RNA–Protein interactions for RNA: ENSMUST00000089912.11

Casc4-202, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-202ENSMUST00000089912 Rhox8Q6VSS7 320 aa23.61■■□□□ 1.37
Casc4-202ENSMUST00000089912 NischQ80TM9 1593 aa23■■□□□ 1.27
Casc4-202ENSMUST00000089912 Ehmt2Q9Z148 1263 aaKnown RBP22.66■■□□□ 1.22
Casc4-202ENSMUST00000089912 Rpgrip1Q9EPQ2 1331 aa21.98■■□□□ 1.11
Casc4-202ENSMUST00000089912 Abcc9P70170 1546 aa21.98■■□□□ 1.11
Casc4-202ENSMUST00000089912 Ccdc136Q3TVA9 1136 aa21.77■■□□□ 1.08
Casc4-202ENSMUST00000089912 Acin1Q9JIX8 1338 aaKnown RBP21.63■■□□□ 1.05
Casc4-202ENSMUST00000089912 Ccdc180J3QNE4 1664 aa21.51■■□□□ 1.03
Casc4-202ENSMUST00000089912 Abcc8B2RUS7 1588 aa21.43■■□□□ 1.02
Casc4-202ENSMUST00000089912 Pcgf6Q99NA9 353 aa21.37■■□□□ 1.01
Casc4-202ENSMUST00000089912 Rtl1Q7M732 1744 aa21.34■■□□□ 1.01
Casc4-202ENSMUST00000089912 Gm35339A0A140LHH9 1649 aa21.24■□□□□ 0.99
Casc4-202ENSMUST00000089912 Trim41Q5NCC3 630 aa21.16■□□□□ 0.98
Casc4-202ENSMUST00000089912 Zeb1Q64318 1117 aa21.11■□□□□ 0.97
Casc4-202ENSMUST00000089912 Supt5hO55201 1082 aaKnown RBP21.05■□□□□ 0.96
Casc4-202ENSMUST00000089912 Gab3Q8BSM5 595 aa21.03■□□□□ 0.96
Casc4-202ENSMUST00000089912 HrcG5E8J6 738 aa20.88■□□□□ 0.93
Casc4-202ENSMUST00000089912 Cngb1E1AZ71 1325 aa20.78■□□□□ 0.92
Casc4-202ENSMUST00000089912 Zcchc6Q5BLK4 1491 aaKnown RBP20.78■□□□□ 0.92
Casc4-202ENSMUST00000089912 Neurod1Q60867 357 aa20.63■□□□□ 0.89
Casc4-202ENSMUST00000089912 Ppargc1bQ8VHJ7 1014 aa20.58■□□□□ 0.89
Casc4-202ENSMUST00000089912 Dcaf1Q80TR8 1506 aa20.54■□□□□ 0.88
Casc4-202ENSMUST00000089912 Wdr66E9Q743 1299 aa20.53■□□□□ 0.88
Casc4-202ENSMUST00000089912 Mier1Q5UAK0 511 aa20.32■□□□□ 0.84
Casc4-202ENSMUST00000089912 UbtfP25976 765 aaKnown RBP20.31■□□□□ 0.84
Casc4-202ENSMUST00000089912 Chic1Q8CBW7 227 aa20.29■□□□□ 0.84
Casc4-202ENSMUST00000089912 Sall2Q9QX96 1004 aa20.28■□□□□ 0.84
Casc4-202ENSMUST00000089912 Las1lA2BE28 776 aaKnown RBP20.27■□□□□ 0.84
Casc4-202ENSMUST00000089912 Esf1Q3V1V3 845 aaKnown RBP20.22■□□□□ 0.83
Casc4-202ENSMUST00000089912 Rb1cc1Q9ESK9 1588 aa20.22■□□□□ 0.83
Casc4-202ENSMUST00000089912 Myt1lP97500 1187 aa20.15■□□□□ 0.82
Casc4-202ENSMUST00000089912 Gm38655A0A286YDK6 273 aa20.14■□□□□ 0.81
Casc4-202ENSMUST00000089912 NefmP08553 848 aa20.13■□□□□ 0.81
Casc4-202ENSMUST00000089912 Csrnp3P59055 597 aa20.1■□□□□ 0.81
Casc4-202ENSMUST00000089912 Cep164Q5DU05 1446 aa20.02■□□□□ 0.8
Casc4-202ENSMUST00000089912 1700123L14RikQ3V2K7 440 aa19.98■□□□□ 0.79
Casc4-202ENSMUST00000089912 Aebp2Q9Z248 504 aaKnown RBP19.91■□□□□ 0.78
Casc4-202ENSMUST00000089912 Cdk11bP24788 784 aaKnown RBP19.85■□□□□ 0.77
Casc4-202ENSMUST00000089912 Nop58Q6DFW4 536 aaKnown RBP19.85■□□□□ 0.77
Casc4-202ENSMUST00000089912 Rsf1E9PWW9 1441 aaKnown RBP19.83■□□□□ 0.76
Casc4-202ENSMUST00000089912 Baz1aO88379 1555 aa19.77■□□□□ 0.76
Casc4-202ENSMUST00000089912 Npm2Q80W85 207 aa19.77■□□□□ 0.75
Casc4-202ENSMUST00000089912 Anks4bQ8K3X6 423 aa19.75■□□□□ 0.75
Casc4-202ENSMUST00000089912 Kdm5dQ62240 1548 aa19.67■□□□□ 0.74
Casc4-202ENSMUST00000089912 ScribQ80U72 1612 aa19.67■□□□□ 0.74
Casc4-202ENSMUST00000089912 Mapk8ip2Q9ERE9 830 aa19.66■□□□□ 0.74
Casc4-202ENSMUST00000089912 Plekhg3Q4VAC9 1341 aa19.64■□□□□ 0.74
Casc4-202ENSMUST00000089912 CenpbP27790 599 aa19.64■□□□□ 0.73
Casc4-202ENSMUST00000089912 Ccdc88bQ4QRL3 1481 aa19.63■□□□□ 0.73
Casc4-202ENSMUST00000089912 Ap3b1Q9Z1T1 1105 aa19.58■□□□□ 0.73
Casc4-202ENSMUST00000089912 Eid3Q3V124 375 aa19.57■□□□□ 0.72
Casc4-202ENSMUST00000089912 TonslQ6NZL6 1363 aa19.53■□□□□ 0.72
Casc4-202ENSMUST00000089912 ClspnQ80YR7 1315 aa19.53■□□□□ 0.72
Casc4-202ENSMUST00000089912 Slc24a1Q91WD8 1130 aa19.39■□□□□ 0.7
Casc4-202ENSMUST00000089912 Aplp2Q06335 707 aa19.36■□□□□ 0.69
Casc4-202ENSMUST00000089912 Il27Q8K3I6 234 aa19.36■□□□□ 0.69
Casc4-202ENSMUST00000089912 NacadQ5SWP3 1504 aa19.35■□□□□ 0.69
Casc4-202ENSMUST00000089912 Brd4Q9ESU6 1400 aaKnown RBP19.33■□□□□ 0.69
Casc4-202ENSMUST00000089912 SafbD3YXK2 937 aaKnown RBP19.32■□□□□ 0.68
Casc4-202ENSMUST00000089912 Golga3P55937 1487 aa19.29■□□□□ 0.68
Casc4-202ENSMUST00000089912 Cecr2E9Q2Z1 1453 aa19.26■□□□□ 0.67
Casc4-202ENSMUST00000089912 Smarca2Q6DIC0 1577 aa19.24■□□□□ 0.67
Casc4-202ENSMUST00000089912 Fam50aQ9WV03 339 aaKnown RBP19.2■□□□□ 0.66
Casc4-202ENSMUST00000089912 Ube2uB1AUC4 352 aa19.2■□□□□ 0.66
Casc4-202ENSMUST00000089912 Hnrnpul2Q00PI9 745 aaKnown RBP19.19■□□□□ 0.66
Casc4-202ENSMUST00000089912 Clip1Q922J3 1391 aa19.14■□□□□ 0.65
Casc4-202ENSMUST00000089912 Fam71e1A1L3C1 212 aa19.14■□□□□ 0.65
Casc4-202ENSMUST00000089912 NclP09405 707 aaKnown RBP19.12■□□□□ 0.65
Casc4-202ENSMUST00000089912 Myt1Q8CFC2 1127 aa19.12■□□□□ 0.65
Casc4-202ENSMUST00000089912 DiexfQ8BTT6 772 aaKnown RBP19.09■□□□□ 0.65
Casc4-202ENSMUST00000089912 Lmod2Q3UHZ5 550 aa19.07■□□□□ 0.64
Casc4-202ENSMUST00000089912 Synj1Q8CHC4 1574 aa19■□□□□ 0.63
Casc4-202ENSMUST00000089912 Eif5bQ05D44 1216 aaKnown RBP19■□□□□ 0.63
Casc4-202ENSMUST00000089912 Ttbk1Q6PCN3 1308 aa18.95■□□□□ 0.62
Casc4-202ENSMUST00000089912 Tnnt3Q9QZ47 272 aa18.87■□□□□ 0.61
Casc4-202ENSMUST00000089912 Cep162Q6ZQ06 1403 aa18.86■□□□□ 0.61
Casc4-202ENSMUST00000089912 Rapgef2Q8CHG7 1496 aa18.86■□□□□ 0.61
Casc4-202ENSMUST00000089912 Sycp2Q9CUU3 1500 aa18.86■□□□□ 0.61
Casc4-202ENSMUST00000089912 Bcl11aQ9QYE3 773 aa18.86■□□□□ 0.61
Casc4-202ENSMUST00000089912 CftrP26361 1476 aa18.82■□□□□ 0.6
Casc4-202ENSMUST00000089912 Crybg2B7ZCC2 1516 aa18.78■□□□□ 0.6
Casc4-202ENSMUST00000089912 Ifnlr1Q8CGK5 535 aa18.71■□□□□ 0.59
Casc4-202ENSMUST00000089912 Stra8P70278 393 aa18.69■□□□□ 0.58
Casc4-202ENSMUST00000089912 Cc2d2aQ8CFW7 1633 aa18.69■□□□□ 0.58
Casc4-202ENSMUST00000089912 Anp32aO35381 247 aa18.69■□□□□ 0.58
Casc4-202ENSMUST00000089912 P3h3Q8CG70 732 aa18.67■□□□□ 0.58
Casc4-202ENSMUST00000089912 Calr4Q3TQS0 420 aa18.67■□□□□ 0.58
Casc4-202ENSMUST00000089912 Setd5Q5XJV7 1441 aa18.66■□□□□ 0.58
Casc4-202ENSMUST00000089912 Hspa5P20029 655 aaKnown RBP18.65■□□□□ 0.58
Casc4-202ENSMUST00000089912 BlmO88700 1416 aa18.64■□□□□ 0.57
Casc4-202ENSMUST00000089912 Sin3aQ60520 1274 aaKnown RBP18.64■□□□□ 0.57
Casc4-202ENSMUST00000089912 Chic2Q9D9G3 165 aa18.61■□□□□ 0.57
Casc4-202ENSMUST00000089912 Ppp4r2Q0VGB7 417 aa18.6■□□□□ 0.57
Casc4-202ENSMUST00000089912 Nolc1E9Q5C9 702 aaKnown RBP18.57■□□□□ 0.56
Casc4-202ENSMUST00000089912 Fmn1Q05860 1466 aa18.53■□□□□ 0.56
Casc4-202ENSMUST00000089912 PrkcshO08795 521 aa18.51■□□□□ 0.55
Casc4-202ENSMUST00000089912 Pelp1Q9DBD5 1123 aaKnown RBP18.51■□□□□ 0.55
Casc4-202ENSMUST00000089912 Eea1Q8BL66 1411 aa18.5■□□□□ 0.55
Casc4-202ENSMUST00000089912 Ncapd3Q6ZQK0 1506 aa18.47■□□□□ 0.55
Casc4-202ENSMUST00000089912 Zbtb4Q5F293 982 aa18.46■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms