RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Rhox8Q6VSS7 320 aa32,93■■■□□ 2,86
Upf1-201ENSMUST00000075666 Rpgrip1Q9EPQ2 1331 aa31,67■■■□□ 2,66
Upf1-201ENSMUST00000075666 Ehmt2Q9Z148 1263 aaKnown RBP30,67■■■□□ 2,5
Upf1-201ENSMUST00000075666 NischQ80TM9 1593 aa30,13■■■□□ 2,41
Upf1-201ENSMUST00000075666 Acin1Q9JIX8 1338 aaKnown RBP29,86■■■□□ 2,37
Upf1-201ENSMUST00000075666 Las1lA2BE28 776 aaKnown RBP29,84■■■□□ 2,37
Upf1-201ENSMUST00000075666 Ccdc136Q3TVA9 1136 aa29,64■■■□□ 2,34
Upf1-201ENSMUST00000075666 Zeb1Q64318 1117 aa29,38■■■□□ 2,29
Upf1-201ENSMUST00000075666 Ccdc180J3QNE4 1664 aa29,23■■■□□ 2,27
Upf1-201ENSMUST00000075666 Cngb1E1AZ71 1325 aa29,19■■■□□ 2,26
Upf1-201ENSMUST00000075666 Trim41Q5NCC3 630 aa29,19■■■□□ 2,26
Upf1-201ENSMUST00000075666 Pcgf6Q99NA9 353 aa29,19■■■□□ 2,26
Upf1-201ENSMUST00000075666 Wdr66E9Q743 1299 aa29,16■■■□□ 2,26
Upf1-201ENSMUST00000075666 Gab3Q8BSM5 595 aa28,93■■■□□ 2,22
Upf1-201ENSMUST00000075666 Rtl1Q7M732 1744 aa28,91■■■□□ 2,22
Upf1-201ENSMUST00000075666 HrcG5E8J6 738 aa28,87■■■□□ 2,21
Upf1-201ENSMUST00000075666 NefmP08553 848 aa28,7■■■□□ 2,18
Upf1-201ENSMUST00000075666 CenpbP27790 599 aa28,55■■■□□ 2,16
Upf1-201ENSMUST00000075666 Supt5hO55201 1082 aaKnown RBP28,5■■■□□ 2,15
Upf1-201ENSMUST00000075666 Esf1Q3V1V3 845 aaKnown RBP28,45■■■□□ 2,15
Upf1-201ENSMUST00000075666 Abcc9P70170 1546 aa28,45■■■□□ 2,15
Upf1-201ENSMUST00000075666 Pelp1Q9DBD5 1123 aaKnown RBP28,21■■■□□ 2,11
Upf1-201ENSMUST00000075666 UbtfP25976 765 aaKnown RBP28,15■■■□□ 2,1
Upf1-201ENSMUST00000075666 Cdk11bP24788 784 aaKnown RBP28,12■■■□□ 2,09
Upf1-201ENSMUST00000075666 Myt1lP97500 1187 aa28,07■■■□□ 2,08
Upf1-201ENSMUST00000075666 Myt1Q8CFC2 1127 aa28,04■■■□□ 2,08
Upf1-201ENSMUST00000075666 Npm2Q80W85 207 aa27,96■■■□□ 2,07
Upf1-201ENSMUST00000075666 Nop58Q6DFW4 536 aaKnown RBP27,89■■■□□ 2,06
Upf1-201ENSMUST00000075666 Neurod1Q60867 357 aa27,86■■■□□ 2,05
Upf1-201ENSMUST00000075666 Dcaf1Q80TR8 1506 aa27,73■■■□□ 2,03
Upf1-201ENSMUST00000075666 Ube2uB1AUC4 352 aa27,7■■■□□ 2,03
Upf1-201ENSMUST00000075666 Mier1Q5UAK0 511 aa27,68■■■□□ 2,02
Upf1-201ENSMUST00000075666 Ppargc1bQ8VHJ7 1014 aa27,66■■■□□ 2,02
Upf1-201ENSMUST00000075666 Abcc8B2RUS7 1588 aa27,65■■■□□ 2,02
Upf1-201ENSMUST00000075666 Stra8P70278 393 aa27,61■■■□□ 2,01
Upf1-201ENSMUST00000075666 Tnnt3Q9QZ47 272 aa27,45■■□□□ 1,99
Upf1-201ENSMUST00000075666 Sall2Q9QX96 1004 aa27,41■■□□□ 1,98
Upf1-201ENSMUST00000075666 Zcchc6Q5BLK4 1491 aaKnown RBP27,39■■□□□ 1,97
Upf1-201ENSMUST00000075666 Anks4bQ8K3X6 423 aa27,37■■□□□ 1,97
Upf1-201ENSMUST00000075666 Slc24a1Q91WD8 1130 aa27,34■■□□□ 1,97
Upf1-201ENSMUST00000075666 TonslQ6NZL6 1363 aa27,32■■□□□ 1,96
Upf1-201ENSMUST00000075666 Csrnp3P59055 597 aa27,3■■□□□ 1,96
Upf1-201ENSMUST00000075666 ClspnQ80YR7 1315 aa27,25■■□□□ 1,95
Upf1-201ENSMUST00000075666 Amer1Q7TS75 1132 aa27,15■■□□□ 1,94
Upf1-201ENSMUST00000075666 Cep164Q5DU05 1446 aa27,07■■□□□ 1,92
Upf1-201ENSMUST00000075666 Aplp2Q06335 707 aa27,07■■□□□ 1,92
Upf1-201ENSMUST00000075666 DiexfQ8BTT6 772 aaKnown RBP27,05■■□□□ 1,92
Upf1-201ENSMUST00000075666 Gm38655A0A286YDK6 273 aa27,03■■□□□ 1,92
Upf1-201ENSMUST00000075666 NclP09405 707 aaKnown RBP27■■□□□ 1,91
Upf1-201ENSMUST00000075666 Ttbk1Q6PCN3 1308 aa26,98■■□□□ 1,91
Upf1-201ENSMUST00000075666 1700123L14RikQ3V2K7 440 aa26,94■■□□□ 1,9
Upf1-201ENSMUST00000075666 Fam50aQ9WV03 339 aaKnown RBP26,85■■□□□ 1,89
Upf1-201ENSMUST00000075666 Chic1Q8CBW7 227 aa26,85■■□□□ 1,89
Upf1-201ENSMUST00000075666 Rtl5Q5DTT4 599 aa26,83■■□□□ 1,89
Upf1-201ENSMUST00000075666 Ap3b1Q9Z1T1 1105 aa26,83■■□□□ 1,89
Upf1-201ENSMUST00000075666 Gm35339A0A140LHH9 1649 aa26,8■■□□□ 1,88
Upf1-201ENSMUST00000075666 Eif5bQ05D44 1216 aaKnown RBP26,77■■□□□ 1,88
Upf1-201ENSMUST00000075666 Anp32aO35381 247 aa26,75■■□□□ 1,87
Upf1-201ENSMUST00000075666 Il27Q8K3I6 234 aa26,72■■□□□ 1,87
Upf1-201ENSMUST00000075666 NrdcQ8BHG1 1161 aa26,72■■□□□ 1,87
Upf1-201ENSMUST00000075666 Plekhg3Q4VAC9 1341 aa26,69■■□□□ 1,86
Upf1-201ENSMUST00000075666 4933416C03RikQ3V063 378 aa26,57■■□□□ 1,84
Upf1-201ENSMUST00000075666 Aebp2Q9Z248 504 aaKnown RBP26,54■■□□□ 1,84
Upf1-201ENSMUST00000075666 Mapk8ip2Q9ERE9 830 aa26,53■■□□□ 1,84
Upf1-201ENSMUST00000075666 Eid3Q3V124 375 aa26,52■■□□□ 1,84
Upf1-201ENSMUST00000075666 Rb1cc1Q9ESK9 1588 aa26,49■■□□□ 1,83
Upf1-201ENSMUST00000075666 Brd4Q9ESU6 1400 aaKnown RBP26,36■■□□□ 1,81
Upf1-201ENSMUST00000075666 NeflP08551 543 aa26,33■■□□□ 1,81
Upf1-201ENSMUST00000075666 Clip1Q922J3 1391 aa26,3■■□□□ 1,8
Upf1-201ENSMUST00000075666 Anp32bQ9EST5 272 aaKnown RBP26,25■■□□□ 1,79
Upf1-201ENSMUST00000075666 Fam71e1A1L3C1 212 aa26,23■■□□□ 1,79
Upf1-201ENSMUST00000075666 Calr4Q3TQS0 420 aa26,21■■□□□ 1,79
Upf1-201ENSMUST00000075666 Lmod2Q3UHZ5 550 aa26,18■■□□□ 1,78
Upf1-201ENSMUST00000075666 Ppp4r2Q0VGB7 417 aa26,05■■□□□ 1,76
Upf1-201ENSMUST00000075666 Rsf1E9PWW9 1441 aaKnown RBP26,01■■□□□ 1,75
Upf1-201ENSMUST00000075666 DaxxO35613 739 aa25,99■■□□□ 1,75
Upf1-201ENSMUST00000075666 Baz1aO88379 1555 aa25,99■■□□□ 1,75
Upf1-201ENSMUST00000075666 Wdr43Q6ZQL4 677 aaKnown RBP25,92■■□□□ 1,74
Upf1-201ENSMUST00000075666 Hnrnpul2Q00PI9 745 aaKnown RBP25,92■■□□□ 1,74
Upf1-201ENSMUST00000075666 SafbD3YXK2 937 aaKnown RBP25,89■■□□□ 1,74
Upf1-201ENSMUST00000075666 Bcl11aQ9QYE3 773 aa25,89■■□□□ 1,74
Upf1-201ENSMUST00000075666 Golga3P55937 1487 aa25,86■■□□□ 1,73
Upf1-201ENSMUST00000075666 Ccer2J3QPU5 274 aa25,84■■□□□ 1,73
Upf1-201ENSMUST00000075666 Mrs2Q5NCE8 434 aa25,74■■□□□ 1,71
Upf1-201ENSMUST00000075666 BlmO88700 1416 aa25,6■■□□□ 1,69
Upf1-201ENSMUST00000075666 NacadQ5SWP3 1504 aa25,6■■□□□ 1,69
Upf1-201ENSMUST00000075666 Ccdc88bQ4QRL3 1481 aa25,59■■□□□ 1,69
Upf1-201ENSMUST00000075666 Ccdc9Q8VC31 543 aaKnown RBP25,56■■□□□ 1,68
Upf1-201ENSMUST00000075666 Npm1Q61937 292 aaKnown RBP25,54■■□□□ 1,68
Upf1-201ENSMUST00000075666 Setd5Q5XJV7 1441 aa25,53■■□□□ 1,68
Upf1-201ENSMUST00000075666 Os9Q8K2C7 672 aa25,52■■□□□ 1,68
Upf1-201ENSMUST00000075666 4930567H17RikQ3V0K5 233 aa25,52■■□□□ 1,68
Upf1-201ENSMUST00000075666 Hsp90aa1P07901 733 aaKnown RBP25,51■■□□□ 1,67
Upf1-201ENSMUST00000075666 Zbtb4Q5F293 982 aa25,46■■□□□ 1,67
Upf1-201ENSMUST00000075666 P3h3Q8CG70 732 aa25,45■■□□□ 1,66
Upf1-201ENSMUST00000075666 Chic2Q9D9G3 165 aa25,43■■□□□ 1,66
Upf1-201ENSMUST00000075666 Ccdc27Q3V036 639 aa25,41■■□□□ 1,66
Upf1-201ENSMUST00000075666 Zbtb7cQ8VCZ7 619 aa25,4■■□□□ 1,66
Upf1-201ENSMUST00000075666 Upf2A2AT37 1269 aaKnown RBP25,36■■□□□ 1,65
Upf1-201ENSMUST00000075666 Eea1Q8BL66 1411 aa25,35■■□□□ 1,65
Retrieved 100 of 22,080 RNA–protein pairs in 19,5 ms