RNA–Protein interactions for RNA: ENSMUST00000081339.12

Rrp1b-201, Transcript of Ribosomal RNA processing protein 1 homolog B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rrp1b, Length 4,874 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1b-201ENSMUST00000081339 Rhox8Q6VSS7 320 aa25.78■■□□□ 1.72
Rrp1b-201ENSMUST00000081339 NischQ80TM9 1593 aa24.17■■□□□ 1.46
Rrp1b-201ENSMUST00000081339 Rpgrip1Q9EPQ2 1331 aa23.48■■□□□ 1.35
Rrp1b-201ENSMUST00000081339 Ccdc136Q3TVA9 1136 aa23.29■■□□□ 1.32
Rrp1b-201ENSMUST00000081339 Esf1Q3V1V3 845 aaKnown RBP22.95■■□□□ 1.26
Rrp1b-201ENSMUST00000081339 Abcc9P70170 1546 aa22.83■■□□□ 1.24
Rrp1b-201ENSMUST00000081339 Cngb1E1AZ71 1325 aa22.78■■□□□ 1.24
Rrp1b-201ENSMUST00000081339 Ehmt2Q9Z148 1263 aaKnown RBP22.76■■□□□ 1.23
Rrp1b-201ENSMUST00000081339 Trim41Q5NCC3 630 aa22.65■■□□□ 1.22
Rrp1b-201ENSMUST00000081339 Gm35339A0A140LHH9 1649 aa22.4■■□□□ 1.18
Rrp1b-201ENSMUST00000081339 Abcc8B2RUS7 1588 aa22.4■■□□□ 1.18
Rrp1b-201ENSMUST00000081339 Gab3Q8BSM5 595 aa22.36■■□□□ 1.17
Rrp1b-201ENSMUST00000081339 Zeb1Q64318 1117 aa22.2■■□□□ 1.14
Rrp1b-201ENSMUST00000081339 Las1lA2BE28 776 aaKnown RBP22.12■■□□□ 1.13
Rrp1b-201ENSMUST00000081339 Npm2Q80W85 207 aa22.12■■□□□ 1.13
Rrp1b-201ENSMUST00000081339 Zcchc6Q5BLK4 1491 aaKnown RBP22.08■■□□□ 1.12
Rrp1b-201ENSMUST00000081339 Acin1Q9JIX8 1338 aaKnown RBP21.99■■□□□ 1.11
Rrp1b-201ENSMUST00000081339 Myt1lP97500 1187 aa21.98■■□□□ 1.11
Rrp1b-201ENSMUST00000081339 Wdr66E9Q743 1299 aa21.86■■□□□ 1.09
Rrp1b-201ENSMUST00000081339 Il27Q8K3I6 234 aa21.83■■□□□ 1.09
Rrp1b-201ENSMUST00000081339 Ccdc180J3QNE4 1664 aa21.74■■□□□ 1.07
Rrp1b-201ENSMUST00000081339 HrcG5E8J6 738 aa21.61■■□□□ 1.05
Rrp1b-201ENSMUST00000081339 Ube2uB1AUC4 352 aa21.6■■□□□ 1.05
Rrp1b-201ENSMUST00000081339 Rtl1Q7M732 1744 aa21.52■■□□□ 1.04
Rrp1b-201ENSMUST00000081339 NefmP08553 848 aa21.49■■□□□ 1.03
Rrp1b-201ENSMUST00000081339 Pcgf6Q99NA9 353 aa21.31■■□□□ 1
Rrp1b-201ENSMUST00000081339 UbtfP25976 765 aaKnown RBP21.26■□□□□ 0.99
Rrp1b-201ENSMUST00000081339 Pelp1Q9DBD5 1123 aaKnown RBP21.21■□□□□ 0.99
Rrp1b-201ENSMUST00000081339 Rb1cc1Q9ESK9 1588 aa21.19■□□□□ 0.98
Rrp1b-201ENSMUST00000081339 NacadQ5SWP3 1504 aa21.17■□□□□ 0.98
Rrp1b-201ENSMUST00000081339 CenpbP27790 599 aa21.14■□□□□ 0.97
Rrp1b-201ENSMUST00000081339 Npm1Q61937 292 aaKnown RBP21.13■□□□□ 0.97
Rrp1b-201ENSMUST00000081339 Ap3b1Q9Z1T1 1105 aa21.07■□□□□ 0.96
Rrp1b-201ENSMUST00000081339 Brd4Q9ESU6 1400 aaKnown RBP20.96■□□□□ 0.95
Rrp1b-201ENSMUST00000081339 Cdk11bP24788 784 aaKnown RBP20.89■□□□□ 0.93
Rrp1b-201ENSMUST00000081339 Ubl4bQ9CQ84 188 aa20.86■□□□□ 0.93
Rrp1b-201ENSMUST00000081339 Supt5hO55201 1082 aaKnown RBP20.86■□□□□ 0.93
Rrp1b-201ENSMUST00000081339 Stra8P70278 393 aa20.84■□□□□ 0.93
Rrp1b-201ENSMUST00000081339 Kdm5dQ62240 1548 aa20.83■□□□□ 0.92
Rrp1b-201ENSMUST00000081339 Dcaf1Q80TR8 1506 aa20.74■□□□□ 0.91
Rrp1b-201ENSMUST00000081339 Fam50aQ9WV03 339 aaKnown RBP20.74■□□□□ 0.91
Rrp1b-201ENSMUST00000081339 Chic1Q8CBW7 227 aa20.72■□□□□ 0.91
Rrp1b-201ENSMUST00000081339 Baz1aO88379 1555 aa20.71■□□□□ 0.91
Rrp1b-201ENSMUST00000081339 Nop58Q6DFW4 536 aaKnown RBP20.7■□□□□ 0.9
Rrp1b-201ENSMUST00000081339 Lmod2Q3UHZ5 550 aa20.6■□□□□ 0.89
Rrp1b-201ENSMUST00000081339 Mier1Q5UAK0 511 aa20.57■□□□□ 0.88
Rrp1b-201ENSMUST00000081339 Myt1Q8CFC2 1127 aa20.56■□□□□ 0.88
Rrp1b-201ENSMUST00000081339 Slc24a1Q91WD8 1130 aa20.55■□□□□ 0.88
Rrp1b-201ENSMUST00000081339 Ifnlr1Q8CGK5 535 aa20.51■□□□□ 0.87
Rrp1b-201ENSMUST00000081339 Plekhg3Q4VAC9 1341 aa20.5■□□□□ 0.87
Rrp1b-201ENSMUST00000081339 Tnnt3Q9QZ47 272 aa20.5■□□□□ 0.87
Rrp1b-201ENSMUST00000081339 Ppargc1bQ8VHJ7 1014 aa20.46■□□□□ 0.87
Rrp1b-201ENSMUST00000081339 TonslQ6NZL6 1363 aa20.45■□□□□ 0.86
Rrp1b-201ENSMUST00000081339 Fkbp15Q6P9Q6 1216 aaKnown RBP20.39■□□□□ 0.86
Rrp1b-201ENSMUST00000081339 Neurod1Q60867 357 aa20.38■□□□□ 0.85
Rrp1b-201ENSMUST00000081339 NclP09405 707 aaKnown RBP20.36■□□□□ 0.85
Rrp1b-201ENSMUST00000081339 Kif15Q6P9L6 1387 aa20.34■□□□□ 0.85
Rrp1b-201ENSMUST00000081339 Zbtb7cQ8VCZ7 619 aa20.33■□□□□ 0.84
Rrp1b-201ENSMUST00000081339 Cep164Q5DU05 1446 aa20.33■□□□□ 0.84
Rrp1b-201ENSMUST00000081339 Ercc6F8VPZ5 1481 aa20.32■□□□□ 0.84
Rrp1b-201ENSMUST00000081339 Sycp2Q9CUU3 1500 aa20.31■□□□□ 0.84
Rrp1b-201ENSMUST00000081339 ScribQ80U72 1612 aa20.31■□□□□ 0.84
Rrp1b-201ENSMUST00000081339 Rsf1E9PWW9 1441 aaKnown RBP20.27■□□□□ 0.84
Rrp1b-201ENSMUST00000081339 ClspnQ80YR7 1315 aa20.25■□□□□ 0.83
Rrp1b-201ENSMUST00000081339 Golga3P55937 1487 aa20.22■□□□□ 0.83
Rrp1b-201ENSMUST00000081339 Clip1Q922J3 1391 aa20.22■□□□□ 0.83
Rrp1b-201ENSMUST00000081339 NrdcQ8BHG1 1161 aa20.21■□□□□ 0.83
Rrp1b-201ENSMUST00000081339 Amer1Q7TS75 1132 aa20.21■□□□□ 0.83
Rrp1b-201ENSMUST00000081339 Pds5bQ4VA53 1446 aaKnown RBP20.2■□□□□ 0.82
Rrp1b-201ENSMUST00000081339 Hnrnpul2Q00PI9 745 aaKnown RBP20.15■□□□□ 0.82
Rrp1b-201ENSMUST00000081339 Os9Q8K2C7 672 aa20.15■□□□□ 0.82
Rrp1b-201ENSMUST00000081339 Sall2Q9QX96 1004 aa20.13■□□□□ 0.81
Rrp1b-201ENSMUST00000081339 Anp32bQ9EST5 272 aaKnown RBP20.05■□□□□ 0.8
Rrp1b-201ENSMUST00000081339 Anks4bQ8K3X6 423 aa20.04■□□□□ 0.8
Rrp1b-201ENSMUST00000081339 Eif5bQ05D44 1216 aaKnown RBP20.04■□□□□ 0.8
Rrp1b-201ENSMUST00000081339 Ccdc18Q640L5 1455 aa19.99■□□□□ 0.79
Rrp1b-201ENSMUST00000081339 Cecr2E9Q2Z1 1453 aa19.96■□□□□ 0.79
Rrp1b-201ENSMUST00000081339 Plppr3Q7TPB0 716 aa19.96■□□□□ 0.79
Rrp1b-201ENSMUST00000081339 Ttbk1Q6PCN3 1308 aa19.95■□□□□ 0.78
Rrp1b-201ENSMUST00000081339 Crybg2B7ZCC2 1516 aa19.94■□□□□ 0.78
Rrp1b-201ENSMUST00000081339 Rtl5Q5DTT4 599 aa19.93■□□□□ 0.78
Rrp1b-201ENSMUST00000081339 Eid3Q3V124 375 aa19.93■□□□□ 0.78
Rrp1b-201ENSMUST00000081339 Gm13697A2AK42 830 aa19.92■□□□□ 0.78
Rrp1b-201ENSMUST00000081339 NeflP08551 543 aa19.91■□□□□ 0.78
Rrp1b-201ENSMUST00000081339 Setd5Q5XJV7 1441 aa19.89■□□□□ 0.77
Rrp1b-201ENSMUST00000081339 Csrnp3P59055 597 aa19.87■□□□□ 0.77
Rrp1b-201ENSMUST00000081339 BlmO88700 1416 aa19.87■□□□□ 0.77
Rrp1b-201ENSMUST00000081339 Erich6D3Z6S9 713 aa19.86■□□□□ 0.77
Rrp1b-201ENSMUST00000081339 Chic2Q9D9G3 165 aa19.84■□□□□ 0.77
Rrp1b-201ENSMUST00000081339 Anp32aO35381 247 aa19.82■□□□□ 0.76
Rrp1b-201ENSMUST00000081339 4933416C03RikQ3V063 378 aa19.82■□□□□ 0.76
Rrp1b-201ENSMUST00000081339 Arhgap27A2AB59 869 aa19.81■□□□□ 0.76
Rrp1b-201ENSMUST00000081339 CftrP26361 1476 aa19.81■□□□□ 0.76
Rrp1b-201ENSMUST00000081339 Aplp2Q06335 707 aa19.81■□□□□ 0.76
Rrp1b-201ENSMUST00000081339 Atad2bE9Q166 1460 aaKnown RBP19.8■□□□□ 0.76
Rrp1b-201ENSMUST00000081339 Zbtb4Q5F293 982 aa19.77■□□□□ 0.76
Rrp1b-201ENSMUST00000081339 Ccdc88bQ4QRL3 1481 aa19.76■□□□□ 0.75
Rrp1b-201ENSMUST00000081339 Smarca2Q6DIC0 1577 aa19.72■□□□□ 0.75
Rrp1b-201ENSMUST00000081339 Mapk8ip2Q9ERE9 830 aa19.71■□□□□ 0.75
Rrp1b-201ENSMUST00000081339 Phldb1Q6PDH0 1371 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms