RNA–Protein interactions for RNA: ENSMUST00000053232.6

Ptp4a3-201, Transcript of Protein tyrosine phosphatase type IVA 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptp4a3, Length 3,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a3-201ENSMUST00000053232 NischQ80TM9 1593 aa28.39■■■□□ 2.13
Ptp4a3-201ENSMUST00000053232 Gm35339A0A140LHH9 1649 aa27.29■■□□□ 1.96
Ptp4a3-201ENSMUST00000053232 Abcc9P70170 1546 aa27.24■■□□□ 1.95
Ptp4a3-201ENSMUST00000053232 Rhox8Q6VSS7 320 aa27.16■■□□□ 1.94
Ptp4a3-201ENSMUST00000053232 Abcc8B2RUS7 1588 aa26.91■■□□□ 1.9
Ptp4a3-201ENSMUST00000053232 Ehmt2Q9Z148 1263 aaKnown RBP25.37■■□□□ 1.65
Ptp4a3-201ENSMUST00000053232 ScribQ80U72 1612 aa25.26■■□□□ 1.64
Ptp4a3-201ENSMUST00000053232 Ccdc136Q3TVA9 1136 aa25.22■■□□□ 1.63
Ptp4a3-201ENSMUST00000053232 Rpgrip1Q9EPQ2 1331 aa25.12■■□□□ 1.61
Ptp4a3-201ENSMUST00000053232 Kdm5dQ62240 1548 aa24.89■■□□□ 1.57
Ptp4a3-201ENSMUST00000053232 Rb1cc1Q9ESK9 1588 aa24.84■■□□□ 1.57
Ptp4a3-201ENSMUST00000053232 NacadQ5SWP3 1504 aa24.7■■□□□ 1.54
Ptp4a3-201ENSMUST00000053232 Zcchc6Q5BLK4 1491 aaKnown RBP24.68■■□□□ 1.54
Ptp4a3-201ENSMUST00000053232 Pcgf6Q99NA9 353 aa24.59■■□□□ 1.53
Ptp4a3-201ENSMUST00000053232 Dcaf1Q80TR8 1506 aa24.56■■□□□ 1.52
Ptp4a3-201ENSMUST00000053232 Rtl1Q7M732 1744 aa24.43■■□□□ 1.5
Ptp4a3-201ENSMUST00000053232 Baz1aO88379 1555 aa24.38■■□□□ 1.49
Ptp4a3-201ENSMUST00000053232 Acin1Q9JIX8 1338 aaKnown RBP24.29■■□□□ 1.48
Ptp4a3-201ENSMUST00000053232 Ccdc180J3QNE4 1664 aa24.23■■□□□ 1.47
Ptp4a3-201ENSMUST00000053232 Trim41Q5NCC3 630 aa24.18■■□□□ 1.46
Ptp4a3-201ENSMUST00000053232 Cngb1E1AZ71 1325 aa24.15■■□□□ 1.46
Ptp4a3-201ENSMUST00000053232 Sycp2Q9CUU3 1500 aa24.14■■□□□ 1.46
Ptp4a3-201ENSMUST00000053232 Esf1Q3V1V3 845 aaKnown RBP24.05■■□□□ 1.44
Ptp4a3-201ENSMUST00000053232 Las1lA2BE28 776 aaKnown RBP23.98■■□□□ 1.43
Ptp4a3-201ENSMUST00000053232 Supt5hO55201 1082 aaKnown RBP23.95■■□□□ 1.42
Ptp4a3-201ENSMUST00000053232 Zeb1Q64318 1117 aa23.86■■□□□ 1.41
Ptp4a3-201ENSMUST00000053232 Neurod1Q60867 357 aa23.85■■□□□ 1.41
Ptp4a3-201ENSMUST00000053232 Gab3Q8BSM5 595 aa23.78■■□□□ 1.4
Ptp4a3-201ENSMUST00000053232 Cecr2E9Q2Z1 1453 aa23.74■■□□□ 1.39
Ptp4a3-201ENSMUST00000053232 Smarca2Q6DIC0 1577 aa23.68■■□□□ 1.38
Ptp4a3-201ENSMUST00000053232 Crybg2B7ZCC2 1516 aa23.66■■□□□ 1.38
Ptp4a3-201ENSMUST00000053232 BicraF8VPZ9 1578 aa23.63■■□□□ 1.37
Ptp4a3-201ENSMUST00000053232 HrcG5E8J6 738 aa23.59■■□□□ 1.37
Ptp4a3-201ENSMUST00000053232 CenpbP27790 599 aa23.52■■□□□ 1.36
Ptp4a3-201ENSMUST00000053232 Brd4Q9ESU6 1400 aaKnown RBP23.49■■□□□ 1.35
Ptp4a3-201ENSMUST00000053232 DiexfQ8BTT6 772 aaKnown RBP23.49■■□□□ 1.35
Ptp4a3-201ENSMUST00000053232 Chic1Q8CBW7 227 aa23.49■■□□□ 1.35
Ptp4a3-201ENSMUST00000053232 Gm38655A0A286YDK6 273 aa23.4■■□□□ 1.34
Ptp4a3-201ENSMUST00000053232 Csrnp3P59055 597 aa23.34■■□□□ 1.33
Ptp4a3-201ENSMUST00000053232 1700123L14RikQ3V2K7 440 aa23.32■■□□□ 1.32
Ptp4a3-201ENSMUST00000053232 Synj1Q8CHC4 1574 aa23.26■■□□□ 1.31
Ptp4a3-201ENSMUST00000053232 Il27Q8K3I6 234 aa23.2■■□□□ 1.31
Ptp4a3-201ENSMUST00000053232 Wdr66E9Q743 1299 aa23.18■■□□□ 1.3
Ptp4a3-201ENSMUST00000053232 CftrP26361 1476 aa23.17■■□□□ 1.3
Ptp4a3-201ENSMUST00000053232 Ppargc1bQ8VHJ7 1014 aa23.13■■□□□ 1.29
Ptp4a3-201ENSMUST00000053232 Rsf1E9PWW9 1441 aaKnown RBP23.11■■□□□ 1.29
Ptp4a3-201ENSMUST00000053232 Golga3P55937 1487 aa23.08■■□□□ 1.28
Ptp4a3-201ENSMUST00000053232 Myt1lP97500 1187 aa23.07■■□□□ 1.28
Ptp4a3-201ENSMUST00000053232 Ccdc88bQ4QRL3 1481 aa23.05■■□□□ 1.28
Ptp4a3-201ENSMUST00000053232 Smarca4Q3TKT4 1613 aaKnown RBP23.03■■□□□ 1.28
Ptp4a3-201ENSMUST00000053232 Npm2Q80W85 207 aa23■■□□□ 1.27
Ptp4a3-201ENSMUST00000053232 Cep164Q5DU05 1446 aa22.96■■□□□ 1.27
Ptp4a3-201ENSMUST00000053232 Pds5bQ4VA53 1446 aaKnown RBP22.92■■□□□ 1.26
Ptp4a3-201ENSMUST00000053232 Atad2bE9Q166 1460 aaKnown RBP22.88■■□□□ 1.25
Ptp4a3-201ENSMUST00000053232 Myt1Q8CFC2 1127 aa22.86■■□□□ 1.25
Ptp4a3-201ENSMUST00000053232 Iqgap2Q3UQ44 1575 aa22.86■■□□□ 1.25
Ptp4a3-201ENSMUST00000053232 Cttnbp2B9EJA2 1648 aa22.81■■□□□ 1.24
Ptp4a3-201ENSMUST00000053232 Bcl11aQ9QYE3 773 aa22.8■■□□□ 1.24
Ptp4a3-201ENSMUST00000053232 Sall2Q9QX96 1004 aa22.77■■□□□ 1.24
Ptp4a3-201ENSMUST00000053232 Ubl4bQ9CQ84 188 aa22.72■■□□□ 1.23
Ptp4a3-201ENSMUST00000053232 Ercc6F8VPZ5 1481 aa22.65■■□□□ 1.22
Ptp4a3-201ENSMUST00000053232 Cdk11bP24788 784 aaKnown RBP22.63■■□□□ 1.21
Ptp4a3-201ENSMUST00000053232 Kif15Q6P9L6 1387 aa22.63■■□□□ 1.21
Ptp4a3-201ENSMUST00000053232 Ttbk1Q6PCN3 1308 aa22.63■■□□□ 1.21
Ptp4a3-201ENSMUST00000053232 Anks4bQ8K3X6 423 aa22.62■■□□□ 1.21
Ptp4a3-201ENSMUST00000053232 Amer1Q7TS75 1132 aa22.59■■□□□ 1.21
Ptp4a3-201ENSMUST00000053232 Cc2d2aQ8CFW7 1633 aa22.57■■□□□ 1.2
Ptp4a3-201ENSMUST00000053232 Frmpd1A2AKB4 1549 aa22.54■■□□□ 1.2
Ptp4a3-201ENSMUST00000053232 Nop58Q6DFW4 536 aaKnown RBP22.54■■□□□ 1.2
Ptp4a3-201ENSMUST00000053232 Npm1Q61937 292 aaKnown RBP22.52■■□□□ 1.2
Ptp4a3-201ENSMUST00000053232 Ap3b1Q9Z1T1 1105 aa22.5■■□□□ 1.19
Ptp4a3-201ENSMUST00000053232 UbtfP25976 765 aaKnown RBP22.5■■□□□ 1.19
Ptp4a3-201ENSMUST00000053232 Dnajc5bQ9CQ94 199 aa22.5■■□□□ 1.19
Ptp4a3-201ENSMUST00000053232 PrkcshO08795 521 aa22.49■■□□□ 1.19
Ptp4a3-201ENSMUST00000053232 Mapk8ip2Q9ERE9 830 aa22.45■■□□□ 1.19
Ptp4a3-201ENSMUST00000053232 Fmn1Q05860 1466 aa22.45■■□□□ 1.18
Ptp4a3-201ENSMUST00000053232 Top2bQ64511 1612 aa22.42■■□□□ 1.18
Ptp4a3-201ENSMUST00000053232 Aplp2Q06335 707 aa22.4■■□□□ 1.18
Ptp4a3-201ENSMUST00000053232 Wdr62Q3U3T8 1523 aa22.35■■□□□ 1.17
Ptp4a3-201ENSMUST00000053232 Fam71e1A1L3C1 212 aa22.3■■□□□ 1.16
Ptp4a3-201ENSMUST00000053232 Plekhg3Q4VAC9 1341 aa22.29■■□□□ 1.16
Ptp4a3-201ENSMUST00000053232 NefmP08553 848 aa22.28■■□□□ 1.16
Ptp4a3-201ENSMUST00000053232 Phldb1Q6PDH0 1371 aaKnown RBP22.28■■□□□ 1.16
Ptp4a3-201ENSMUST00000053232 Ifnlr1Q8CGK5 535 aa22.27■■□□□ 1.16
Ptp4a3-201ENSMUST00000053232 Rapgef2Q8CHG7 1496 aa22.22■■□□□ 1.15
Ptp4a3-201ENSMUST00000053232 Cux2P70298 1426 aa22.22■■□□□ 1.15
Ptp4a3-201ENSMUST00000053232 Mier1Q5UAK0 511 aa22.17■■□□□ 1.14
Ptp4a3-201ENSMUST00000053232 Cep162Q6ZQ06 1403 aa22.14■■□□□ 1.13
Ptp4a3-201ENSMUST00000053232 Top2aQ01320 1528 aaKnown RBP22.12■■□□□ 1.13
Ptp4a3-201ENSMUST00000053232 Ccdc18Q640L5 1455 aa22.11■■□□□ 1.13
Ptp4a3-201ENSMUST00000053232 SafbD3YXK2 937 aaKnown RBP22.08■■□□□ 1.12
Ptp4a3-201ENSMUST00000053232 Clip1Q922J3 1391 aa22.07■■□□□ 1.12
Ptp4a3-201ENSMUST00000053232 PtprkP35822 1457 aa22.06■■□□□ 1.12
Ptp4a3-201ENSMUST00000053232 Lmod2Q3UHZ5 550 aa22.04■■□□□ 1.12
Ptp4a3-201ENSMUST00000053232 Aebp2Q9Z248 504 aaKnown RBP22.02■■□□□ 1.12
Ptp4a3-201ENSMUST00000053232 Thoc2B1AZI6 1594 aaKnown RBP21.94■■□□□ 1.1
Ptp4a3-201ENSMUST00000053232 Lamc3Q9R0B6 1581 aa21.93■■□□□ 1.1
Ptp4a3-201ENSMUST00000053232 Unc13aQ4KUS2 1712 aa21.88■■□□□ 1.09
Ptp4a3-201ENSMUST00000053232 LrpprcQ6PB66 1392 aaKnown RBP21.87■■□□□ 1.09
Ptp4a3-201ENSMUST00000053232 Setd5Q5XJV7 1441 aa21.85■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms