RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Rhox8Q6VSS7 320 aa27.89■■■□□ 2.06
Sptbn4-204ENSMUST00000108364 Rpgrip1Q9EPQ2 1331 aa26.5■■□□□ 1.83
Sptbn4-204ENSMUST00000108364 Ehmt2Q9Z148 1263 aaKnown RBP25.96■■□□□ 1.75
Sptbn4-204ENSMUST00000108364 NischQ80TM9 1593 aa25.74■■□□□ 1.71
Sptbn4-204ENSMUST00000108364 Ccdc136Q3TVA9 1136 aa25.16■■□□□ 1.62
Sptbn4-204ENSMUST00000108364 Acin1Q9JIX8 1338 aaKnown RBP25.12■■□□□ 1.61
Sptbn4-204ENSMUST00000108364 Las1lA2BE28 776 aaKnown RBP24.89■■□□□ 1.58
Sptbn4-204ENSMUST00000108364 Zeb1Q64318 1117 aa24.77■■□□□ 1.56
Sptbn4-204ENSMUST00000108364 Ccdc180J3QNE4 1664 aa24.75■■□□□ 1.55
Sptbn4-204ENSMUST00000108364 Trim41Q5NCC3 630 aa24.69■■□□□ 1.54
Sptbn4-204ENSMUST00000108364 Wdr66E9Q743 1299 aa24.56■■□□□ 1.52
Sptbn4-204ENSMUST00000108364 Rtl1Q7M732 1744 aa24.53■■□□□ 1.52
Sptbn4-204ENSMUST00000108364 Gab3Q8BSM5 595 aa24.52■■□□□ 1.52
Sptbn4-204ENSMUST00000108364 Pcgf6Q99NA9 353 aa24.52■■□□□ 1.52
Sptbn4-204ENSMUST00000108364 Cngb1E1AZ71 1325 aa24.49■■□□□ 1.51
Sptbn4-204ENSMUST00000108364 HrcG5E8J6 738 aa24.35■■□□□ 1.49
Sptbn4-204ENSMUST00000108364 Abcc9P70170 1546 aa24.33■■□□□ 1.49
Sptbn4-204ENSMUST00000108364 Esf1Q3V1V3 845 aaKnown RBP24.13■■□□□ 1.45
Sptbn4-204ENSMUST00000108364 NefmP08553 848 aa24.11■■□□□ 1.45
Sptbn4-204ENSMUST00000108364 Supt5hO55201 1082 aaKnown RBP24.01■■□□□ 1.43
Sptbn4-204ENSMUST00000108364 CenpbP27790 599 aa23.86■■□□□ 1.41
Sptbn4-204ENSMUST00000108364 UbtfP25976 765 aaKnown RBP23.8■■□□□ 1.4
Sptbn4-204ENSMUST00000108364 Myt1lP97500 1187 aa23.78■■□□□ 1.4
Sptbn4-204ENSMUST00000108364 Npm2Q80W85 207 aa23.69■■□□□ 1.38
Sptbn4-204ENSMUST00000108364 Abcc8B2RUS7 1588 aa23.67■■□□□ 1.38
Sptbn4-204ENSMUST00000108364 Cdk11bP24788 784 aaKnown RBP23.61■■□□□ 1.37
Sptbn4-204ENSMUST00000108364 Pelp1Q9DBD5 1123 aaKnown RBP23.53■■□□□ 1.36
Sptbn4-204ENSMUST00000108364 Nop58Q6DFW4 536 aaKnown RBP23.44■■□□□ 1.34
Sptbn4-204ENSMUST00000108364 Neurod1Q60867 357 aa23.42■■□□□ 1.34
Sptbn4-204ENSMUST00000108364 Dcaf1Q80TR8 1506 aa23.42■■□□□ 1.34
Sptbn4-204ENSMUST00000108364 Ube2uB1AUC4 352 aa23.41■■□□□ 1.34
Sptbn4-204ENSMUST00000108364 Ppargc1bQ8VHJ7 1014 aa23.41■■□□□ 1.34
Sptbn4-204ENSMUST00000108364 Mier1Q5UAK0 511 aa23.39■■□□□ 1.33
Sptbn4-204ENSMUST00000108364 Zcchc6Q5BLK4 1491 aaKnown RBP23.35■■□□□ 1.33
Sptbn4-204ENSMUST00000108364 Myt1Q8CFC2 1127 aa23.28■■□□□ 1.32
Sptbn4-204ENSMUST00000108364 Stra8P70278 393 aa23.14■■□□□ 1.3
Sptbn4-204ENSMUST00000108364 Sall2Q9QX96 1004 aa23.1■■□□□ 1.29
Sptbn4-204ENSMUST00000108364 Slc24a1Q91WD8 1130 aa23.07■■□□□ 1.28
Sptbn4-204ENSMUST00000108364 TonslQ6NZL6 1363 aa23.03■■□□□ 1.28
Sptbn4-204ENSMUST00000108364 Gm35339A0A140LHH9 1649 aa23.03■■□□□ 1.28
Sptbn4-204ENSMUST00000108364 Tnnt3Q9QZ47 272 aa22.99■■□□□ 1.27
Sptbn4-204ENSMUST00000108364 Csrnp3P59055 597 aa22.96■■□□□ 1.27
Sptbn4-204ENSMUST00000108364 Anks4bQ8K3X6 423 aa22.94■■□□□ 1.26
Sptbn4-204ENSMUST00000108364 Cep164Q5DU05 1446 aa22.94■■□□□ 1.26
Sptbn4-204ENSMUST00000108364 ClspnQ80YR7 1315 aa22.94■■□□□ 1.26
Sptbn4-204ENSMUST00000108364 Chic1Q8CBW7 227 aa22.82■■□□□ 1.24
Sptbn4-204ENSMUST00000108364 Gm38655A0A286YDK6 273 aa22.8■■□□□ 1.24
Sptbn4-204ENSMUST00000108364 Ap3b1Q9Z1T1 1105 aa22.79■■□□□ 1.24
Sptbn4-204ENSMUST00000108364 NclP09405 707 aaKnown RBP22.77■■□□□ 1.24
Sptbn4-204ENSMUST00000108364 Amer1Q7TS75 1132 aa22.73■■□□□ 1.23
Sptbn4-204ENSMUST00000108364 Il27Q8K3I6 234 aa22.73■■□□□ 1.23
Sptbn4-204ENSMUST00000108364 Fam50aQ9WV03 339 aaKnown RBP22.72■■□□□ 1.23
Sptbn4-204ENSMUST00000108364 Aplp2Q06335 707 aa22.65■■□□□ 1.22
Sptbn4-204ENSMUST00000108364 Ttbk1Q6PCN3 1308 aa22.65■■□□□ 1.22
Sptbn4-204ENSMUST00000108364 Rb1cc1Q9ESK9 1588 aa22.65■■□□□ 1.22
Sptbn4-204ENSMUST00000108364 Plekhg3Q4VAC9 1341 aa22.63■■□□□ 1.21
Sptbn4-204ENSMUST00000108364 1700123L14RikQ3V2K7 440 aa22.61■■□□□ 1.21
Sptbn4-204ENSMUST00000108364 Eif5bQ05D44 1216 aaKnown RBP22.56■■□□□ 1.2
Sptbn4-204ENSMUST00000108364 DiexfQ8BTT6 772 aaKnown RBP22.55■■□□□ 1.2
Sptbn4-204ENSMUST00000108364 NrdcQ8BHG1 1161 aa22.47■■□□□ 1.19
Sptbn4-204ENSMUST00000108364 Mapk8ip2Q9ERE9 830 aa22.46■■□□□ 1.19
Sptbn4-204ENSMUST00000108364 Eid3Q3V124 375 aa22.45■■□□□ 1.18
Sptbn4-204ENSMUST00000108364 Aebp2Q9Z248 504 aaKnown RBP22.42■■□□□ 1.18
Sptbn4-204ENSMUST00000108364 Anp32aO35381 247 aa22.42■■□□□ 1.18
Sptbn4-204ENSMUST00000108364 Brd4Q9ESU6 1400 aaKnown RBP22.4■■□□□ 1.18
Sptbn4-204ENSMUST00000108364 Rtl5Q5DTT4 599 aa22.38■■□□□ 1.17
Sptbn4-204ENSMUST00000108364 Clip1Q922J3 1391 aa22.27■■□□□ 1.16
Sptbn4-204ENSMUST00000108364 4933416C03RikQ3V063 378 aa22.24■■□□□ 1.15
Sptbn4-204ENSMUST00000108364 Lmod2Q3UHZ5 550 aa22.21■■□□□ 1.15
Sptbn4-204ENSMUST00000108364 Baz1aO88379 1555 aa22.19■■□□□ 1.14
Sptbn4-204ENSMUST00000108364 Rsf1E9PWW9 1441 aaKnown RBP22.12■■□□□ 1.13
Sptbn4-204ENSMUST00000108364 NeflP08551 543 aa22.11■■□□□ 1.13
Sptbn4-204ENSMUST00000108364 Anp32bQ9EST5 272 aaKnown RBP22.05■■□□□ 1.12
Sptbn4-204ENSMUST00000108364 Calr4Q3TQS0 420 aa22.03■■□□□ 1.12
Sptbn4-204ENSMUST00000108364 Fam71e1A1L3C1 212 aa22.03■■□□□ 1.12
Sptbn4-204ENSMUST00000108364 Golga3P55937 1487 aa21.99■■□□□ 1.11
Sptbn4-204ENSMUST00000108364 Ppp4r2Q0VGB7 417 aa21.9■■□□□ 1.1
Sptbn4-204ENSMUST00000108364 NacadQ5SWP3 1504 aa21.89■■□□□ 1.09
Sptbn4-204ENSMUST00000108364 Hnrnpul2Q00PI9 745 aaKnown RBP21.84■■□□□ 1.09
Sptbn4-204ENSMUST00000108364 SafbD3YXK2 937 aaKnown RBP21.83■■□□□ 1.09
Sptbn4-204ENSMUST00000108364 Ccdc88bQ4QRL3 1481 aa21.79■■□□□ 1.08
Sptbn4-204ENSMUST00000108364 DaxxO35613 739 aa21.78■■□□□ 1.08
Sptbn4-204ENSMUST00000108364 Wdr43Q6ZQL4 677 aaKnown RBP21.77■■□□□ 1.08
Sptbn4-204ENSMUST00000108364 Ccer2J3QPU5 274 aa21.75■■□□□ 1.07
Sptbn4-204ENSMUST00000108364 Kdm5dQ62240 1548 aa21.73■■□□□ 1.07
Sptbn4-204ENSMUST00000108364 BlmO88700 1416 aa21.7■■□□□ 1.06
Sptbn4-204ENSMUST00000108364 Mrs2Q5NCE8 434 aa21.7■■□□□ 1.06
Sptbn4-204ENSMUST00000108364 Npm1Q61937 292 aaKnown RBP21.7■■□□□ 1.06
Sptbn4-204ENSMUST00000108364 Setd5Q5XJV7 1441 aa21.65■■□□□ 1.06
Sptbn4-204ENSMUST00000108364 Bcl11aQ9QYE3 773 aa21.62■■□□□ 1.05
Sptbn4-204ENSMUST00000108364 Zbtb4Q5F293 982 aa21.6■■□□□ 1.05
Sptbn4-204ENSMUST00000108364 Os9Q8K2C7 672 aa21.59■■□□□ 1.05
Sptbn4-204ENSMUST00000108364 Zbtb7cQ8VCZ7 619 aa21.58■■□□□ 1.04
Sptbn4-204ENSMUST00000108364 Chic2Q9D9G3 165 aa21.58■■□□□ 1.04
Sptbn4-204ENSMUST00000108364 4930567H17RikQ3V0K5 233 aa21.51■■□□□ 1.03
Sptbn4-204ENSMUST00000108364 P3h3Q8CG70 732 aa21.49■■□□□ 1.03
Sptbn4-204ENSMUST00000108364 Eea1Q8BL66 1411 aa21.49■■□□□ 1.03
Sptbn4-204ENSMUST00000108364 Cep162Q6ZQ06 1403 aa21.43■■□□□ 1.02
Sptbn4-204ENSMUST00000108364 Hsp90aa1P07901 733 aaKnown RBP21.35■■□□□ 1.01
Sptbn4-204ENSMUST00000108364 ArxO35085 564 aa21.33■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms