RNA–Protein interactions for RNA: ENSMUST00000072080.9

Lrrc40-201, Transcript of Leucine-rich repeat-containing protein 40, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lrrc40, Length 4,142 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40-201ENSMUST00000072080 Rhox8Q6VSS7 320 aa12.97□□□□□ -0.33
Lrrc40-201ENSMUST00000072080 NischQ80TM9 1593 aa12.96□□□□□ -0.33
Lrrc40-201ENSMUST00000072080 Rpgrip1Q9EPQ2 1331 aa12.52□□□□□ -0.41
Lrrc40-201ENSMUST00000072080 Abcc9P70170 1546 aa12.47□□□□□ -0.41
Lrrc40-201ENSMUST00000072080 Ehmt2Q9Z148 1263 aaKnown RBP12.46□□□□□ -0.41
Lrrc40-201ENSMUST00000072080 Ccdc180J3QNE4 1664 aa12.28□□□□□ -0.44
Lrrc40-201ENSMUST00000072080 Acin1Q9JIX8 1338 aaKnown RBP12.26□□□□□ -0.45
Lrrc40-201ENSMUST00000072080 Rtl1Q7M732 1744 aa12.26□□□□□ -0.45
Lrrc40-201ENSMUST00000072080 Gm35339A0A140LHH9 1649 aa12.18□□□□□ -0.46
Lrrc40-201ENSMUST00000072080 Abcc8B2RUS7 1588 aa12.13□□□□□ -0.47
Lrrc40-201ENSMUST00000072080 Pcgf6Q99NA9 353 aa12.09□□□□□ -0.47
Lrrc40-201ENSMUST00000072080 Ccdc136Q3TVA9 1136 aa11.98□□□□□ -0.49
Lrrc40-201ENSMUST00000072080 Zcchc6Q5BLK4 1491 aaKnown RBP11.88□□□□□ -0.51
Lrrc40-201ENSMUST00000072080 HrcG5E8J6 738 aa11.84□□□□□ -0.51
Lrrc40-201ENSMUST00000072080 Supt5hO55201 1082 aaKnown RBP11.84□□□□□ -0.51
Lrrc40-201ENSMUST00000072080 Trim41Q5NCC3 630 aa11.76□□□□□ -0.53
Lrrc40-201ENSMUST00000072080 Dcaf1Q80TR8 1506 aa11.75□□□□□ -0.53
Lrrc40-201ENSMUST00000072080 Zeb1Q64318 1117 aa11.7□□□□□ -0.54
Lrrc40-201ENSMUST00000072080 Neurod1Q60867 357 aa11.66□□□□□ -0.54
Lrrc40-201ENSMUST00000072080 Gab3Q8BSM5 595 aa11.54□□□□□ -0.56
Lrrc40-201ENSMUST00000072080 Cngb1E1AZ71 1325 aa11.51□□□□□ -0.57
Lrrc40-201ENSMUST00000072080 Las1lA2BE28 776 aaKnown RBP11.45□□□□□ -0.58
Lrrc40-201ENSMUST00000072080 Sall2Q9QX96 1004 aa11.41□□□□□ -0.58
Lrrc40-201ENSMUST00000072080 Rb1cc1Q9ESK9 1588 aa11.38□□□□□ -0.59
Lrrc40-201ENSMUST00000072080 Mier1Q5UAK0 511 aa11.37□□□□□ -0.59
Lrrc40-201ENSMUST00000072080 NefmP08553 848 aa11.36□□□□□ -0.59
Lrrc40-201ENSMUST00000072080 Wdr66E9Q743 1299 aa11.35□□□□□ -0.59
Lrrc40-201ENSMUST00000072080 Cep164Q5DU05 1446 aa11.33□□□□□ -0.6
Lrrc40-201ENSMUST00000072080 Csrnp3P59055 597 aa11.33□□□□□ -0.6
Lrrc40-201ENSMUST00000072080 Ppargc1bQ8VHJ7 1014 aa11.32□□□□□ -0.6
Lrrc40-201ENSMUST00000072080 1700123L14RikQ3V2K7 440 aa11.31□□□□□ -0.6
Lrrc40-201ENSMUST00000072080 Chic1Q8CBW7 227 aa11.31□□□□□ -0.6
Lrrc40-201ENSMUST00000072080 Anks4bQ8K3X6 423 aa11.22□□□□□ -0.61
Lrrc40-201ENSMUST00000072080 UbtfP25976 765 aaKnown RBP11.22□□□□□ -0.61
Lrrc40-201ENSMUST00000072080 Baz1aO88379 1555 aa11.19□□□□□ -0.62
Lrrc40-201ENSMUST00000072080 Gm38655A0A286YDK6 273 aa11.19□□□□□ -0.62
Lrrc40-201ENSMUST00000072080 Aebp2Q9Z248 504 aaKnown RBP11.17□□□□□ -0.62
Lrrc40-201ENSMUST00000072080 Cdk11bP24788 784 aaKnown RBP11.16□□□□□ -0.62
Lrrc40-201ENSMUST00000072080 Rsf1E9PWW9 1441 aaKnown RBP11.15□□□□□ -0.62
Lrrc40-201ENSMUST00000072080 Nop58Q6DFW4 536 aaKnown RBP11.15□□□□□ -0.63
Lrrc40-201ENSMUST00000072080 ScribQ80U72 1612 aa11.1□□□□□ -0.63
Lrrc40-201ENSMUST00000072080 CenpbP27790 599 aa11.08□□□□□ -0.64
Lrrc40-201ENSMUST00000072080 Esf1Q3V1V3 845 aaKnown RBP11.07□□□□□ -0.64
Lrrc40-201ENSMUST00000072080 Kdm5dQ62240 1548 aa11.06□□□□□ -0.64
Lrrc40-201ENSMUST00000072080 Myt1lP97500 1187 aa11.03□□□□□ -0.64
Lrrc40-201ENSMUST00000072080 Ccdc88bQ4QRL3 1481 aa11.03□□□□□ -0.64
Lrrc40-201ENSMUST00000072080 ClspnQ80YR7 1315 aa11.02□□□□□ -0.65
Lrrc40-201ENSMUST00000072080 Aplp2Q06335 707 aa11.01□□□□□ -0.65
Lrrc40-201ENSMUST00000072080 TonslQ6NZL6 1363 aa10.93□□□□□ -0.66
Lrrc40-201ENSMUST00000072080 Smarca2Q6DIC0 1577 aa10.93□□□□□ -0.66
Lrrc40-201ENSMUST00000072080 Myt1Q8CFC2 1127 aa10.9□□□□□ -0.67
Lrrc40-201ENSMUST00000072080 NacadQ5SWP3 1504 aa10.89□□□□□ -0.67
Lrrc40-201ENSMUST00000072080 Brd4Q9ESU6 1400 aaKnown RBP10.87□□□□□ -0.67
Lrrc40-201ENSMUST00000072080 Golga3P55937 1487 aa10.87□□□□□ -0.67
Lrrc40-201ENSMUST00000072080 Mapk8ip2Q9ERE9 830 aa10.86□□□□□ -0.67
Lrrc40-201ENSMUST00000072080 Plekhg3Q4VAC9 1341 aa10.86□□□□□ -0.67
Lrrc40-201ENSMUST00000072080 Npm2Q80W85 207 aa10.84□□□□□ -0.67
Lrrc40-201ENSMUST00000072080 SafbD3YXK2 937 aaKnown RBP10.84□□□□□ -0.67
Lrrc40-201ENSMUST00000072080 Ap3b1Q9Z1T1 1105 aa10.82□□□□□ -0.68
Lrrc40-201ENSMUST00000072080 Eid3Q3V124 375 aa10.82□□□□□ -0.68
Lrrc40-201ENSMUST00000072080 Fam71e1A1L3C1 212 aa10.8□□□□□ -0.68
Lrrc40-201ENSMUST00000072080 Cecr2E9Q2Z1 1453 aa10.79□□□□□ -0.68
Lrrc40-201ENSMUST00000072080 Hnrnpul2Q00PI9 745 aaKnown RBP10.79□□□□□ -0.68
Lrrc40-201ENSMUST00000072080 DiexfQ8BTT6 772 aaKnown RBP10.75□□□□□ -0.69
Lrrc40-201ENSMUST00000072080 Crybg2B7ZCC2 1516 aa10.75□□□□□ -0.69
Lrrc40-201ENSMUST00000072080 Synj1Q8CHC4 1574 aa10.7□□□□□ -0.7
Lrrc40-201ENSMUST00000072080 Clip1Q922J3 1391 aa10.68□□□□□ -0.7
Lrrc40-201ENSMUST00000072080 Tnnt3Q9QZ47 272 aa10.68□□□□□ -0.7
Lrrc40-201ENSMUST00000072080 Bcl11aQ9QYE3 773 aa10.65□□□□□ -0.7
Lrrc40-201ENSMUST00000072080 Slc24a1Q91WD8 1130 aa10.64□□□□□ -0.71
Lrrc40-201ENSMUST00000072080 Sycp2Q9CUU3 1500 aa10.63□□□□□ -0.71
Lrrc40-201ENSMUST00000072080 Cep162Q6ZQ06 1403 aa10.62□□□□□ -0.71
Lrrc40-201ENSMUST00000072080 Rapgef2Q8CHG7 1496 aa10.6□□□□□ -0.71
Lrrc40-201ENSMUST00000072080 NclP09405 707 aaKnown RBP10.6□□□□□ -0.71
Lrrc40-201ENSMUST00000072080 CftrP26361 1476 aa10.6□□□□□ -0.71
Lrrc40-201ENSMUST00000072080 Fam50aQ9WV03 339 aaKnown RBP10.56□□□□□ -0.72
Lrrc40-201ENSMUST00000072080 Anp32aO35381 247 aa10.56□□□□□ -0.72
Lrrc40-201ENSMUST00000072080 Ifnlr1Q8CGK5 535 aa10.53□□□□□ -0.72
Lrrc40-201ENSMUST00000072080 Il27Q8K3I6 234 aa10.53□□□□□ -0.72
Lrrc40-201ENSMUST00000072080 Cc2d2aQ8CFW7 1633 aa10.53□□□□□ -0.72
Lrrc40-201ENSMUST00000072080 Stra8P70278 393 aa10.52□□□□□ -0.73
Lrrc40-201ENSMUST00000072080 Ncapd3Q6ZQK0 1506 aa10.49□□□□□ -0.73
Lrrc40-201ENSMUST00000072080 Calr4Q3TQS0 420 aa10.49□□□□□ -0.73
Lrrc40-201ENSMUST00000072080 Top2bQ64511 1612 aa10.49□□□□□ -0.73
Lrrc40-201ENSMUST00000072080 Eif5bQ05D44 1216 aaKnown RBP10.48□□□□□ -0.73
Lrrc40-201ENSMUST00000072080 Nolc1E9Q5C9 702 aaKnown RBP10.48□□□□□ -0.73
Lrrc40-201ENSMUST00000072080 Znf710Q3U288 666 aa10.48□□□□□ -0.73
Lrrc40-201ENSMUST00000072080 Ttbk1Q6PCN3 1308 aa10.46□□□□□ -0.73
Lrrc40-201ENSMUST00000072080 Ube2uB1AUC4 352 aa10.46□□□□□ -0.74
Lrrc40-201ENSMUST00000072080 Fmn1Q05860 1466 aa10.46□□□□□ -0.74
Lrrc40-201ENSMUST00000072080 Lmod2Q3UHZ5 550 aa10.46□□□□□ -0.74
Lrrc40-201ENSMUST00000072080 PrkcshO08795 521 aa10.43□□□□□ -0.74
Lrrc40-201ENSMUST00000072080 Top2aQ01320 1528 aaKnown RBP10.42□□□□□ -0.74
Lrrc40-201ENSMUST00000072080 Pelp1Q9DBD5 1123 aaKnown RBP10.42□□□□□ -0.74
Lrrc40-201ENSMUST00000072080 Ppp4r2Q0VGB7 417 aa10.41□□□□□ -0.74
Lrrc40-201ENSMUST00000072080 Setd5Q5XJV7 1441 aa10.41□□□□□ -0.74
Lrrc40-201ENSMUST00000072080 Rpap1Q80TE0 1409 aa10.4□□□□□ -0.74
Lrrc40-201ENSMUST00000072080 Hspa5P20029 655 aaKnown RBP10.39□□□□□ -0.75
Lrrc40-201ENSMUST00000072080 Cttnbp2B9EJA2 1648 aa10.39□□□□□ -0.75
Lrrc40-201ENSMUST00000072080 Eea1Q8BL66 1411 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms