RNA–Protein interactions for RNA: ENSMUST00000072857.12

Scfd2-201, Transcript of Sec1 family domain-containing protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scfd2, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd2-201ENSMUST00000072857 Rhox8Q6VSS7 320 aa15.75■□□□□ 0.11
Scfd2-201ENSMUST00000072857 NischQ80TM9 1593 aa15.23■□□□□ 0.03
Scfd2-201ENSMUST00000072857 Ehmt2Q9Z148 1263 aaKnown RBP14.83□□□□□ -0.04
Scfd2-201ENSMUST00000072857 Ccdc136Q3TVA9 1136 aa14.5□□□□□ -0.09
Scfd2-201ENSMUST00000072857 Abcc9P70170 1546 aa14.49□□□□□ -0.09
Scfd2-201ENSMUST00000072857 Rpgrip1Q9EPQ2 1331 aa14.22□□□□□ -0.13
Scfd2-201ENSMUST00000072857 Abcc8B2RUS7 1588 aa14.19□□□□□ -0.14
Scfd2-201ENSMUST00000072857 Acin1Q9JIX8 1338 aaKnown RBP14.15□□□□□ -0.15
Scfd2-201ENSMUST00000072857 Pcgf6Q99NA9 353 aa14.02□□□□□ -0.16
Scfd2-201ENSMUST00000072857 Trim41Q5NCC3 630 aa13.99□□□□□ -0.17
Scfd2-201ENSMUST00000072857 Gm35339A0A140LHH9 1649 aa13.99□□□□□ -0.17
Scfd2-201ENSMUST00000072857 Ccdc180J3QNE4 1664 aa13.97□□□□□ -0.17
Scfd2-201ENSMUST00000072857 Gab3Q8BSM5 595 aa13.96□□□□□ -0.17
Scfd2-201ENSMUST00000072857 Cngb1E1AZ71 1325 aa13.88□□□□□ -0.19
Scfd2-201ENSMUST00000072857 Supt5hO55201 1082 aaKnown RBP13.82□□□□□ -0.2
Scfd2-201ENSMUST00000072857 Rtl1Q7M732 1744 aa13.81□□□□□ -0.2
Scfd2-201ENSMUST00000072857 Zeb1Q64318 1117 aa13.78□□□□□ -0.2
Scfd2-201ENSMUST00000072857 HrcG5E8J6 738 aa13.67□□□□□ -0.22
Scfd2-201ENSMUST00000072857 Zcchc6Q5BLK4 1491 aaKnown RBP13.65□□□□□ -0.22
Scfd2-201ENSMUST00000072857 Esf1Q3V1V3 845 aaKnown RBP13.61□□□□□ -0.23
Scfd2-201ENSMUST00000072857 Neurod1Q60867 357 aa13.55□□□□□ -0.24
Scfd2-201ENSMUST00000072857 Ppargc1bQ8VHJ7 1014 aa13.5□□□□□ -0.25
Scfd2-201ENSMUST00000072857 Wdr66E9Q743 1299 aa13.45□□□□□ -0.26
Scfd2-201ENSMUST00000072857 Myt1lP97500 1187 aa13.45□□□□□ -0.26
Scfd2-201ENSMUST00000072857 Dcaf1Q80TR8 1506 aa13.44□□□□□ -0.26
Scfd2-201ENSMUST00000072857 UbtfP25976 765 aaKnown RBP13.41□□□□□ -0.26
Scfd2-201ENSMUST00000072857 Chic1Q8CBW7 227 aa13.38□□□□□ -0.27
Scfd2-201ENSMUST00000072857 Rb1cc1Q9ESK9 1588 aa13.37□□□□□ -0.27
Scfd2-201ENSMUST00000072857 Mier1Q5UAK0 511 aa13.31□□□□□ -0.28
Scfd2-201ENSMUST00000072857 Sall2Q9QX96 1004 aa13.31□□□□□ -0.28
Scfd2-201ENSMUST00000072857 Npm2Q80W85 207 aa13.24□□□□□ -0.29
Scfd2-201ENSMUST00000072857 Gm38655A0A286YDK6 273 aa13.22□□□□□ -0.29
Scfd2-201ENSMUST00000072857 Csrnp3P59055 597 aa13.2□□□□□ -0.3
Scfd2-201ENSMUST00000072857 Las1lA2BE28 776 aaKnown RBP13.19□□□□□ -0.3
Scfd2-201ENSMUST00000072857 NefmP08553 848 aa13.13□□□□□ -0.31
Scfd2-201ENSMUST00000072857 Aebp2Q9Z248 504 aaKnown RBP13.1□□□□□ -0.31
Scfd2-201ENSMUST00000072857 1700123L14RikQ3V2K7 440 aa13.1□□□□□ -0.31
Scfd2-201ENSMUST00000072857 Cep164Q5DU05 1446 aa13.1□□□□□ -0.31
Scfd2-201ENSMUST00000072857 Kdm5dQ62240 1548 aa13.08□□□□□ -0.32
Scfd2-201ENSMUST00000072857 Baz1aO88379 1555 aa13.07□□□□□ -0.32
Scfd2-201ENSMUST00000072857 Il27Q8K3I6 234 aa13.06□□□□□ -0.32
Scfd2-201ENSMUST00000072857 Ap3b1Q9Z1T1 1105 aa13.05□□□□□ -0.32
Scfd2-201ENSMUST00000072857 ScribQ80U72 1612 aa13.04□□□□□ -0.32
Scfd2-201ENSMUST00000072857 DiexfQ8BTT6 772 aaKnown RBP13.02□□□□□ -0.33
Scfd2-201ENSMUST00000072857 Rsf1E9PWW9 1441 aaKnown RBP13.01□□□□□ -0.33
Scfd2-201ENSMUST00000072857 Plekhg3Q4VAC9 1341 aa12.99□□□□□ -0.33
Scfd2-201ENSMUST00000072857 Nop58Q6DFW4 536 aaKnown RBP12.94□□□□□ -0.34
Scfd2-201ENSMUST00000072857 Cdk11bP24788 784 aaKnown RBP12.93□□□□□ -0.34
Scfd2-201ENSMUST00000072857 NacadQ5SWP3 1504 aa12.92□□□□□ -0.34
Scfd2-201ENSMUST00000072857 Anks4bQ8K3X6 423 aa12.91□□□□□ -0.34
Scfd2-201ENSMUST00000072857 Ccdc88bQ4QRL3 1481 aa12.9□□□□□ -0.34
Scfd2-201ENSMUST00000072857 Eid3Q3V124 375 aa12.89□□□□□ -0.35
Scfd2-201ENSMUST00000072857 Mapk8ip2Q9ERE9 830 aa12.89□□□□□ -0.35
Scfd2-201ENSMUST00000072857 Ube2uB1AUC4 352 aa12.87□□□□□ -0.35
Scfd2-201ENSMUST00000072857 Brd4Q9ESU6 1400 aaKnown RBP12.85□□□□□ -0.35
Scfd2-201ENSMUST00000072857 CenpbP27790 599 aa12.85□□□□□ -0.35
Scfd2-201ENSMUST00000072857 TonslQ6NZL6 1363 aa12.78□□□□□ -0.36
Scfd2-201ENSMUST00000072857 Slc24a1Q91WD8 1130 aa12.77□□□□□ -0.36
Scfd2-201ENSMUST00000072857 Fam50aQ9WV03 339 aaKnown RBP12.77□□□□□ -0.37
Scfd2-201ENSMUST00000072857 Cecr2E9Q2Z1 1453 aa12.77□□□□□ -0.37
Scfd2-201ENSMUST00000072857 Golga3P55937 1487 aa12.73□□□□□ -0.37
Scfd2-201ENSMUST00000072857 ClspnQ80YR7 1315 aa12.73□□□□□ -0.37
Scfd2-201ENSMUST00000072857 Lmod2Q3UHZ5 550 aa12.72□□□□□ -0.37
Scfd2-201ENSMUST00000072857 SafbD3YXK2 937 aaKnown RBP12.7□□□□□ -0.38
Scfd2-201ENSMUST00000072857 Myt1Q8CFC2 1127 aa12.7□□□□□ -0.38
Scfd2-201ENSMUST00000072857 Bcl11aQ9QYE3 773 aa12.68□□□□□ -0.38
Scfd2-201ENSMUST00000072857 Smarca2Q6DIC0 1577 aa12.67□□□□□ -0.38
Scfd2-201ENSMUST00000072857 Clip1Q922J3 1391 aa12.65□□□□□ -0.38
Scfd2-201ENSMUST00000072857 NclP09405 707 aaKnown RBP12.62□□□□□ -0.39
Scfd2-201ENSMUST00000072857 Hnrnpul2Q00PI9 745 aaKnown RBP12.59□□□□□ -0.39
Scfd2-201ENSMUST00000072857 Aplp2Q06335 707 aa12.59□□□□□ -0.39
Scfd2-201ENSMUST00000072857 Sycp2Q9CUU3 1500 aa12.57□□□□□ -0.4
Scfd2-201ENSMUST00000072857 Synj1Q8CHC4 1574 aa12.54□□□□□ -0.4
Scfd2-201ENSMUST00000072857 Fam71e1A1L3C1 212 aa12.54□□□□□ -0.4
Scfd2-201ENSMUST00000072857 PrkcshO08795 521 aa12.5□□□□□ -0.41
Scfd2-201ENSMUST00000072857 CftrP26361 1476 aa12.47□□□□□ -0.41
Scfd2-201ENSMUST00000072857 Eif5bQ05D44 1216 aaKnown RBP12.46□□□□□ -0.42
Scfd2-201ENSMUST00000072857 Amer1Q7TS75 1132 aa12.44□□□□□ -0.42
Scfd2-201ENSMUST00000072857 Crybg2B7ZCC2 1516 aa12.42□□□□□ -0.42
Scfd2-201ENSMUST00000072857 Cep162Q6ZQ06 1403 aa12.41□□□□□ -0.42
Scfd2-201ENSMUST00000072857 Rapgef2Q8CHG7 1496 aa12.41□□□□□ -0.42
Scfd2-201ENSMUST00000072857 Setd5Q5XJV7 1441 aa12.37□□□□□ -0.43
Scfd2-201ENSMUST00000072857 Chic2Q9D9G3 165 aa12.37□□□□□ -0.43
Scfd2-201ENSMUST00000072857 BlmO88700 1416 aa12.36□□□□□ -0.43
Scfd2-201ENSMUST00000072857 Npm1Q61937 292 aaKnown RBP12.35□□□□□ -0.43
Scfd2-201ENSMUST00000072857 Zbtb7cQ8VCZ7 619 aa12.32□□□□□ -0.44
Scfd2-201ENSMUST00000072857 Zbtb4Q5F293 982 aa12.3□□□□□ -0.44
Scfd2-201ENSMUST00000072857 Ifnlr1Q8CGK5 535 aa12.3□□□□□ -0.44
Scfd2-201ENSMUST00000072857 Kif15Q6P9L6 1387 aa12.29□□□□□ -0.44
Scfd2-201ENSMUST00000072857 Ttbk1Q6PCN3 1308 aa12.28□□□□□ -0.44
Scfd2-201ENSMUST00000072857 Cc2d2aQ8CFW7 1633 aa12.28□□□□□ -0.44
Scfd2-201ENSMUST00000072857 Fmn1Q05860 1466 aa12.26□□□□□ -0.45
Scfd2-201ENSMUST00000072857 Hspa5P20029 655 aaKnown RBP12.25□□□□□ -0.45
Scfd2-201ENSMUST00000072857 Stra8P70278 393 aa12.24□□□□□ -0.45
Scfd2-201ENSMUST00000072857 Sin3aQ60520 1274 aaKnown RBP12.24□□□□□ -0.45
Scfd2-201ENSMUST00000072857 Eea1Q8BL66 1411 aa12.23□□□□□ -0.45
Scfd2-201ENSMUST00000072857 P3h3Q8CG70 732 aa12.23□□□□□ -0.45
Scfd2-201ENSMUST00000072857 Tnnt3Q9QZ47 272 aa12.23□□□□□ -0.45
Scfd2-201ENSMUST00000072857 Ubl4bQ9CQ84 188 aa12.22□□□□□ -0.45
Scfd2-201ENSMUST00000072857 Nolc1E9Q5C9 702 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms