RNA–Protein interactions for RNA: ENSMUST00000111760.2

Nckap1-202, Transcript of Nck-associated protein 1, mousemouse

TSL 1 (best) BASIC

Gene Nckap1, Length 4,597 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-202ENSMUST00000111760 Rhox8Q6VSS7 320 aa37.31■■■■□ 3.56
Nckap1-202ENSMUST00000111760 NischQ80TM9 1593 aa34.05■■■■□ 3.04
Nckap1-202ENSMUST00000111760 Ccdc136Q3TVA9 1136 aa33.55■■■□□ 2.96
Nckap1-202ENSMUST00000111760 Ehmt2Q9Z148 1263 aaKnown RBP33.52■■■□□ 2.96
Nckap1-202ENSMUST00000111760 Rpgrip1Q9EPQ2 1331 aa33.42■■■□□ 2.94
Nckap1-202ENSMUST00000111760 Cngb1E1AZ71 1325 aa32.81■■■□□ 2.84
Nckap1-202ENSMUST00000111760 Esf1Q3V1V3 845 aaKnown RBP32.8■■■□□ 2.84
Nckap1-202ENSMUST00000111760 Trim41Q5NCC3 630 aa32.63■■■□□ 2.81
Nckap1-202ENSMUST00000111760 Gab3Q8BSM5 595 aa32.5■■■□□ 2.79
Nckap1-202ENSMUST00000111760 Wdr66E9Q743 1299 aa32.12■■■□□ 2.73
Nckap1-202ENSMUST00000111760 Zeb1Q64318 1117 aa32.04■■■□□ 2.72
Nckap1-202ENSMUST00000111760 Las1lA2BE28 776 aaKnown RBP31.93■■■□□ 2.7
Nckap1-202ENSMUST00000111760 Abcc9P70170 1546 aa31.93■■■□□ 2.7
Nckap1-202ENSMUST00000111760 Npm2Q80W85 207 aa31.9■■■□□ 2.7
Nckap1-202ENSMUST00000111760 Myt1lP97500 1187 aa31.81■■■□□ 2.68
Nckap1-202ENSMUST00000111760 Ube2uB1AUC4 352 aa31.62■■■□□ 2.65
Nckap1-202ENSMUST00000111760 HrcG5E8J6 738 aa31.46■■■□□ 2.63
Nckap1-202ENSMUST00000111760 Acin1Q9JIX8 1338 aaKnown RBP31.41■■■□□ 2.62
Nckap1-202ENSMUST00000111760 Ccdc180J3QNE4 1664 aa31.41■■■□□ 2.62
Nckap1-202ENSMUST00000111760 Abcc8B2RUS7 1588 aa31.33■■■□□ 2.61
Nckap1-202ENSMUST00000111760 Zcchc6Q5BLK4 1491 aaKnown RBP31.29■■■□□ 2.6
Nckap1-202ENSMUST00000111760 UbtfP25976 765 aaKnown RBP31.2■■■□□ 2.58
Nckap1-202ENSMUST00000111760 Gm35339A0A140LHH9 1649 aa31.12■■■□□ 2.57
Nckap1-202ENSMUST00000111760 Rtl1Q7M732 1744 aa31.03■■■□□ 2.56
Nckap1-202ENSMUST00000111760 Il27Q8K3I6 234 aa31.02■■■□□ 2.56
Nckap1-202ENSMUST00000111760 NefmP08553 848 aa30.93■■■□□ 2.54
Nckap1-202ENSMUST00000111760 Pelp1Q9DBD5 1123 aaKnown RBP30.83■■■□□ 2.53
Nckap1-202ENSMUST00000111760 CenpbP27790 599 aa30.52■■■□□ 2.48
Nckap1-202ENSMUST00000111760 Pcgf6Q99NA9 353 aa30.49■■■□□ 2.47
Nckap1-202ENSMUST00000111760 Slc24a1Q91WD8 1130 aa30.43■■■□□ 2.46
Nckap1-202ENSMUST00000111760 Ap3b1Q9Z1T1 1105 aa30.4■■■□□ 2.46
