RNA–Protein interactions for RNA: ENSMUST00000052904.10

Ccdc169-201, Transcript of Coiled-coil domain-containing protein 169, mousemouse

TSL 1 (best) BASIC

Gene Ccdc169, Length 2,889 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc169-201ENSMUST00000052904 NischQ80TM9 1593 aa13.92□□□□□ -0.18
Ccdc169-201ENSMUST00000052904 Rhox8Q6VSS7 320 aa13.62□□□□□ -0.23
Ccdc169-201ENSMUST00000052904 Rpgrip1Q9EPQ2 1331 aa13.57□□□□□ -0.24
Ccdc169-201ENSMUST00000052904 Abcc9P70170 1546 aa13.49□□□□□ -0.25
Ccdc169-201ENSMUST00000052904 Rtl1Q7M732 1744 aa13.48□□□□□ -0.25
Ccdc169-201ENSMUST00000052904 Ccdc180J3QNE4 1664 aa13.38□□□□□ -0.27
Ccdc169-201ENSMUST00000052904 Gm35339A0A140LHH9 1649 aa13.31□□□□□ -0.28
Ccdc169-201ENSMUST00000052904 Acin1Q9JIX8 1338 aaKnown RBP13.21□□□□□ -0.3
Ccdc169-201ENSMUST00000052904 Ehmt2Q9Z148 1263 aaKnown RBP13.11□□□□□ -0.31
Ccdc169-201ENSMUST00000052904 Abcc8B2RUS7 1588 aa13.05□□□□□ -0.32
Ccdc169-201ENSMUST00000052904 Pcgf6Q99NA9 353 aa12.98□□□□□ -0.33
Ccdc169-201ENSMUST00000052904 Zcchc6Q5BLK4 1491 aaKnown RBP12.9□□□□□ -0.34
Ccdc169-201ENSMUST00000052904 Dcaf1Q80TR8 1506 aa12.77□□□□□ -0.37
Ccdc169-201ENSMUST00000052904 HrcG5E8J6 738 aa12.71□□□□□ -0.37
Ccdc169-201ENSMUST00000052904 Supt5hO55201 1082 aaKnown RBP12.65□□□□□ -0.38
Ccdc169-201ENSMUST00000052904 Ccdc136Q3TVA9 1136 aa12.56□□□□□ -0.4
Ccdc169-201ENSMUST00000052904 Trim41Q5NCC3 630 aa12.54□□□□□ -0.4
Ccdc169-201ENSMUST00000052904 Neurod1Q60867 357 aa12.52□□□□□ -0.41
Ccdc169-201ENSMUST00000052904 Zeb1Q64318 1117 aa12.38□□□□□ -0.43
Ccdc169-201ENSMUST00000052904 Las1lA2BE28 776 aaKnown RBP12.37□□□□□ -0.43
Ccdc169-201ENSMUST00000052904 Cngb1E1AZ71 1325 aa12.27□□□□□ -0.45
Ccdc169-201ENSMUST00000052904 Rb1cc1Q9ESK9 1588 aa12.25□□□□□ -0.45
Ccdc169-201ENSMUST00000052904 Cep164Q5DU05 1446 aa12.21□□□□□ -0.45
Ccdc169-201ENSMUST00000052904 Sall2Q9QX96 1004 aa12.19□□□□□ -0.46
Ccdc169-201ENSMUST00000052904 NefmP08553 848 aa12.18□□□□□ -0.46
Ccdc169-201ENSMUST00000052904 1700123L14RikQ3V2K7 440 aa12.17□□□□□ -0.46
Ccdc169-201ENSMUST00000052904 Csrnp3P59055 597 aa12.13□□□□□ -0.47
Ccdc169-201ENSMUST00000052904 Mier1Q5UAK0 511 aa12.11□□□□□ -0.47
Ccdc169-201ENSMUST00000052904 Gab3Q8BSM5 595 aa12.11□□□□□ -0.47
Ccdc169-201ENSMUST00000052904 Anks4bQ8K3X6 423 aa12.11□□□□□ -0.47
Ccdc169-201ENSMUST00000052904 Baz1aO88379 1555 aa12.08□□□□□ -0.48
Ccdc169-201ENSMUST00000052904 Wdr66E9Q743 1299 aa12.02□□□□□ -0.49
Ccdc169-201ENSMUST00000052904 CenpbP27790 599 aa12□□□□□ -0.49
Ccdc169-201ENSMUST00000052904 Chic1Q8CBW7 227 aa11.97□□□□□ -0.49
Ccdc169-201ENSMUST00000052904 ScribQ80U72 1612 aa11.96□□□□□ -0.49
Ccdc169-201ENSMUST00000052904 Cdk11bP24788 784 aaKnown RBP11.93□□□□□ -0.5
Ccdc169-201ENSMUST00000052904 Rsf1E9PWW9 1441 aaKnown RBP11.93□□□□□ -0.5
Ccdc169-201ENSMUST00000052904 Myt1Q8CFC2 1127 aa11.92□□□□□ -0.5
Ccdc169-201ENSMUST00000052904 Aplp2Q06335 707 aa11.91□□□□□ -0.5
Ccdc169-201ENSMUST00000052904 Nop58Q6DFW4 536 aaKnown RBP11.91□□□□□ -0.5
Ccdc169-201ENSMUST00000052904 Aebp2Q9Z248 504 aaKnown RBP11.9□□□□□ -0.5
Ccdc169-201ENSMUST00000052904 Ppargc1bQ8VHJ7 1014 aa11.88□□□□□ -0.51
Ccdc169-201ENSMUST00000052904 Kdm5dQ62240 1548 aa11.87□□□□□ -0.51
Ccdc169-201ENSMUST00000052904 Gm38655A0A286YDK6 273 aa11.87□□□□□ -0.51
Ccdc169-201ENSMUST00000052904 UbtfP25976 765 aaKnown RBP11.83□□□□□ -0.52
Ccdc169-201ENSMUST00000052904 Smarca2Q6DIC0 1577 aa11.83□□□□□ -0.52
Ccdc169-201ENSMUST00000052904 ClspnQ80YR7 1315 aa11.83□□□□□ -0.52
Ccdc169-201ENSMUST00000052904 Ccdc88bQ4QRL3 1481 aa11.78□□□□□ -0.52
Ccdc169-201ENSMUST00000052904 NacadQ5SWP3 1504 aa11.68□□□□□ -0.54
Ccdc169-201ENSMUST00000052904 TonslQ6NZL6 1363 aa11.66□□□□□ -0.54
Ccdc169-201ENSMUST00000052904 Golga3P55937 1487 aa11.66□□□□□ -0.54
Ccdc169-201ENSMUST00000052904 DiexfQ8BTT6 772 aaKnown RBP11.66□□□□□ -0.54
Ccdc169-201ENSMUST00000052904 Crybg2B7ZCC2 1516 aa11.65□□□□□ -0.55
Ccdc169-201ENSMUST00000052904 Brd4Q9ESU6 1400 aaKnown RBP11.64□□□□□ -0.55
Ccdc169-201ENSMUST00000052904 Esf1Q3V1V3 845 aaKnown RBP11.59□□□□□ -0.55
Ccdc169-201ENSMUST00000052904 Fam71e1A1L3C1 212 aa11.58□□□□□ -0.56
Ccdc169-201ENSMUST00000052904 Mapk8ip2Q9ERE9 830 aa11.57□□□□□ -0.56
Ccdc169-201ENSMUST00000052904 Myt1lP97500 1187 aa11.56□□□□□ -0.56
Ccdc169-201ENSMUST00000052904 Bcl11aQ9QYE3 773 aa11.55□□□□□ -0.56
Ccdc169-201ENSMUST00000052904 SafbD3YXK2 937 aaKnown RBP11.55□□□□□ -0.56
Ccdc169-201ENSMUST00000052904 Hnrnpul2Q00PI9 745 aaKnown RBP11.54□□□□□ -0.56
Ccdc169-201ENSMUST00000052904 Cecr2E9Q2Z1 1453 aa11.51□□□□□ -0.57
Ccdc169-201ENSMUST00000052904 Synj1Q8CHC4 1574 aa11.5□□□□□ -0.57
Ccdc169-201ENSMUST00000052904 Tnnt3Q9QZ47 272 aa11.5□□□□□ -0.57
Ccdc169-201ENSMUST00000052904 Ap3b1Q9Z1T1 1105 aa11.48□□□□□ -0.57
Ccdc169-201ENSMUST00000052904 Plekhg3Q4VAC9 1341 aa11.45□□□□□ -0.58
Ccdc169-201ENSMUST00000052904 Rapgef2Q8CHG7 1496 aa11.44□□□□□ -0.58
Ccdc169-201ENSMUST00000052904 Sycp2Q9CUU3 1500 aa11.41□□□□□ -0.58
Ccdc169-201ENSMUST00000052904 Eid3Q3V124 375 aa11.39□□□□□ -0.59
Ccdc169-201ENSMUST00000052904 Top2bQ64511 1612 aa11.39□□□□□ -0.59
Ccdc169-201ENSMUST00000052904 Npm2Q80W85 207 aa11.38□□□□□ -0.59
Ccdc169-201ENSMUST00000052904 Cep162Q6ZQ06 1403 aa11.38□□□□□ -0.59
Ccdc169-201ENSMUST00000052904 Clip1Q922J3 1391 aa11.37□□□□□ -0.59
Ccdc169-201ENSMUST00000052904 Cc2d2aQ8CFW7 1633 aa11.36□□□□□ -0.59
Ccdc169-201ENSMUST00000052904 Anp32aO35381 247 aa11.35□□□□□ -0.59
Ccdc169-201ENSMUST00000052904 CftrP26361 1476 aa11.35□□□□□ -0.59
Ccdc169-201ENSMUST00000052904 Ncapd3Q6ZQK0 1506 aa11.34□□□□□ -0.59
Ccdc169-201ENSMUST00000052904 Ifnlr1Q8CGK5 535 aa11.31□□□□□ -0.6
Ccdc169-201ENSMUST00000052904 Stra8P70278 393 aa11.27□□□□□ -0.6
Ccdc169-201ENSMUST00000052904 Top2aQ01320 1528 aaKnown RBP11.26□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 PrkcshO08795 521 aa11.26□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 Znf710Q3U288 666 aa11.26□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 Fmn1Q05860 1466 aa11.25□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 Cttnbp2B9EJA2 1648 aa11.24□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 Nolc1E9Q5C9 702 aaKnown RBP11.22□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 Calr4Q3TQS0 420 aa11.22□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 Rtl5Q5DTT4 599 aa11.22□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 Pelp1Q9DBD5 1123 aaKnown RBP11.22□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 NclP09405 707 aaKnown RBP11.21□□□□□ -0.61
Ccdc169-201ENSMUST00000052904 Rpap1Q80TE0 1409 aa11.21□□□□□ -0.62
Ccdc169-201ENSMUST00000052904 Slc24a1Q91WD8 1130 aa11.17□□□□□ -0.62
Ccdc169-201ENSMUST00000052904 Kdm5bQ80Y84 1544 aa11.14□□□□□ -0.63
Ccdc169-201ENSMUST00000052904 Supt16hQ920B9 1047 aa11.14□□□□□ -0.63
Ccdc169-201ENSMUST00000052904 Baz1bQ9Z277 1479 aa11.11□□□□□ -0.63
Ccdc169-201ENSMUST00000052904 BicraF8VPZ9 1578 aa11.11□□□□□ -0.63
Ccdc169-201ENSMUST00000052904 Fam50aQ9WV03 339 aaKnown RBP11.1□□□□□ -0.63
Ccdc169-201ENSMUST00000052904 Eif4g1Q6NZJ6 1600 aaKnown RBP11.1□□□□□ -0.63
Ccdc169-201ENSMUST00000052904 Arap1Q4LDD4 1452 aa11.1□□□□□ -0.63
Ccdc169-201ENSMUST00000052904 Eea1Q8BL66 1411 aa11.1□□□□□ -0.63
Ccdc169-201ENSMUST00000052904 Ttbk1Q6PCN3 1308 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 120.4 ms