58Q6DFW4 536 aaKnown RBP29,93■■■□□ 2,38
Nckap1-202ENSMUST00000111760 Rb1cc1Q9ESK9 1588 aa29,88■■■□□ 2,37
Nckap1-202ENSMUST00000111760 Chic1Q8CBW7 227 aa29,88■■■□□ 2,37
Nckap1-202ENSMUST00000111760 Brd4Q9ESU6 1400 aaKnown RBP29,83■■■□□ 2,37
Nckap1-202ENSMUST00000111760 Npm1Q61937 292 aaKnown RBP29,82■■■□□ 2,36
Nckap1-202ENSMUST00000111760 Neurod1Q60867 357 aa29,81■■■□□ 2,36
Nckap1-202ENSMUST00000111760 NclP09405 707 aaKnown RBP29,81■■■□□ 2,36
Nckap1-202ENSMUST00000111760 Amer1Q7TS75 1132 aa29,81■■■□□ 2,36
Nckap1-202ENSMUST00000111760 Plekhg3Q4VAC9 1341 aa29,79■■■□□ 2,36
Nckap1-202ENSMUST00000111760 Dcaf1Q80TR8 1506 aa29,79■■■□□ 2,36
Nckap1-202ENSMUST00000111760 TonslQ6NZL6 1363 aa29,72■■■□□ 2,35
Nckap1-202ENSMUST00000111760 Lmod2Q3UHZ5 550 aa29,69■■■□□ 2,34
Nckap1-202ENSMUST00000111760 Cep164Q5DU05 1446 aa29,61■■■□□ 2,33
Nckap1-202ENSMUST00000111760 NrdcQ8BHG1 1161 aa29,6■■■□□ 2,33
Nckap1-202ENSMUST00000111760 Eif5bQ05D44 1216 aaKnown RBP29,49■■■□□ 2,31
Nckap1-202ENSMUST00000111760 Tnnt3Q9QZ47 272 aa29,49■■■□□ 2,31
Nckap1-202ENSMUST00000111760 NacadQ5SWP3 1504 aa29,46■■■□□ 2,31
Nckap1-202ENSMUST00000111760 Ttbk1Q6PCN3 1308 aa29,42■■■□□ 2,3
Nckap1-202ENSMUST00000111760 Anp32bQ9EST5 272 aaKnown RBP29,37■■■□□ 2,29
Nckap1-202ENSMUST00000111760 Clip1Q922J3 1391 aa29,31■■■□□ 2,28
Nckap1-202ENSMUST00000111760 Eid3Q3V124 375 aa29,27■■■□□ 2,28
Nckap1-202ENSMUST00000111760 Baz1aO88379 1555 aa29,24■■■□□ 2,27
Nckap1-202ENSMUST00000111760 Zbtb7cQ8VCZ7 619 aa29,2■■■□□ 2,27
Nckap1-202ENSMUST00000111760 Os9Q8K2C7 672 aa29,19■■■□□ 2,26
Nckap1-202ENSMUST00000111760 NeflP08551 543 aa29,15■■■□□ 2,26
Nckap1-202ENSMUST00000111760 Ubl4bQ9CQ84 188 aa29,13■■■□□ 2,25
Nckap1-202ENSMUST00000111760 ClspnQ80YR7 1315 aa29,12■■■□□ 2,25
Nckap1-202ENSMUST00000111760 Myt1Q8CFC2 1127 aa29,06■■■□□ 2,24
Nckap1-202ENSMUST00000111760 4933416C03RikQ3V063 378 aa29,05■■■□□ 2,24
Nckap1-202ENSMUST00000111760 Sall2Q9QX96 1004 aa29■■■□□ 2,23
Nckap1-202ENSMUST00000111760 Mapk8ip2Q9ERE9 830 aa28,99■■■□□ 2,23
Nckap1-202ENSMUST00000111760 Kdm5dQ62240 1548 aa28,98■■■□□ 2,23
Nckap1-202ENSMUST00000111760 Hnrnpul2Q00PI9 745 aaKnown RBP28,96■■■□□ 2,23
Nckap1-202ENSMUST00000111760 Golga3P55937 1487 aa28,92■■■□□ 2,22
Nckap1-202ENSMUST00000111760 Ifnlr1Q8CGK5 535 aa28,91■■■□□ 2,22
Nckap1-202ENSMUST00000111760 Fkbp15Q6P9Q6 1216 aaKnown RBP28,89■■■□□ 2,22
Nckap1-202ENSMUST00000111760 Zbtb4Q5F293 982 aa28,76■■■□□ 2,2
Nckap1-202ENSMUST00000111760 Rsf1E9PWW9 1441 aaKnown RBP28,72■■■□□ 2,19
Nckap1-202ENSMUST00000111760 Gm38655A0A286YDK6 273 aa28,72■■■□□ 2,19
Nckap1-202ENSMUST00000111760 BlmO88700 1416 aa28,7■■■□□ 2,19
Nckap1-202ENSMUST00000111760 Chic2Q9D9G3 165 aa28,66■■■□□ 2,18
Nckap1-202ENSMUST00000111760 Setd5Q5XJV7 1441 aa28,65■■■□□ 2,18
Nckap1-202ENSMUST00000111760 Kif15Q6P9L6 1387 aa28,65■■■□□ 2,18
Nckap1-202ENSMUST00000111760 Ccer2J3QPU5 274 aa28,61■■■□□ 2,17
Nckap1-202ENSMUST00000111760 Erich6D3Z6S9 713 aa28,58■■■□□ 2,17
Nckap1-202ENSMUST00000111760 Csrnp3P59055 597 aa28,55■■■□□ 2,16
Nckap1-202ENSMUST00000111760 Anp32aO35381 247 aa28,52■■■□□ 2,16
Nckap1-202ENSMUST00000111760 Anks4bQ8K3X6 423 aa28,5■■■□□ 2,15
Nckap1-202ENSMUST00000111760 Rtl5Q5DTT4 599 aa28,48■■■□□ 2,15
Nckap1-202ENSMUST00000111760 Prdm10Q3UTQ7 1184 aa28,38■■■□□ 2,13
Nckap1-202ENSMUST00000111760 Ccdc88bQ4QRL3 1481 aa28,36■■■□□ 2,13
Nckap1-202ENSMUST00000111760 Gm13697A2AK42 830 aa28,35■■■□□ 2,13
Nckap1-202ENSMUST00000111760 4930567H17RikQ3V0K5 233 aa28,31■■■□□ 2,12
Nckap1-202ENSMUST00000111760 Aebp2Q9Z248 504 aaKnown RBP28,31■■■□□ 2,12
Nckap1-202ENSMUST00000111760 Eea1Q8BL66 1411 aa28,3■■■□□ 2,12
Nckap1-202ENSMUST00000111760 Atp1b4Q99ME6 356 aa28,26■■■□□ 2,12
Nckap1-202ENSMUST00000111760 Ercc6F8VPZ5 1481 aa28,25■■■□□ 2,11
Nckap1-202ENSMUST00000111760 DaxxO35613 739 aa28,25■■■□□ 2,11
Nckap1-202ENSMUST00000111760 Ccdc18Q640L5 1455 aa28,24■■■□□ 2,11
Nckap1-202ENSMUST00000111760 Sycp2Q9CUU3 1500 aa28,19■■■□□ 2,1
Nckap1-202ENSMUST00000111760 Nlrp6Q91WS2 869 aa28,18■■■□□ 2,1
Nckap1-202ENSMUST00000111760 Aplp2Q06335 707 aa28,13■■■□□ 2,09
Nckap1-202ENSMUST00000111760 Polr3glQ8R0C0 218 aa28,12■■■□□ 2,09
Retrieved 100 of 22,080 RNA–protein pairs in 24,7 ms