Nckap1-202ENSMUST00000111760 Cdk11bP24788 784 aaKnown RBP30.2■■■□□ 2.42
Nckap1-202ENSMUST00000111760 Fam50aQ9WV03 339 aaKnown RBP30.19■■■□□ 2.42
Nckap1-202ENSMUST00000111760 Stra8P70278 393 aa30.19■■■□□ 2.42
Nckap1-202ENSMUST00000111760 Ppargc1bQ8VHJ7 1014 aa30.15■■■□□ 2.42
Nckap1-202ENSMUST00000111760 Supt5hO55201 1082 aaKnown RBP30■■■□□ 2.39
Nckap1-202ENSMUST00000111760 Mier1Q5UAK0 511 aa29.98■■■□□ 2.39
Nckap1-202ENSMUST00000111760 Nop58Q6DFW4 536 aaKnown RBP29.93■■■□□ 2.38
Nckap1-202ENSMUST00000111760 Rb1cc1Q9ESK9 1588 aa29.88■■■□□ 2.37
Nckap1-202ENSMUST00000111760 Chic1Q8CBW7 227 aa29.88■■■□□ 2.37
Nckap1-202ENSMUST00000111760 Brd4Q9ESU6 1400 aaKnown RBP29.83■■■□□ 2.37
Nckap1-202ENSMUST00000111760 Npm1Q61937 292 aaKnown RBP29.82■■■□□ 2.36
Nckap1-202ENSMUST00000111760 Neurod1Q60867 357 aa29.81■■■□□ 2.36
Nckap1-202ENSMUST00000111760 NclP09405 707 aaKnown RBP29.81■■■□□ 2.36
Nckap1-202ENSMUST00000111760 Amer1Q7TS75 1132 aa29.81■■■□□ 2.36
Nckap1-202ENSMUST00000111760 Plekhg3Q4VAC9 1341 aa29.79■■■□□ 2.36
Nckap1-202ENSMUST00000111760 Dcaf1Q80TR8 1506 aa29.79■■■□□ 2.36
Nckap1-202ENSMUST00000111760 TonslQ6NZL6 1363 aa29.72■■■□□ 2.35
Nckap1-202ENSMUST00000111760 Lmod2Q3UHZ5 550 aa29.69■■■□□ 2.34
Nckap1-202ENSMUST00000111760 Cep164Q5DU05 1446 aa29.61■■■□□ 2.33
Nckap1-202ENSMUST00000111760 NrdcQ8BHG1 1161 aa29.6■■■□□ 2.33
Nckap1-202ENSMUST00000111760 Eif5bQ05D44 1216 aaKnown RBP29.49■■■□□ 2.31
Nckap1-202ENSMUST00000111760 Tnnt3Q9QZ47 272 aa29.49■■■□□ 2.31
Nckap1-202ENSMUST00000111760 NacadQ5SWP3 1504 aa29.46■■■□□ 2.31
Nckap1-202ENSMUST00000111760 Ttbk1Q6PCN3 1308 aa29.42■■■□□ 2.3
Nckap1-202ENSMUST00000111760 Anp32bQ9EST5 272 aaKnown RBP29.37■■■□□ 2.29
Nckap1-202ENSMUST00000111760 Clip1Q922J3 1391 aa29.31■■■□□ 2.28
Nckap1-202ENSMUST00000111760 Eid3Q3V124 375 aa29.27■■■□□ 2.28
Nckap1-202ENSMUST00000111760 Baz1aO88379 1555 aa29.24■■■□□ 2.27
Nckap1-202ENSMUST00000111760 Zbtb7cQ8VCZ7 619 aa29.2■■■□□ 2.27
Nckap1-202ENSMUST00000111760 Os9Q8K2C7 672 aa29.19■■■□□ 2.26
Nckap1-202ENSMUST00000111760 NeflP08551 543 aa29.15■■■□□ 2.26
Nckap1-202ENSMUST00000111760 Ubl4bQ9CQ84 188 aa29.13■■■□□ 2.25
Nckap1-202ENSMUST00000111760 ClspnQ80YR7 1315 aa29.12■■■□□ 2.25
Nckap1-202ENSMUST00000111760 Myt1Q8CFC2 1127 aa29.06■■■□□ 2.24
Nckap1-202ENSMUST00000111760 4933416C03RikQ3V063 378 aa29.05■■■□□ 2.24
Nckap1-202ENSMUST00000111760 Sall2Q9QX96 1004 aa29■■■□□ 2.23
Nckap1-202ENSMUST00000111760 Mapk8ip2Q9ERE9 830 aa28.99■■■□□ 2.23
Nckap1-202ENSMUST00000111760 Kdm5dQ62240 1548 aa28.98■■■□□ 2.23
Nckap1-202ENSMUST00000111760 Hnrnpul2Q00PI9 745 aaKnown RBP28.96■■■□□ 2.23
Nckap1-202ENSMUST00000111760 Golga3P55937 1487 aa28.92■■■□□ 2.22
Nckap1-202ENSMUST00000111760 Ifnlr1Q8CGK5 535 aa28.91■■■□□ 2.22
Nckap1-202ENSMUST00000111760 Fkbp15Q6P9Q6 1216 aaKnown RBP28.89■■■□□ 2.22
Nckap1-202ENSMUST00000111760 Zbtb4Q5F293 982 aa28.76■■■□□ 2.2
Nckap1-202ENSMUST00000111760 Rsf1E9PWW9 1441 aaKnown RBP28.72■■■□□ 2.19
Nckap1-202ENSMUST00000111760 Gm38655A0A286YDK6 273 aa28.72■■■□□ 2.19
Nckap1-202ENSMUST00000111760 BlmO88700 1416 aa28.7■■■□□ 2.19
Nckap1-202ENSMUST00000111760 Chic2Q9D9G3 165 aa28.66■■■□□ 2.18
Nckap1-202ENSMUST00000111760 Setd5Q5XJV7 1441 aa28.65■■■□□ 2.18
Nckap1-202ENSMUST00000111760 Kif15Q6P9L6 1387 aa28.65■■■□□ 2.18
Nckap1-202ENSMUST00000111760 Ccer2J3QPU5 274 aa28.61■■■□□ 2.17
Nckap1-202ENSMUST00000111760 Erich6D3Z6S9 713 aa28.58■■■□□ 2.17
Nckap1-202ENSMUST00000111760 Csrnp3P59055 597 aa28.55■■■□□ 2.16
Nckap1-202ENSMUST00000111760 Anp32aO35381 247 aa28.52■■■□□ 2.16
Nckap1-202ENSMUST00000111760 Anks4bQ8K3X6 423 aa28.5■■■□□ 2.15
Nckap1-202ENSMUST00000111760 Rtl5Q5DTT4 599 aa28.48■■■□□ 2.15
Nckap1-202ENSMUST00000111760 Prdm10Q3UTQ7 1184 aa28.38■■■□□ 2.13
Nckap1-202ENSMUST00000111760 Ccdc88bQ4QRL3 1481 aa28.36■■■□□ 2.13
Nckap1-202ENSMUST00000111760 Gm13697A2AK42 830 aa28.35■■■□□ 2.13
Nckap1-202ENSMUST00000111760 4930567H17RikQ3V0K5 233 aa28.31■■■□□ 2.12
Nckap1-202ENSMUST00000111760 Aebp2Q9Z248 504 aaKnown RBP28.31■■■□□ 2.12
Nckap1-202ENSMUST00000111760 Eea1Q8BL66 1411 aa28.3■■■□□ 2.12
Nckap1-202ENSMUST00000111760 Atp1b4Q99ME6 356 aa28.26■■■□□ 2.12
Nckap1-202ENSMUST00000111760 Ercc6F8VPZ5 1481 aa28.25■■■□□ 2.11
Nckap1-202ENSMUST00000111760 DaxxO35613 739 aa28.25■■■□□ 2.11
Nckap1-202ENSMUST00000111760 Ccdc18Q640L5 1455 aa28.24■■■□□ 2.11
Nckap1-202ENSMUST00000111760 Sycp2Q9CUU3 1500 aa28.19■■■□□ 2.1
Nckap1-202ENSMUST00000111760 Nlrp6Q91WS2 869 aa28.18■■■□□ 2.1
Nckap1-202ENSMUST00000111760 Aplp2Q06335 707 aa28.13■■■□□ 2.09
Nckap1-202ENSMUST00000111760 Polr3glQ8R0C0 218 aa28.12■■■□□ 2.09
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms