RNA–Protein interactions for RNA: ENSMUST00000099241.3

Ccl28-201, Transcript of C-C motif chemokine 28, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccl28, Length 3,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28-201ENSMUST00000099241 NischQ80TM9 1593 aa10.31□□□□□ -0.76
Ccl28-201ENSMUST00000099241 Rpgrip1Q9EPQ2 1331 aa10.17□□□□□ -0.78
Ccl28-201ENSMUST00000099241 Rhox8Q6VSS7 320 aa10.07□□□□□ -0.8
Ccl28-201ENSMUST00000099241 Rtl1Q7M732 1744 aa10.04□□□□□ -0.8
Ccl28-201ENSMUST00000099241 Abcc9P70170 1546 aa9.99□□□□□ -0.81
Ccl28-201ENSMUST00000099241 Ccdc180J3QNE4 1664 aa9.93□□□□□ -0.82
Ccl28-201ENSMUST00000099241 Gm35339A0A140LHH9 1649 aa9.88□□□□□ -0.83
Ccl28-201ENSMUST00000099241 Acin1Q9JIX8 1338 aaKnown RBP9.71□□□□□ -0.85
Ccl28-201ENSMUST00000099241 Abcc8B2RUS7 1588 aa9.67□□□□□ -0.86
Ccl28-201ENSMUST00000099241 HrcG5E8J6 738 aa9.52□□□□□ -0.89
Ccl28-201ENSMUST00000099241 Mapk8ip2Q9ERE9 830 aa9.49□□□□□ -0.89
Ccl28-201ENSMUST00000099241 Pcgf6Q99NA9 353 aa9.44□□□□□ -0.9
Ccl28-201ENSMUST00000099241 Dcaf1Q80TR8 1506 aa9.43□□□□□ -0.9
Ccl28-201ENSMUST00000099241 Zcchc6Q5BLK4 1491 aaKnown RBP9.43□□□□□ -0.9
Ccl28-201ENSMUST00000099241 Ehmt2Q9Z148 1263 aaKnown RBP9.41□□□□□ -0.9
Ccl28-201ENSMUST00000099241 Chic1Q8CBW7 227 aa9.33□□□□□ -0.92
Ccl28-201ENSMUST00000099241 Las1lA2BE28 776 aaKnown RBP9.25□□□□□ -0.93
Ccl28-201ENSMUST00000099241 Ccdc136Q3TVA9 1136 aa9.23□□□□□ -0.93
Ccl28-201ENSMUST00000099241 Trim41Q5NCC3 630 aa9.21□□□□□ -0.93
Ccl28-201ENSMUST00000099241 Supt5hO55201 1082 aaKnown RBP9.16□□□□□ -0.94
Ccl28-201ENSMUST00000099241 NefmP08553 848 aa9.11□□□□□ -0.95
Ccl28-201ENSMUST00000099241 Cngb1E1AZ71 1325 aa9.08□□□□□ -0.96
Ccl28-201ENSMUST00000099241 Cep164Q5DU05 1446 aa9.06□□□□□ -0.96
Ccl28-201ENSMUST00000099241 Rb1cc1Q9ESK9 1588 aa9.05□□□□□ -0.96
Ccl28-201ENSMUST00000099241 Neurod1Q60867 357 aa9.05□□□□□ -0.96
Ccl28-201ENSMUST00000099241 Zeb1Q64318 1117 aa9.02□□□□□ -0.97
Ccl28-201ENSMUST00000099241 Baz1aO88379 1555 aa8.97□□□□□ -0.97
Ccl28-201ENSMUST00000099241 Myt1Q8CFC2 1127 aa8.97□□□□□ -0.97
Ccl28-201ENSMUST00000099241 Anks4bQ8K3X6 423 aa8.92□□□□□ -0.98
Ccl28-201ENSMUST00000099241 Mier1Q5UAK0 511 aa8.88□□□□□ -0.99
Ccl28-201ENSMUST00000099241 Gab3Q8BSM5 595 aa8.87□□□□□ -0.99
Ccl28-201ENSMUST00000099241 Sall2Q9QX96 1004 aa8.85□□□□□ -0.99
Ccl28-201ENSMUST00000099241 CenpbP27790 599 aa8.85□□□□□ -0.99
Ccl28-201ENSMUST00000099241 Wdr66E9Q743 1299 aa8.82□□□□□ -1
Ccl28-201ENSMUST00000099241 Cdk11bP24788 784 aaKnown RBP8.82□□□□□ -1
Ccl28-201ENSMUST00000099241 1700123L14RikQ3V2K7 440 aa8.8□□□□□ -1
Ccl28-201ENSMUST00000099241 Crybg2B7ZCC2 1516 aa8.79□□□□□ -1
Ccl28-201ENSMUST00000099241 Aplp2Q06335 707 aa8.79□□□□□ -1
Ccl28-201ENSMUST00000099241 ScribQ80U72 1612 aa8.77□□□□□ -1
Ccl28-201ENSMUST00000099241 Kdm5dQ62240 1548 aa8.77□□□□□ -1.01
Ccl28-201ENSMUST00000099241 Nop58Q6DFW4 536 aaKnown RBP8.77□□□□□ -1.01
Ccl28-201ENSMUST00000099241 Csrnp3P59055 597 aa8.76□□□□□ -1.01
Ccl28-201ENSMUST00000099241 NacadQ5SWP3 1504 aa8.75□□□□□ -1.01
Ccl28-201ENSMUST00000099241 Smarca2Q6DIC0 1577 aa8.75□□□□□ -1.01
Ccl28-201ENSMUST00000099241 ClspnQ80YR7 1315 aa8.74□□□□□ -1.01
Ccl28-201ENSMUST00000099241 Rsf1E9PWW9 1441 aaKnown RBP8.74□□□□□ -1.01
Ccl28-201ENSMUST00000099241 Brd4Q9ESU6 1400 aaKnown RBP8.73□□□□□ -1.01
Ccl28-201ENSMUST00000099241 UbtfP25976 765 aaKnown RBP8.69□□□□□ -1.02
Ccl28-201ENSMUST00000099241 Esf1Q3V1V3 845 aaKnown RBP8.69□□□□□ -1.02
Ccl28-201ENSMUST00000099241 Golga3P55937 1487 aa8.67□□□□□ -1.02
Ccl28-201ENSMUST00000099241 TonslQ6NZL6 1363 aa8.63□□□□□ -1.03
Ccl28-201ENSMUST00000099241 Tnnt3Q9QZ47 272 aa8.62□□□□□ -1.03
Ccl28-201ENSMUST00000099241 Aebp2Q9Z248 504 aaKnown RBP8.62□□□□□ -1.03
Ccl28-201ENSMUST00000099241 Ccdc88bQ4QRL3 1481 aa8.62□□□□□ -1.03
Ccl28-201ENSMUST00000099241 Myt1lP97500 1187 aa8.52□□□□□ -1.05
Ccl28-201ENSMUST00000099241 Stra8P70278 393 aa8.52□□□□□ -1.05
Ccl28-201ENSMUST00000099241 Sycp2Q9CUU3 1500 aa8.5□□□□□ -1.05
Ccl28-201ENSMUST00000099241 DiexfQ8BTT6 772 aaKnown RBP8.5□□□□□ -1.05
Ccl28-201ENSMUST00000099241 Ppargc1bQ8VHJ7 1014 aa8.5□□□□□ -1.05
Ccl28-201ENSMUST00000099241 Npm2Q80W85 207 aa8.48□□□□□ -1.05
Ccl28-201ENSMUST00000099241 Pelp1Q9DBD5 1123 aaKnown RBP8.48□□□□□ -1.05
Ccl28-201ENSMUST00000099241 Rapgef2Q8CHG7 1496 aa8.46□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Rtl5Q5DTT4 599 aa8.46□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Synj1Q8CHC4 1574 aa8.45□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Il27Q8K3I6 234 aa8.45□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Cecr2E9Q2Z1 1453 aa8.44□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Gm38655A0A286YDK6 273 aa8.44□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Clip1Q922J3 1391 aa8.43□□□□□ -1.06
Ccl28-201ENSMUST00000099241 CftrP26361 1476 aa8.42□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Cep162Q6ZQ06 1403 aa8.42□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Anp32aO35381 247 aa8.42□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Top2bQ64511 1612 aa8.4□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Fam71e1A1L3C1 212 aa8.4□□□□□ -1.06
Ccl28-201ENSMUST00000099241 Fmn1Q05860 1466 aa8.39□□□□□ -1.07
Ccl28-201ENSMUST00000099241 Plekhg3Q4VAC9 1341 aa8.38□□□□□ -1.07
Ccl28-201ENSMUST00000099241 Hnrnpul2Q00PI9 745 aaKnown RBP8.36□□□□□ -1.07
Ccl28-201ENSMUST00000099241 Bcl11aQ9QYE3 773 aa8.35□□□□□ -1.07
Ccl28-201ENSMUST00000099241 Cttnbp2B9EJA2 1648 aa8.35□□□□□ -1.07
Ccl28-201ENSMUST00000099241 Ncapd3Q6ZQK0 1506 aa8.33□□□□□ -1.08
Ccl28-201ENSMUST00000099241 Top2aQ01320 1528 aaKnown RBP8.32□□□□□ -1.08
Ccl28-201ENSMUST00000099241 SafbD3YXK2 937 aaKnown RBP8.3□□□□□ -1.08
Ccl28-201ENSMUST00000099241 NclP09405 707 aaKnown RBP8.3□□□□□ -1.08
Ccl28-201ENSMUST00000099241 Cc2d2aQ8CFW7 1633 aa8.29□□□□□ -1.08
Ccl28-201ENSMUST00000099241 Eid3Q3V124 375 aa8.29□□□□□ -1.08
Ccl28-201ENSMUST00000099241 Eea1Q8BL66 1411 aa8.28□□□□□ -1.08
Ccl28-201ENSMUST00000099241 Ap3b1Q9Z1T1 1105 aa8.28□□□□□ -1.08
Ccl28-201ENSMUST00000099241 Calr4Q3TQS0 420 aa8.27□□□□□ -1.09
Ccl28-201ENSMUST00000099241 Ccer2J3QPU5 274 aa8.26□□□□□ -1.09
Ccl28-201ENSMUST00000099241 Ubl4bQ9CQ84 188 aa8.26□□□□□ -1.09
Ccl28-201ENSMUST00000099241 Ccdc18Q640L5 1455 aa8.25□□□□□ -1.09
Ccl28-201ENSMUST00000099241 Phf23Q8BSN5 401 aa8.24□□□□□ -1.09
Ccl28-201ENSMUST00000099241 Znf710Q3U288 666 aa8.23□□□□□ -1.09
Ccl28-201ENSMUST00000099241 Baz1bQ9Z277 1479 aa8.22□□□□□ -1.09
Ccl28-201ENSMUST00000099241 Smarca4Q3TKT4 1613 aaKnown RBP8.22□□□□□ -1.09
Ccl28-201ENSMUST00000099241 Setd5Q5XJV7 1441 aa8.22□□□□□ -1.09
Ccl28-201ENSMUST00000099241 Gm13697A2AK42 830 aa8.21□□□□□ -1.1
Ccl28-201ENSMUST00000099241 Dnajc5bQ9CQ94 199 aa8.2□□□□□ -1.1
Ccl28-201ENSMUST00000099241 Fam50aQ9WV03 339 aaKnown RBP8.2□□□□□ -1.1
Ccl28-201ENSMUST00000099241 BicraF8VPZ9 1578 aa8.17□□□□□ -1.1
Ccl28-201ENSMUST00000099241 Npm1Q61937 292 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 70.8 ms