RNA–Protein interactions for RNA: ENSMUST00000073043.4

Cxcl12-201, Transcript of Stromal cell-derived factor 1, mousemouse

TSL 1 (best) BASIC

Gene Cxcl12, Length 5,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12-201ENSMUST00000073043 Rhox8Q6VSS7 320 aa18.36■□□□□ 0.53
Cxcl12-201ENSMUST00000073043 NischQ80TM9 1593 aa16.85■□□□□ 0.29
Cxcl12-201ENSMUST00000073043 Ccdc136Q3TVA9 1136 aa16.44■□□□□ 0.22
Cxcl12-201ENSMUST00000073043 Esf1Q3V1V3 845 aaKnown RBP16.26■□□□□ 0.19
Cxcl12-201ENSMUST00000073043 Cngb1E1AZ71 1325 aa16.23■□□□□ 0.19
Cxcl12-201ENSMUST00000073043 Ehmt2Q9Z148 1263 aaKnown RBP16.21■□□□□ 0.19
Cxcl12-201ENSMUST00000073043 Rpgrip1Q9EPQ2 1331 aa16.2■□□□□ 0.18
Cxcl12-201ENSMUST00000073043 Trim41Q5NCC3 630 aa16.1■□□□□ 0.17
Cxcl12-201ENSMUST00000073043 Gab3Q8BSM5 595 aa15.94■□□□□ 0.14
Cxcl12-201ENSMUST00000073043 Zeb1Q64318 1117 aa15.81■□□□□ 0.12
Cxcl12-201ENSMUST00000073043 Npm2Q80W85 207 aa15.81■□□□□ 0.12
Cxcl12-201ENSMUST00000073043 Abcc9P70170 1546 aa15.8■□□□□ 0.12
Cxcl12-201ENSMUST00000073043 Myt1lP97500 1187 aa15.67■□□□□ 0.1
Cxcl12-201ENSMUST00000073043 Las1lA2BE28 776 aaKnown RBP15.63■□□□□ 0.09
Cxcl12-201ENSMUST00000073043 Ube2uB1AUC4 352 aa15.6■□□□□ 0.09
Cxcl12-201ENSMUST00000073043 Wdr66E9Q743 1299 aa15.58■□□□□ 0.09
Cxcl12-201ENSMUST00000073043 Ccdc180J3QNE4 1664 aa15.56■□□□□ 0.08
Cxcl12-201ENSMUST00000073043 Rtl1Q7M732 1744 aa15.5■□□□□ 0.07
Cxcl12-201ENSMUST00000073043 Zcchc6Q5BLK4 1491 aaKnown RBP15.49■□□□□ 0.07
Cxcl12-201ENSMUST00000073043 Abcc8B2RUS7 1588 aa15.48■□□□□ 0.07
Cxcl12-201ENSMUST00000073043 Gm35339A0A140LHH9 1649 aa15.46■□□□□ 0.07
Cxcl12-201ENSMUST00000073043 HrcG5E8J6 738 aa15.38■□□□□ 0.05
Cxcl12-201ENSMUST00000073043 Il27Q8K3I6 234 aa15.32■□□□□ 0.04
Cxcl12-201ENSMUST00000073043 UbtfP25976 765 aaKnown RBP15.29■□□□□ 0.04
Cxcl12-201ENSMUST00000073043 Acin1Q9JIX8 1338 aaKnown RBP15.28■□□□□ 0.04
Cxcl12-201ENSMUST00000073043 NefmP08553 848 aa15.16■□□□□ 0.02
Cxcl12-201ENSMUST00000073043 Ap3b1Q9Z1T1 1105 aa14.98□□□□□ -0.01
Cxcl12-201ENSMUST00000073043 Fam50aQ9WV03 339 aaKnown RBP14.86□□□□□ -0.03
Cxcl12-201ENSMUST00000073043 Rb1cc1Q9ESK9 1588 aa14.84□□□□□ -0.03
Cxcl12-201ENSMUST00000073043 Pelp1Q9DBD5 1123 aaKnown RBP14.81□□□□□ -0.04
Cxcl12-201ENSMUST00000073043 Npm1Q61937 292 aaKnown RBP14.8□□□□□ -0.04
Cxcl12-201ENSMUST00000073043 Brd4Q9ESU6 1400 aaKnown RBP14.78□□□□□ -0.04
Cxcl12-201ENSMUST00000073043 Stra8P70278 393 aa14.76□□□□□ -0.05
Cxcl12-201ENSMUST00000073043 Slc24a1Q91WD8 1130 aa14.74□□□□□ -0.05
Cxcl12-201ENSMUST00000073043 NacadQ5SWP3 1504 aa14.69□□□□□ -0.06
Cxcl12-201ENSMUST00000073043 Neurod1Q60867 357 aa14.65□□□□□ -0.06
Cxcl12-201ENSMUST00000073043 NclP09405 707 aaKnown RBP14.64□□□□□ -0.07
Cxcl12-201ENSMUST00000073043 Dcaf1Q80TR8 1506 aa14.64□□□□□ -0.07
Cxcl12-201ENSMUST00000073043 Mier1Q5UAK0 511 aa14.61□□□□□ -0.07
Cxcl12-201ENSMUST00000073043 Lmod2Q3UHZ5 550 aa14.59□□□□□ -0.07
Cxcl12-201ENSMUST00000073043 Plekhg3Q4VAC9 1341 aa14.59□□□□□ -0.07
Cxcl12-201ENSMUST00000073043 Pcgf6Q99NA9 353 aa14.58□□□□□ -0.08
Cxcl12-201ENSMUST00000073043 TonslQ6NZL6 1363 aa14.58□□□□□ -0.08
Cxcl12-201ENSMUST00000073043 Cdk11bP24788 784 aaKnown RBP14.58□□□□□ -0.08
Cxcl12-201ENSMUST00000073043 CenpbP27790 599 aa14.55□□□□□ -0.08
Cxcl12-201ENSMUST00000073043 Chic1Q8CBW7 227 aa14.55□□□□□ -0.08
Cxcl12-201ENSMUST00000073043 Cep164Q5DU05 1446 aa14.54□□□□□ -0.08
Cxcl12-201ENSMUST00000073043 Os9Q8K2C7 672 aa14.52□□□□□ -0.09
Cxcl12-201ENSMUST00000073043 Ppargc1bQ8VHJ7 1014 aa14.51□□□□□ -0.09
Cxcl12-201ENSMUST00000073043 Baz1aO88379 1555 aa14.5□□□□□ -0.09
Cxcl12-201ENSMUST00000073043 Anp32bQ9EST5 272 aaKnown RBP14.49□□□□□ -0.09
Cxcl12-201ENSMUST00000073043 NrdcQ8BHG1 1161 aa14.48□□□□□ -0.09
Cxcl12-201ENSMUST00000073043 Nop58Q6DFW4 536 aaKnown RBP14.46□□□□□ -0.09
Cxcl12-201ENSMUST00000073043 Ubl4bQ9CQ84 188 aa14.45□□□□□ -0.1
Cxcl12-201ENSMUST00000073043 Supt5hO55201 1082 aaKnown RBP14.43□□□□□ -0.1
Cxcl12-201ENSMUST00000073043 Clip1Q922J3 1391 aa14.41□□□□□ -0.1
Cxcl12-201ENSMUST00000073043 Zbtb7cQ8VCZ7 619 aa14.41□□□□□ -0.1
Cxcl12-201ENSMUST00000073043 Kdm5dQ62240 1548 aa14.37□□□□□ -0.11
Cxcl12-201ENSMUST00000073043 Ifnlr1Q8CGK5 535 aa14.35□□□□□ -0.11
Cxcl12-201ENSMUST00000073043 Hnrnpul2Q00PI9 745 aaKnown RBP14.33□□□□□ -0.12
Cxcl12-201ENSMUST00000073043 Tnnt3Q9QZ47 272 aa14.32□□□□□ -0.12
Cxcl12-201ENSMUST00000073043 Ercc6F8VPZ5 1481 aa14.32□□□□□ -0.12
Cxcl12-201ENSMUST00000073043 Eif5bQ05D44 1216 aaKnown RBP14.3□□□□□ -0.12
Cxcl12-201ENSMUST00000073043 Fkbp15Q6P9Q6 1216 aaKnown RBP14.28□□□□□ -0.12
Cxcl12-201ENSMUST00000073043 Golga3P55937 1487 aa14.26□□□□□ -0.13
Cxcl12-201ENSMUST00000073043 NeflP08551 543 aa14.23□□□□□ -0.13
Cxcl12-201ENSMUST00000073043 Eid3Q3V124 375 aa14.22□□□□□ -0.13
Cxcl12-201ENSMUST00000073043 ClspnQ80YR7 1315 aa14.22□□□□□ -0.13
Cxcl12-201ENSMUST00000073043 Rsf1E9PWW9 1441 aaKnown RBP14.19□□□□□ -0.14
Cxcl12-201ENSMUST00000073043 Kif15Q6P9L6 1387 aa14.19□□□□□ -0.14
Cxcl12-201ENSMUST00000073043 Gm13697A2AK42 830 aa14.18□□□□□ -0.14
Cxcl12-201ENSMUST00000073043 Erich6D3Z6S9 713 aa14.17□□□□□ -0.14
Cxcl12-201ENSMUST00000073043 Pds5bQ4VA53 1446 aaKnown RBP14.16□□□□□ -0.14
Cxcl12-201ENSMUST00000073043 Zbtb4Q5F293 982 aa14.13□□□□□ -0.15
Cxcl12-201ENSMUST00000073043 BlmO88700 1416 aa14.12□□□□□ -0.15
Cxcl12-201ENSMUST00000073043 Ccer2J3QPU5 274 aa14.11□□□□□ -0.15
Cxcl12-201ENSMUST00000073043 Setd5Q5XJV7 1441 aa14.1□□□□□ -0.15
Cxcl12-201ENSMUST00000073043 Ccdc18Q640L5 1455 aa14.07□□□□□ -0.16
Cxcl12-201ENSMUST00000073043 Chic2Q9D9G3 165 aa14.07□□□□□ -0.16
Cxcl12-201ENSMUST00000073043 Mapk8ip2Q9ERE9 830 aa14.06□□□□□ -0.16
Cxcl12-201ENSMUST00000073043 Atp1b4Q99ME6 356 aa14.06□□□□□ -0.16
Cxcl12-201ENSMUST00000073043 Hdac5Q9Z2V6 1113 aa14.06□□□□□ -0.16
Cxcl12-201ENSMUST00000073043 Amer1Q7TS75 1132 aa14□□□□□ -0.17
Cxcl12-201ENSMUST00000073043 Sycp2Q9CUU3 1500 aa14□□□□□ -0.17
Cxcl12-201ENSMUST00000073043 Ttbk1Q6PCN3 1308 aa13.99□□□□□ -0.17
Cxcl12-201ENSMUST00000073043 Sall2Q9QX96 1004 aa13.99□□□□□ -0.17
Cxcl12-201ENSMUST00000073043 Nlrp6Q91WS2 869 aa13.96□□□□□ -0.17
Cxcl12-201ENSMUST00000073043 Prdm10Q3UTQ7 1184 aa13.95□□□□□ -0.18
Cxcl12-201ENSMUST00000073043 Gm13695A2AK44 830 aa13.94□□□□□ -0.18
Cxcl12-201ENSMUST00000073043 Eea1Q8BL66 1411 aa13.94□□□□□ -0.18
Cxcl12-201ENSMUST00000073043 Plppr3Q7TPB0 716 aa13.91□□□□□ -0.18
Cxcl12-201ENSMUST00000073043 Clstn2Q9ER65 966 aa13.9□□□□□ -0.18
Cxcl12-201ENSMUST00000073043 Arhgap27A2AB59 869 aa13.87□□□□□ -0.19
Cxcl12-201ENSMUST00000073043 Crybg2B7ZCC2 1516 aa13.86□□□□□ -0.19
Cxcl12-201ENSMUST00000073043 Ccdc88bQ4QRL3 1481 aa13.85□□□□□ -0.19
Cxcl12-201ENSMUST00000073043 4933416C03RikQ3V063 378 aa13.84□□□□□ -0.19
Cxcl12-201ENSMUST00000073043 ScribQ80U72 1612 aa13.84□□□□□ -0.19
Cxcl12-201ENSMUST00000073043 Fmn1Q05860 1466 aa13.84□□□□□ -0.19
Cxcl12-201ENSMUST00000073043 Polr3glQ8R0C0 218 aa13.78□□□□□ -0.2
Cxcl12-201ENSMUST00000073043 CftrP26361 1476 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms