RNA–Protein interactions for RNA: ENSMUST00000057612.8

Ssc5d-201, Transcript of Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssc5d, Length 4,348 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc5d-201ENSMUST00000057612 Rhox8Q6VSS7 320 aa24.09■■□□□ 1.45
Ssc5d-201ENSMUST00000057612 NischQ80TM9 1593 aa23.5■■□□□ 1.35
Ssc5d-201ENSMUST00000057612 Rpgrip1Q9EPQ2 1331 aa22.27■■□□□ 1.16
Ssc5d-201ENSMUST00000057612 Abcc9P70170 1546 aa22.26■■□□□ 1.15
Ssc5d-201ENSMUST00000057612 Abcc8B2RUS7 1588 aa21.95■■□□□ 1.1
Ssc5d-201ENSMUST00000057612 Ccdc136Q3TVA9 1136 aa21.93■■□□□ 1.1
Ssc5d-201ENSMUST00000057612 Ehmt2Q9Z148 1263 aaKnown RBP21.92■■□□□ 1.1
Ssc5d-201ENSMUST00000057612 Gm35339A0A140LHH9 1649 aa21.73■■□□□ 1.07
Ssc5d-201ENSMUST00000057612 Esf1Q3V1V3 845 aaKnown RBP21.39■■□□□ 1.02
Ssc5d-201ENSMUST00000057612 Cngb1E1AZ71 1325 aa21.32■■□□□ 1
Ssc5d-201ENSMUST00000057612 Trim41Q5NCC3 630 aa21.31■■□□□ 1
Ssc5d-201ENSMUST00000057612 Las1lA2BE28 776 aaKnown RBP21.23■□□□□ 0.99
Ssc5d-201ENSMUST00000057612 Zcchc6Q5BLK4 1491 aaKnown RBP21.06■□□□□ 0.96
Ssc5d-201ENSMUST00000057612 Zeb1Q64318 1117 aa20.97■□□□□ 0.95
Ssc5d-201ENSMUST00000057612 Acin1Q9JIX8 1338 aaKnown RBP20.94■□□□□ 0.94
Ssc5d-201ENSMUST00000057612 Gab3Q8BSM5 595 aa20.93■□□□□ 0.94
Ssc5d-201ENSMUST00000057612 Rtl1Q7M732 1744 aa20.93■□□□□ 0.94
Ssc5d-201ENSMUST00000057612 Wdr66E9Q743 1299 aa20.84■□□□□ 0.93
Ssc5d-201ENSMUST00000057612 Ccdc180J3QNE4 1664 aa20.83■□□□□ 0.93
Ssc5d-201ENSMUST00000057612 Pcgf6Q99NA9 353 aa20.6■□□□□ 0.89
Ssc5d-201ENSMUST00000057612 Rb1cc1Q9ESK9 1588 aa20.6■□□□□ 0.89
Ssc5d-201ENSMUST00000057612 Npm2Q80W85 207 aa20.59■□□□□ 0.89
Ssc5d-201ENSMUST00000057612 NacadQ5SWP3 1504 aa20.53■□□□□ 0.88
Ssc5d-201ENSMUST00000057612 Myt1lP97500 1187 aa20.49■□□□□ 0.87
Ssc5d-201ENSMUST00000057612 HrcG5E8J6 738 aa20.42■□□□□ 0.86
Ssc5d-201ENSMUST00000057612 Il27Q8K3I6 234 aa20.41■□□□□ 0.86
Ssc5d-201ENSMUST00000057612 Kdm5dQ62240 1548 aa20.35■□□□□ 0.85
Ssc5d-201ENSMUST00000057612 CenpbP27790 599 aa20.34■□□□□ 0.85
Ssc5d-201ENSMUST00000057612 NefmP08553 848 aa20.2■□□□□ 0.82
Ssc5d-201ENSMUST00000057612 Pelp1Q9DBD5 1123 aaKnown RBP20.18■□□□□ 0.82
Ssc5d-201ENSMUST00000057612 Baz1aO88379 1555 aa20.18■□□□□ 0.82
Ssc5d-201ENSMUST00000057612 Dcaf1Q80TR8 1506 aa20.15■□□□□ 0.82
Ssc5d-201ENSMUST00000057612 ScribQ80U72 1612 aa20.14■□□□□ 0.81
Ssc5d-201ENSMUST00000057612 Supt5hO55201 1082 aaKnown RBP20.13■□□□□ 0.81
Ssc5d-201ENSMUST00000057612 Brd4Q9ESU6 1400 aaKnown RBP20.06■□□□□ 0.8
Ssc5d-201ENSMUST00000057612 UbtfP25976 765 aaKnown RBP19.98■□□□□ 0.79
Ssc5d-201ENSMUST00000057612 Cdk11bP24788 784 aaKnown RBP19.94■□□□□ 0.78
Ssc5d-201ENSMUST00000057612 Ube2uB1AUC4 352 aa19.88■□□□□ 0.77
Ssc5d-201ENSMUST00000057612 Chic1Q8CBW7 227 aa19.83■□□□□ 0.76
Ssc5d-201ENSMUST00000057612 Sycp2Q9CUU3 1500 aa19.82■□□□□ 0.76
Ssc5d-201ENSMUST00000057612 Npm1Q61937 292 aaKnown RBP19.81■□□□□ 0.76
Ssc5d-201ENSMUST00000057612 Myt1Q8CFC2 1127 aa19.81■□□□□ 0.76
Ssc5d-201ENSMUST00000057612 Ppargc1bQ8VHJ7 1014 aa19.79■□□□□ 0.76
Ssc5d-201ENSMUST00000057612 Nop58Q6DFW4 536 aaKnown RBP19.78■□□□□ 0.76
Ssc5d-201ENSMUST00000057612 Ap3b1Q9Z1T1 1105 aa19.73■□□□□ 0.75
Ssc5d-201ENSMUST00000057612 Amer1Q7TS75 1132 aa19.7■□□□□ 0.74
Ssc5d-201ENSMUST00000057612 Ubl4bQ9CQ84 188 aa19.67■□□□□ 0.74
Ssc5d-201ENSMUST00000057612 Neurod1Q60867 357 aa19.66■□□□□ 0.74
Ssc5d-201ENSMUST00000057612 Slc24a1Q91WD8 1130 aa19.65■□□□□ 0.74
Ssc5d-201ENSMUST00000057612 Stra8P70278 393 aa19.58■□□□□ 0.73
Ssc5d-201ENSMUST00000057612 Cep164Q5DU05 1446 aa19.54■□□□□ 0.72
Ssc5d-201ENSMUST00000057612 Ttbk1Q6PCN3 1308 aa19.51■□□□□ 0.71
Ssc5d-201ENSMUST00000057612 Crybg2B7ZCC2 1516 aa19.51■□□□□ 0.71
Ssc5d-201ENSMUST00000057612 Golga3P55937 1487 aa19.48■□□□□ 0.71
Ssc5d-201ENSMUST00000057612 Mier1Q5UAK0 511 aa19.46■□□□□ 0.71
Ssc5d-201ENSMUST00000057612 Cecr2E9Q2Z1 1453 aa19.44■□□□□ 0.7
Ssc5d-201ENSMUST00000057612 Tnnt3Q9QZ47 272 aa19.4■□□□□ 0.7
Ssc5d-201ENSMUST00000057612 Ercc6F8VPZ5 1481 aa19.39■□□□□ 0.69
Ssc5d-201ENSMUST00000057612 Pds5bQ4VA53 1446 aaKnown RBP19.39■□□□□ 0.69
Ssc5d-201ENSMUST00000057612 Kif15Q6P9L6 1387 aa19.36■□□□□ 0.69
Ssc5d-201ENSMUST00000057612 Plekhg3Q4VAC9 1341 aa19.36■□□□□ 0.69
Ssc5d-201ENSMUST00000057612 Fam50aQ9WV03 339 aaKnown RBP19.35■□□□□ 0.69
Ssc5d-201ENSMUST00000057612 Smarca2Q6DIC0 1577 aa19.35■□□□□ 0.69
Ssc5d-201ENSMUST00000057612 Csrnp3P59055 597 aa19.34■□□□□ 0.69
Ssc5d-201ENSMUST00000057612 DiexfQ8BTT6 772 aaKnown RBP19.32■□□□□ 0.68
Ssc5d-201ENSMUST00000057612 Lmod2Q3UHZ5 550 aa19.32■□□□□ 0.68
Ssc5d-201ENSMUST00000057612 Sall2Q9QX96 1004 aa19.31■□□□□ 0.68
Ssc5d-201ENSMUST00000057612 Rsf1E9PWW9 1441 aaKnown RBP19.31■□□□□ 0.68
Ssc5d-201ENSMUST00000057612 Gm38655A0A286YDK6 273 aa19.3■□□□□ 0.68
Ssc5d-201ENSMUST00000057612 TonslQ6NZL6 1363 aa19.26■□□□□ 0.67
Ssc5d-201ENSMUST00000057612 Anks4bQ8K3X6 423 aa19.23■□□□□ 0.67
Ssc5d-201ENSMUST00000057612 CftrP26361 1476 aa19.22■□□□□ 0.67
Ssc5d-201ENSMUST00000057612 NclP09405 707 aaKnown RBP19.18■□□□□ 0.66
Ssc5d-201ENSMUST00000057612 Clip1Q922J3 1391 aa19.16■□□□□ 0.66
Ssc5d-201ENSMUST00000057612 ClspnQ80YR7 1315 aa19.16■□□□□ 0.66
Ssc5d-201ENSMUST00000057612 Eif5bQ05D44 1216 aaKnown RBP19.15■□□□□ 0.66
Ssc5d-201ENSMUST00000057612 Ccdc88bQ4QRL3 1481 aa19.14■□□□□ 0.65
Ssc5d-201ENSMUST00000057612 Atad2bE9Q166 1460 aaKnown RBP19.12■□□□□ 0.65
Ssc5d-201ENSMUST00000057612 Synj1Q8CHC4 1574 aa19.12■□□□□ 0.65
Ssc5d-201ENSMUST00000057612 4933416C03RikQ3V063 378 aa19.11■□□□□ 0.65
Ssc5d-201ENSMUST00000057612 Smarca4Q3TKT4 1613 aaKnown RBP19.07■□□□□ 0.64
Ssc5d-201ENSMUST00000057612 Aplp2Q06335 707 aa19.04■□□□□ 0.64
Ssc5d-201ENSMUST00000057612 Ccdc18Q640L5 1455 aa19.04■□□□□ 0.64
Ssc5d-201ENSMUST00000057612 NrdcQ8BHG1 1161 aa19.03■□□□□ 0.64
Ssc5d-201ENSMUST00000057612 Fkbp15Q6P9Q6 1216 aaKnown RBP19.02■□□□□ 0.64
Ssc5d-201ENSMUST00000057612 1700123L14RikQ3V2K7 440 aa19.02■□□□□ 0.63
Ssc5d-201ENSMUST00000057612 Ifnlr1Q8CGK5 535 aa19.01■□□□□ 0.63
Ssc5d-201ENSMUST00000057612 Rtl5Q5DTT4 599 aa18.97■□□□□ 0.63
Ssc5d-201ENSMUST00000057612 Anp32aO35381 247 aa18.94■□□□□ 0.62
Ssc5d-201ENSMUST00000057612 Fmn1Q05860 1466 aa18.93■□□□□ 0.62
Ssc5d-201ENSMUST00000057612 BicraF8VPZ9 1578 aa18.93■□□□□ 0.62
Ssc5d-201ENSMUST00000057612 Mapk8ip2Q9ERE9 830 aa18.91■□□□□ 0.62
Ssc5d-201ENSMUST00000057612 Iqgap2Q3UQ44 1575 aa18.89■□□□□ 0.61
Ssc5d-201ENSMUST00000057612 Setd5Q5XJV7 1441 aa18.88■□□□□ 0.61
Ssc5d-201ENSMUST00000057612 Zbtb7cQ8VCZ7 619 aa18.87■□□□□ 0.61
Ssc5d-201ENSMUST00000057612 Phldb1Q6PDH0 1371 aaKnown RBP18.87■□□□□ 0.61
Ssc5d-201ENSMUST00000057612 Cttnbp2B9EJA2 1648 aa18.87■□□□□ 0.61
Ssc5d-201ENSMUST00000057612 Cux2P70298 1426 aa18.83■□□□□ 0.6
Ssc5d-201ENSMUST00000057612 Eid3Q3V124 375 aa18.81■□□□□ 0.6
Ssc5d-201ENSMUST00000057612 BlmO88700 1416 aa18.8■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 55.2 ms