RNA–Protein interactions for RNA: ENSMUST00000100348.9

Cacna1b-203, Transcript of Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cacna1b, Length 7,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1b-203ENSMUST00000100348 Rhox8Q6VSS7 320 aa23.32■■□□□ 1.32
Cacna1b-203ENSMUST00000100348 NischQ80TM9 1593 aa21.72■■□□□ 1.07
Cacna1b-203ENSMUST00000100348 Ehmt2Q9Z148 1263 aaKnown RBP21.53■■□□□ 1.04
Cacna1b-203ENSMUST00000100348 Ccdc136Q3TVA9 1136 aa21.19■□□□□ 0.98
Cacna1b-203ENSMUST00000100348 Rpgrip1Q9EPQ2 1331 aa21.1■□□□□ 0.97
Cacna1b-203ENSMUST00000100348 Cngb1E1AZ71 1325 aa20.73■□□□□ 0.91
Cacna1b-203ENSMUST00000100348 Gab3Q8BSM5 595 aa20.55■□□□□ 0.88
Cacna1b-203ENSMUST00000100348 Esf1Q3V1V3 845 aaKnown RBP20.51■□□□□ 0.87
Cacna1b-203ENSMUST00000100348 Abcc9P70170 1546 aa20.36■□□□□ 0.85
Cacna1b-203ENSMUST00000100348 Trim41Q5NCC3 630 aa20.34■□□□□ 0.85
Cacna1b-203ENSMUST00000100348 Ccdc180J3QNE4 1664 aa20.25■□□□□ 0.83
Cacna1b-203ENSMUST00000100348 Rtl1Q7M732 1744 aa20.24■□□□□ 0.83
Cacna1b-203ENSMUST00000100348 Zeb1Q64318 1117 aa20.24■□□□□ 0.83
Cacna1b-203ENSMUST00000100348 Las1lA2BE28 776 aaKnown RBP20.23■□□□□ 0.83
Cacna1b-203ENSMUST00000100348 Wdr66E9Q743 1299 aa20.1■□□□□ 0.81
Cacna1b-203ENSMUST00000100348 Myt1lP97500 1187 aa20.04■□□□□ 0.8
Cacna1b-203ENSMUST00000100348 Gm35339A0A140LHH9 1649 aa20.01■□□□□ 0.79
Cacna1b-203ENSMUST00000100348 Npm2Q80W85 207 aa19.97■□□□□ 0.79
Cacna1b-203ENSMUST00000100348 Acin1Q9JIX8 1338 aaKnown RBP19.96■□□□□ 0.79
Cacna1b-203ENSMUST00000100348 Abcc8B2RUS7 1588 aa19.93■□□□□ 0.78
Cacna1b-203ENSMUST00000100348 Pcgf6Q99NA9 353 aa19.89■□□□□ 0.78
Cacna1b-203ENSMUST00000100348 Zcchc6Q5BLK4 1491 aaKnown RBP19.76■□□□□ 0.75
Cacna1b-203ENSMUST00000100348 UbtfP25976 765 aaKnown RBP19.75■□□□□ 0.75
Cacna1b-203ENSMUST00000100348 Ube2uB1AUC4 352 aa19.72■□□□□ 0.75
Cacna1b-203ENSMUST00000100348 HrcG5E8J6 738 aa19.56■□□□□ 0.72
Cacna1b-203ENSMUST00000100348 Il27Q8K3I6 234 aa19.47■□□□□ 0.71
Cacna1b-203ENSMUST00000100348 CenpbP27790 599 aa19.4■□□□□ 0.7
Cacna1b-203ENSMUST00000100348 Ap3b1Q9Z1T1 1105 aa19.38■□□□□ 0.69
Cacna1b-203ENSMUST00000100348 Supt5hO55201 1082 aaKnown RBP19.38■□□□□ 0.69
Cacna1b-203ENSMUST00000100348 Ppargc1bQ8VHJ7 1014 aa19.37■□□□□ 0.69
Cacna1b-203ENSMUST00000100348 NefmP08553 848 aa19.24■□□□□ 0.67
Cacna1b-203ENSMUST00000100348 Rb1cc1Q9ESK9 1588 aa19.21■□□□□ 0.67
Cacna1b-203ENSMUST00000100348 Myt1Q8CFC2 1127 aa19.14■□□□□ 0.65
Cacna1b-203ENSMUST00000100348 DiexfQ8BTT6 772 aaKnown RBP19.14■□□□□ 0.65
Cacna1b-203ENSMUST00000100348 Neurod1Q60867 357 aa19.13■□□□□ 0.65
Cacna1b-203ENSMUST00000100348 Slc24a1Q91WD8 1130 aa19.12■□□□□ 0.65
Cacna1b-203ENSMUST00000100348 Mier1Q5UAK0 511 aa19.07■□□□□ 0.64
Cacna1b-203ENSMUST00000100348 Fam50aQ9WV03 339 aaKnown RBP18.97■□□□□ 0.63
Cacna1b-203ENSMUST00000100348 Chic1Q8CBW7 227 aa18.95■□□□□ 0.62
Cacna1b-203ENSMUST00000100348 Dcaf1Q80TR8 1506 aa18.94■□□□□ 0.62
Cacna1b-203ENSMUST00000100348 Pelp1Q9DBD5 1123 aaKnown RBP18.91■□□□□ 0.62
Cacna1b-203ENSMUST00000100348 Plekhg3Q4VAC9 1341 aa18.87■□□□□ 0.61
Cacna1b-203ENSMUST00000100348 Csrnp3P59055 597 aa18.83■□□□□ 0.6
Cacna1b-203ENSMUST00000100348 Cdk11bP24788 784 aaKnown RBP18.82■□□□□ 0.6
Cacna1b-203ENSMUST00000100348 Amer1Q7TS75 1132 aa18.82■□□□□ 0.6
Cacna1b-203ENSMUST00000100348 Gm38655A0A286YDK6 273 aa18.79■□□□□ 0.6
Cacna1b-203ENSMUST00000100348 Ttbk1Q6PCN3 1308 aa18.76■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 TonslQ6NZL6 1363 aa18.74■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 NclP09405 707 aaKnown RBP18.73■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 Lmod2Q3UHZ5 550 aa18.72■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 Nop58Q6DFW4 536 aaKnown RBP18.71■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 Brd4Q9ESU6 1400 aaKnown RBP18.63■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 Mapk8ip2Q9ERE9 830 aa18.61■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 Cep164Q5DU05 1446 aa18.61■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 1700123L14RikQ3V2K7 440 aa18.61■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 Baz1aO88379 1555 aa18.6■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 Eif5bQ05D44 1216 aaKnown RBP18.58■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 NacadQ5SWP3 1504 aa18.57■□□□□ 0.56
Cacna1b-203ENSMUST00000100348 Kdm5dQ62240 1548 aa18.55■□□□□ 0.56
Cacna1b-203ENSMUST00000100348 Eid3Q3V124 375 aa18.52■□□□□ 0.56
Cacna1b-203ENSMUST00000100348 Zbtb7cQ8VCZ7 619 aa18.52■□□□□ 0.56
Cacna1b-203ENSMUST00000100348 Npm1Q61937 292 aaKnown RBP18.48■□□□□ 0.55
Cacna1b-203ENSMUST00000100348 Stra8P70278 393 aa18.48■□□□□ 0.55
Cacna1b-203ENSMUST00000100348 Anks4bQ8K3X6 423 aa18.48■□□□□ 0.55
Cacna1b-203ENSMUST00000100348 Sall2Q9QX96 1004 aa18.45■□□□□ 0.54
Cacna1b-203ENSMUST00000100348 Clip1Q922J3 1391 aa18.39■□□□□ 0.53
Cacna1b-203ENSMUST00000100348 Aplp2Q06335 707 aa18.34■□□□□ 0.53
Cacna1b-203ENSMUST00000100348 ClspnQ80YR7 1315 aa18.32■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 Zbtb4Q5F293 982 aa18.31■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 NrdcQ8BHG1 1161 aa18.31■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 Bcl11aQ9QYE3 773 aa18.3■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 Ifnlr1Q8CGK5 535 aa18.27■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 Os9Q8K2C7 672 aa18.26■□□□□ 0.51
Cacna1b-203ENSMUST00000100348 Rsf1E9PWW9 1441 aaKnown RBP18.23■□□□□ 0.51
Cacna1b-203ENSMUST00000100348 Tnnt3Q9QZ47 272 aa18.2■□□□□ 0.5
Cacna1b-203ENSMUST00000100348 Ubl4bQ9CQ84 188 aa18.18■□□□□ 0.5
Cacna1b-203ENSMUST00000100348 Fkbp15Q6P9Q6 1216 aaKnown RBP18.18■□□□□ 0.5
Cacna1b-203ENSMUST00000100348 Golga3P55937 1487 aa18.17■□□□□ 0.5
Cacna1b-203ENSMUST00000100348 Hnrnpul2Q00PI9 745 aaKnown RBP18.12■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 ScribQ80U72 1612 aa18.12■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 Chic2Q9D9G3 165 aa18.11■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 4933416C03RikQ3V063 378 aa18.1■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 Aebp2Q9Z248 504 aaKnown RBP18.1■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 Fam71e1A1L3C1 212 aa18.06■□□□□ 0.48
Cacna1b-203ENSMUST00000100348 Ccdc88bQ4QRL3 1481 aa18.04■□□□□ 0.48
Cacna1b-203ENSMUST00000100348 BlmO88700 1416 aa18.03■□□□□ 0.48
Cacna1b-203ENSMUST00000100348 Prdm10Q3UTQ7 1184 aa18.01■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 Erich6D3Z6S9 713 aa18■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 Rtl5Q5DTT4 599 aa18■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 Anp32aO35381 247 aa17.99■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 Anp32bQ9EST5 272 aaKnown RBP17.97■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 NeflP08551 543 aa17.94■□□□□ 0.46
Cacna1b-203ENSMUST00000100348 Kif15Q6P9L6 1387 aa17.93■□□□□ 0.46
Cacna1b-203ENSMUST00000100348 Setd5Q5XJV7 1441 aa17.93■□□□□ 0.46
Cacna1b-203ENSMUST00000100348 Cecr2E9Q2Z1 1453 aa17.9■□□□□ 0.46
Cacna1b-203ENSMUST00000100348 Sycp2Q9CUU3 1500 aa17.87■□□□□ 0.45
Cacna1b-203ENSMUST00000100348 Synj1Q8CHC4 1574 aa17.83■□□□□ 0.45
Cacna1b-203ENSMUST00000100348 Smarca2Q6DIC0 1577 aa17.79■□□□□ 0.44
Cacna1b-203ENSMUST00000100348 Atp1b4Q99ME6 356 aa17.74■□□□□ 0.43
Cacna1b-203ENSMUST00000100348 PrkcshO08795 521 aa17.74■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms