RNA–Protein interactions for RNA: ENSMUST00000059462.11

Chmp3-201, Transcript of Charged multivesicular body protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp3, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp3-201ENSMUST00000059462 Rpgrip1Q9EPQ2 1331 aa20.35■□□□□ 0.85
Chmp3-201ENSMUST00000059462 NischQ80TM9 1593 aa20.35■□□□□ 0.85
Chmp3-201ENSMUST00000059462 Rhox8Q6VSS7 320 aa19.95■□□□□ 0.78
Chmp3-201ENSMUST00000059462 Rtl1Q7M732 1744 aa19.92■□□□□ 0.78
Chmp3-201ENSMUST00000059462 Ccdc180J3QNE4 1664 aa19.82■□□□□ 0.76
Chmp3-201ENSMUST00000059462 Acin1Q9JIX8 1338 aaKnown RBP19.77■□□□□ 0.76
Chmp3-201ENSMUST00000059462 Abcc9P70170 1546 aa19.73■□□□□ 0.75
Chmp3-201ENSMUST00000059462 Pcgf6Q99NA9 353 aa19.54■□□□□ 0.72
Chmp3-201ENSMUST00000059462 Ehmt2Q9Z148 1263 aaKnown RBP19.51■□□□□ 0.71
Chmp3-201ENSMUST00000059462 Gm35339A0A140LHH9 1649 aa19.41■□□□□ 0.7
Chmp3-201ENSMUST00000059462 DiexfQ8BTT6 772 aaKnown RBP19.25■□□□□ 0.67
Chmp3-201ENSMUST00000059462 Zcchc6Q5BLK4 1491 aaKnown RBP19.12■□□□□ 0.65
Chmp3-201ENSMUST00000059462 Abcc8B2RUS7 1588 aa19.06■□□□□ 0.64
Chmp3-201ENSMUST00000059462 Dcaf1Q80TR8 1506 aa19.02■□□□□ 0.64
Chmp3-201ENSMUST00000059462 Supt5hO55201 1082 aaKnown RBP18.99■□□□□ 0.63
Chmp3-201ENSMUST00000059462 Ube2uB1AUC4 352 aa18.94■□□□□ 0.62
Chmp3-201ENSMUST00000059462 Neurod1Q60867 357 aa18.89■□□□□ 0.61
Chmp3-201ENSMUST00000059462 Trim41Q5NCC3 630 aa18.87■□□□□ 0.61
Chmp3-201ENSMUST00000059462 HrcG5E8J6 738 aa18.81■□□□□ 0.6
Chmp3-201ENSMUST00000059462 Las1lA2BE28 776 aaKnown RBP18.61■□□□□ 0.57
Chmp3-201ENSMUST00000059462 CatipB9EKE5 520 aa18.54■□□□□ 0.56
Chmp3-201ENSMUST00000059462 Zeb1Q64318 1117 aa18.45■□□□□ 0.54
Chmp3-201ENSMUST00000059462 Ccdc136Q3TVA9 1136 aa18.44■□□□□ 0.54
Chmp3-201ENSMUST00000059462 1700123L14RikQ3V2K7 440 aa18.43■□□□□ 0.54
Chmp3-201ENSMUST00000059462 Myt1Q8CFC2 1127 aa18.32■□□□□ 0.52
Chmp3-201ENSMUST00000059462 Cngb1E1AZ71 1325 aa18.31■□□□□ 0.52
Chmp3-201ENSMUST00000059462 Csrnp3P59055 597 aa18.3■□□□□ 0.52
Chmp3-201ENSMUST00000059462 Sall2Q9QX96 1004 aa18.24■□□□□ 0.51
Chmp3-201ENSMUST00000059462 Anks4bQ8K3X6 423 aa18.22■□□□□ 0.51
Chmp3-201ENSMUST00000059462 Ttbk1Q6PCN3 1308 aa18.21■□□□□ 0.51
Chmp3-201ENSMUST00000059462 CenpbP27790 599 aa18.17■□□□□ 0.5
Chmp3-201ENSMUST00000059462 NefmP08553 848 aa18.1■□□□□ 0.49
Chmp3-201ENSMUST00000059462 Amer1Q7TS75 1132 aa18.06■□□□□ 0.48
Chmp3-201ENSMUST00000059462 Cep164Q5DU05 1446 aa18.04■□□□□ 0.48
Chmp3-201ENSMUST00000059462 Mier1Q5UAK0 511 aa18■□□□□ 0.47
Chmp3-201ENSMUST00000059462 Aplp2Q06335 707 aa17.95■□□□□ 0.46
Chmp3-201ENSMUST00000059462 Rb1cc1Q9ESK9 1588 aa17.91■□□□□ 0.46
Chmp3-201ENSMUST00000059462 Plppr3Q7TPB0 716 aa17.89■□□□□ 0.45
Chmp3-201ENSMUST00000059462 Gm38655A0A286YDK6 273 aa17.86■□□□□ 0.45
Chmp3-201ENSMUST00000059462 Wdr66E9Q743 1299 aa17.85■□□□□ 0.45
Chmp3-201ENSMUST00000059462 Cdk11bP24788 784 aaKnown RBP17.85■□□□□ 0.45
Chmp3-201ENSMUST00000059462 Gab3Q8BSM5 595 aa17.8■□□□□ 0.44
Chmp3-201ENSMUST00000059462 Nop58Q6DFW4 536 aaKnown RBP17.79■□□□□ 0.44
Chmp3-201ENSMUST00000059462 Aebp2Q9Z248 504 aaKnown RBP17.78■□□□□ 0.44
Chmp3-201ENSMUST00000059462 Bcl11aQ9QYE3 773 aa17.77■□□□□ 0.44
Chmp3-201ENSMUST00000059462 Ppargc1bQ8VHJ7 1014 aa17.71■□□□□ 0.43
Chmp3-201ENSMUST00000059462 Baz1aO88379 1555 aa17.66■□□□□ 0.42
Chmp3-201ENSMUST00000059462 Chic1Q8CBW7 227 aa17.65■□□□□ 0.42
Chmp3-201ENSMUST00000059462 ClspnQ80YR7 1315 aa17.63■□□□□ 0.41
Chmp3-201ENSMUST00000059462 Rsf1E9PWW9 1441 aaKnown RBP17.59■□□□□ 0.41
Chmp3-201ENSMUST00000059462 ScribQ80U72 1612 aa17.58■□□□□ 0.4
Chmp3-201ENSMUST00000059462 ArxO35085 564 aa17.53■□□□□ 0.4
Chmp3-201ENSMUST00000059462 Fam71e1A1L3C1 212 aa17.48■□□□□ 0.39
Chmp3-201ENSMUST00000059462 UbtfP25976 765 aaKnown RBP17.47■□□□□ 0.39
Chmp3-201ENSMUST00000059462 Mapk8ip2Q9ERE9 830 aa17.4■□□□□ 0.38
Chmp3-201ENSMUST00000059462 SafbD3YXK2 937 aaKnown RBP17.37■□□□□ 0.37
Chmp3-201ENSMUST00000059462 Ccdc88bQ4QRL3 1481 aa17.36■□□□□ 0.37
Chmp3-201ENSMUST00000059462 Smarca2Q6DIC0 1577 aa17.32■□□□□ 0.36
Chmp3-201ENSMUST00000059462 Hnrnpul2Q00PI9 745 aaKnown RBP17.32■□□□□ 0.36
Chmp3-201ENSMUST00000059462 TonslQ6NZL6 1363 aa17.3■□□□□ 0.36
Chmp3-201ENSMUST00000059462 PrkcshO08795 521 aa17.3■□□□□ 0.36
Chmp3-201ENSMUST00000059462 Kdm5dQ62240 1548 aa17.29■□□□□ 0.36
Chmp3-201ENSMUST00000059462 Ifnlr1Q8CGK5 535 aa17.2■□□□□ 0.34
Chmp3-201ENSMUST00000059462 Tnnt3Q9QZ47 272 aa17.17■□□□□ 0.34
Chmp3-201ENSMUST00000059462 Ap3b1Q9Z1T1 1105 aa17.14■□□□□ 0.33
Chmp3-201ENSMUST00000059462 Golga3P55937 1487 aa17.1■□□□□ 0.33
Chmp3-201ENSMUST00000059462 Anp32aO35381 247 aa17.02■□□□□ 0.31
Chmp3-201ENSMUST00000059462 Crybg2B7ZCC2 1516 aa17.01■□□□□ 0.31
Chmp3-201ENSMUST00000059462 Brd4Q9ESU6 1400 aaKnown RBP17■□□□□ 0.31
Chmp3-201ENSMUST00000059462 Gtf3c5Q8R2T8 520 aa17■□□□□ 0.31
Chmp3-201ENSMUST00000059462 NacadQ5SWP3 1504 aa16.99■□□□□ 0.31
Chmp3-201ENSMUST00000059462 Myt1lP97500 1187 aa16.94■□□□□ 0.3
Chmp3-201ENSMUST00000059462 BccipQ9CWI3 316 aa16.92■□□□□ 0.3
Chmp3-201ENSMUST00000059462 Nolc1E9Q5C9 702 aaKnown RBP16.88■□□□□ 0.29
Chmp3-201ENSMUST00000059462 Znf710Q3U288 666 aa16.87■□□□□ 0.29
Chmp3-201ENSMUST00000059462 Esf1Q3V1V3 845 aaKnown RBP16.87■□□□□ 0.29
Chmp3-201ENSMUST00000059462 Plekhg3Q4VAC9 1341 aa16.86■□□□□ 0.29
Chmp3-201ENSMUST00000059462 Eid3Q3V124 375 aa16.86■□□□□ 0.29
Chmp3-201ENSMUST00000059462 Rapgef2Q8CHG7 1496 aa16.85■□□□□ 0.29
Chmp3-201ENSMUST00000059462 Rtl5Q5DTT4 599 aa16.85■□□□□ 0.29
Chmp3-201ENSMUST00000059462 Cecr2E9Q2Z1 1453 aa16.83■□□□□ 0.29
Chmp3-201ENSMUST00000059462 Synj1Q8CHC4 1574 aa16.82■□□□□ 0.28
Chmp3-201ENSMUST00000059462 Ncapd3Q6ZQK0 1506 aa16.8■□□□□ 0.28
Chmp3-201ENSMUST00000059462 Calr4Q3TQS0 420 aa16.76■□□□□ 0.27
Chmp3-201ENSMUST00000059462 Pelp1Q9DBD5 1123 aaKnown RBP16.76■□□□□ 0.27
Chmp3-201ENSMUST00000059462 Cep162Q6ZQ06 1403 aa16.75■□□□□ 0.27
Chmp3-201ENSMUST00000059462 Stra8P70278 393 aa16.74■□□□□ 0.27
Chmp3-201ENSMUST00000059462 Rpap1Q80TE0 1409 aa16.73■□□□□ 0.27
Chmp3-201ENSMUST00000059462 Top2bQ64511 1612 aa16.73■□□□□ 0.27
Chmp3-201ENSMUST00000059462 Supt16hQ920B9 1047 aa16.73■□□□□ 0.27
Chmp3-201ENSMUST00000059462 Pknox2Q8BG99 474 aa16.72■□□□□ 0.27
Chmp3-201ENSMUST00000059462 Clip1Q922J3 1391 aa16.71■□□□□ 0.27
Chmp3-201ENSMUST00000059462 TimelessQ9R1X4 1197 aa16.69■□□□□ 0.26
Chmp3-201ENSMUST00000059462 Cc2d2aQ8CFW7 1633 aa16.68■□□□□ 0.26
Chmp3-201ENSMUST00000059462 Sycp2Q9CUU3 1500 aa16.65■□□□□ 0.26
Chmp3-201ENSMUST00000059462 Hdac5Q9Z2V6 1113 aa16.65■□□□□ 0.26
Chmp3-201ENSMUST00000059462 Npm2Q80W85 207 aa16.63■□□□□ 0.25
Chmp3-201ENSMUST00000059462 CftrP26361 1476 aa16.6■□□□□ 0.25
Chmp3-201ENSMUST00000059462 Rsph4aQ8BYM7 716 aa16.59■□□□□ 0.25
Chmp3-201ENSMUST00000059462 Ppp4r2Q0VGB7 417 aa16.59■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms