RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Rhox8Q6VSS7 320 aa25.63■■□□□ 1.69
Shank1-202ENSMUST00000107935 Rpgrip1Q9EPQ2 1331 aa25.17■■□□□ 1.62
Shank1-202ENSMUST00000107935 Las1lA2BE28 776 aaKnown RBP24.71■■□□□ 1.55
Shank1-202ENSMUST00000107935 Cngb1E1AZ71 1325 aa24.58■■□□□ 1.53
Shank1-202ENSMUST00000107935 Pelp1Q9DBD5 1123 aaKnown RBP24.12■■□□□ 1.45
Shank1-202ENSMUST00000107935 Ehmt2Q9Z148 1263 aaKnown RBP24.07■■□□□ 1.44
Shank1-202ENSMUST00000107935 Wdr66E9Q743 1299 aa23.72■■□□□ 1.39
Shank1-202ENSMUST00000107935 Amer1Q7TS75 1132 aa23.54■■□□□ 1.36
Shank1-202ENSMUST00000107935 CenpbP27790 599 aa23.44■■□□□ 1.34
Shank1-202ENSMUST00000107935 Zeb1Q64318 1117 aa23.43■■□□□ 1.34
Shank1-202ENSMUST00000107935 Myt1Q8CFC2 1127 aa22.94■■□□□ 1.26
Shank1-202ENSMUST00000107935 Acin1Q9JIX8 1338 aaKnown RBP22.87■■□□□ 1.25
Shank1-202ENSMUST00000107935 Ube2uB1AUC4 352 aa22.75■■□□□ 1.23
Shank1-202ENSMUST00000107935 4930567H17RikQ3V0K5 233 aa22.62■■□□□ 1.21
Shank1-202ENSMUST00000107935 Ttbk1Q6PCN3 1308 aa22.61■■□□□ 1.21
Shank1-202ENSMUST00000107935 Stra8P70278 393 aa22.54■■□□□ 1.2
Shank1-202ENSMUST00000107935 Ccdc136Q3TVA9 1136 aa22.53■■□□□ 1.2
Shank1-202ENSMUST00000107935 Gab3Q8BSM5 595 aa22.49■■□□□ 1.19
Shank1-202ENSMUST00000107935 NefmP08553 848 aa22.46■■□□□ 1.19
Shank1-202ENSMUST00000107935 4933416C03RikQ3V063 378 aa22.39■■□□□ 1.17
Shank1-202ENSMUST00000107935 Pcgf6Q99NA9 353 aa22.35■■□□□ 1.17
Shank1-202ENSMUST00000107935 Cdk11bP24788 784 aaKnown RBP22.31■■□□□ 1.16
Shank1-202ENSMUST00000107935 Esf1Q3V1V3 845 aaKnown RBP22.31■■□□□ 1.16
Shank1-202ENSMUST00000107935 Slc24a1Q91WD8 1130 aa22.27■■□□□ 1.16
Shank1-202ENSMUST00000107935 DiexfQ8BTT6 772 aaKnown RBP22.22■■□□□ 1.15
Shank1-202ENSMUST00000107935 Trim41Q5NCC3 630 aa22.18■■□□□ 1.14
Shank1-202ENSMUST00000107935 Npm2Q80W85 207 aa22.17■■□□□ 1.14
Shank1-202ENSMUST00000107935 Tnnt3Q9QZ47 272 aa22.12■■□□□ 1.13
Shank1-202ENSMUST00000107935 Myt1lP97500 1187 aa22.07■■□□□ 1.12
Shank1-202ENSMUST00000107935 UbtfP25976 765 aaKnown RBP22.01■■□□□ 1.11
Shank1-202ENSMUST00000107935 Rtl5Q5DTT4 599 aa22■■□□□ 1.11
Shank1-202ENSMUST00000107935 Nop58Q6DFW4 536 aaKnown RBP21.95■■□□□ 1.1
Shank1-202ENSMUST00000107935 HrcG5E8J6 738 aa21.8■■□□□ 1.08
Shank1-202ENSMUST00000107935 Supt5hO55201 1082 aaKnown RBP21.78■■□□□ 1.08
Shank1-202ENSMUST00000107935 Ccdc180J3QNE4 1664 aa21.74■■□□□ 1.07
Shank1-202ENSMUST00000107935 NeflP08551 543 aa21.72■■□□□ 1.07
Shank1-202ENSMUST00000107935 Eif5bQ05D44 1216 aaKnown RBP21.7■■□□□ 1.07
Shank1-202ENSMUST00000107935 NrdcQ8BHG1 1161 aa21.68■■□□□ 1.06
Shank1-202ENSMUST00000107935 Ppargc1bQ8VHJ7 1014 aa21.52■■□□□ 1.03
Shank1-202ENSMUST00000107935 Anp32aO35381 247 aa21.45■■□□□ 1.02
Shank1-202ENSMUST00000107935 Anp32bQ9EST5 272 aaKnown RBP21.44■■□□□ 1.02
Shank1-202ENSMUST00000107935 NclP09405 707 aaKnown RBP21.4■■□□□ 1.02
Shank1-202ENSMUST00000107935 Rtl1Q7M732 1744 aa21.39■■□□□ 1.01
Shank1-202ENSMUST00000107935 DaxxO35613 739 aa21.37■■□□□ 1.01
Shank1-202ENSMUST00000107935 TonslQ6NZL6 1363 aa21.29■■□□□ 1
Shank1-202ENSMUST00000107935 Neurod1Q60867 357 aa21.22■□□□□ 0.99
Shank1-202ENSMUST00000107935 Gm38655A0A286YDK6 273 aa21.13■□□□□ 0.97
Shank1-202ENSMUST00000107935 Csrnp3P59055 597 aa21.12■□□□□ 0.97
Shank1-202ENSMUST00000107935 Fam50aQ9WV03 339 aaKnown RBP21.1■□□□□ 0.97
Shank1-202ENSMUST00000107935 ClspnQ80YR7 1315 aa21.06■□□□□ 0.96
Shank1-202ENSMUST00000107935 Aplp2Q06335 707 aa21.04■□□□□ 0.96
Shank1-202ENSMUST00000107935 NischQ80TM9 1593 aa21.04■□□□□ 0.96
Shank1-202ENSMUST00000107935 Mier1Q5UAK0 511 aa21.02■□□□□ 0.96
Shank1-202ENSMUST00000107935 Anks4bQ8K3X6 423 aa21.02■□□□□ 0.96
Shank1-202ENSMUST00000107935 Ythdc1E9Q5K9 736 aaKnown RBP20.99■□□□□ 0.95
Shank1-202ENSMUST00000107935 Ap3b1Q9Z1T1 1105 aa20.94■□□□□ 0.94
Shank1-202ENSMUST00000107935 Os9Q8K2C7 672 aa20.87■□□□□ 0.93
Shank1-202ENSMUST00000107935 CatipB9EKE5 520 aa20.78■□□□□ 0.92
Shank1-202ENSMUST00000107935 Hsp90aa1P07901 733 aaKnown RBP20.74■□□□□ 0.91
Shank1-202ENSMUST00000107935 Ccdc9Q8VC31 543 aaKnown RBP20.72■□□□□ 0.91
Shank1-202ENSMUST00000107935 ArxO35085 564 aa20.71■□□□□ 0.91
Shank1-202ENSMUST00000107935 Il27Q8K3I6 234 aa20.66■□□□□ 0.9
Shank1-202ENSMUST00000107935 Sall2Q9QX96 1004 aa20.66■□□□□ 0.9
Shank1-202ENSMUST00000107935 Ppp4r2Q0VGB7 417 aa20.64■□□□□ 0.9
Shank1-202ENSMUST00000107935 Lmod3E9QA62 571 aa20.63■□□□□ 0.89
Shank1-202ENSMUST00000107935 Upf2A2AT37 1269 aaKnown RBP20.61■□□□□ 0.89
Shank1-202ENSMUST00000107935 Calr4Q3TQS0 420 aa20.61■□□□□ 0.89
Shank1-202ENSMUST00000107935 Mapk8ip2Q9ERE9 830 aa20.54■□□□□ 0.88
Shank1-202ENSMUST00000107935 Bcl11aQ9QYE3 773 aa20.51■□□□□ 0.87
Shank1-202ENSMUST00000107935 1700123L14RikQ3V2K7 440 aa20.45■□□□□ 0.86
Shank1-202ENSMUST00000107935 Wdr43Q6ZQL4 677 aaKnown RBP20.44■□□□□ 0.86
Shank1-202ENSMUST00000107935 Nlrp6Q91WS2 869 aa20.43■□□□□ 0.86
Shank1-202ENSMUST00000107935 Polr3glQ8R0C0 218 aa20.43■□□□□ 0.86
Shank1-202ENSMUST00000107935 Fam71e1A1L3C1 212 aa20.42■□□□□ 0.86
Shank1-202ENSMUST00000107935 Trim44Q9QXA7 346 aa20.35■□□□□ 0.85
Shank1-202ENSMUST00000107935 DekQ7TNV0 380 aaKnown RBP20.31■□□□□ 0.84
Shank1-202ENSMUST00000107935 Plekhg3Q4VAC9 1341 aa20.28■□□□□ 0.84
Shank1-202ENSMUST00000107935 Dcaf1Q80TR8 1506 aa20.25■□□□□ 0.83
Shank1-202ENSMUST00000107935 Zbtb4Q5F293 982 aa20.23■□□□□ 0.83
Shank1-202ENSMUST00000107935 Ccdc27Q3V036 639 aa20.22■□□□□ 0.83
Shank1-202ENSMUST00000107935 Vsig10D3YX43 558 aa20.22■□□□□ 0.83
Shank1-202ENSMUST00000107935 Zbtb7cQ8VCZ7 619 aa20.18■□□□□ 0.82
Shank1-202ENSMUST00000107935 Zcchc6Q5BLK4 1491 aaKnown RBP20.18■□□□□ 0.82
Shank1-202ENSMUST00000107935 Lmod2Q3UHZ5 550 aa20.16■□□□□ 0.82
Shank1-202ENSMUST00000107935 Chic1Q8CBW7 227 aa20.16■□□□□ 0.82
Shank1-202ENSMUST00000107935 CanxP35564 591 aaKnown RBP20.15■□□□□ 0.82
Shank1-202ENSMUST00000107935 Eid3Q3V124 375 aa20.15■□□□□ 0.82
Shank1-202ENSMUST00000107935 Irx3P81067 507 aa20.09■□□□□ 0.81
Shank1-202ENSMUST00000107935 Gm35339A0A140LHH9 1649 aa20.08■□□□□ 0.8
Shank1-202ENSMUST00000107935 Hsp90ab1P11499 724 aaKnown RBP20.07■□□□□ 0.8
Shank1-202ENSMUST00000107935 Prdm10Q3UTQ7 1184 aa20.07■□□□□ 0.8
Shank1-202ENSMUST00000107935 PtmaP26350 111 aa20.05■□□□□ 0.8
Shank1-202ENSMUST00000107935 Rad21Q61550 635 aaKnown RBP20.04■□□□□ 0.8
Shank1-202ENSMUST00000107935 Abcc9P70170 1546 aa20.04■□□□□ 0.8
Shank1-202ENSMUST00000107935 Hnrnpul2Q00PI9 745 aaKnown RBP20.03■□□□□ 0.8
Shank1-202ENSMUST00000107935 Tnnt2P50752 301 aa20.01■□□□□ 0.79
Shank1-202ENSMUST00000107935 Rangap1P46061 589 aaKnown RBP19.96■□□□□ 0.79
Shank1-202ENSMUST00000107935 Mrs2Q5NCE8 434 aa19.95■□□□□ 0.78
Shank1-202ENSMUST00000107935 Htatsf1Q8BGC0 757 aa19.95■□□□□ 0.78
Shank1-202ENSMUST00000107935 Ifnlr1Q8CGK5 535 aa19.93■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms