RNA–Protein interactions for RNA: ENSMUST00000043757.14

Abcf1-201, Transcript of ATP-binding cassette sub-family F member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Abcf1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1-201ENSMUST00000043757 NischQ80TM9 1593 aa18.94■□□□□ 0.62
Abcf1-201ENSMUST00000043757 Abcc9P70170 1546 aa18.38■□□□□ 0.53
Abcf1-201ENSMUST00000043757 Rhox8Q6VSS7 320 aa18.3■□□□□ 0.52
Abcf1-201ENSMUST00000043757 Rpgrip1Q9EPQ2 1331 aa18.2■□□□□ 0.5
Abcf1-201ENSMUST00000043757 Gm35339A0A140LHH9 1649 aa18.2■□□□□ 0.5
Abcf1-201ENSMUST00000043757 Rtl1Q7M732 1744 aa18.19■□□□□ 0.5
Abcf1-201ENSMUST00000043757 Ccdc180J3QNE4 1664 aa18.07■□□□□ 0.48
Abcf1-201ENSMUST00000043757 Acin1Q9JIX8 1338 aaKnown RBP17.82■□□□□ 0.44
Abcf1-201ENSMUST00000043757 Abcc8B2RUS7 1588 aa17.81■□□□□ 0.44
Abcf1-201ENSMUST00000043757 Ehmt2Q9Z148 1263 aaKnown RBP17.67■□□□□ 0.42
Abcf1-201ENSMUST00000043757 Zcchc6Q5BLK4 1491 aaKnown RBP17.59■□□□□ 0.41
Abcf1-201ENSMUST00000043757 Pcgf6Q99NA9 353 aa17.53■□□□□ 0.4
Abcf1-201ENSMUST00000043757 Dcaf1Q80TR8 1506 aa17.29■□□□□ 0.36
Abcf1-201ENSMUST00000043757 HrcG5E8J6 738 aa17.2■□□□□ 0.34
Abcf1-201ENSMUST00000043757 Supt5hO55201 1082 aaKnown RBP17.1■□□□□ 0.33
Abcf1-201ENSMUST00000043757 Trim41Q5NCC3 630 aa17.04■□□□□ 0.32
Abcf1-201ENSMUST00000043757 Ccdc136Q3TVA9 1136 aa16.97■□□□□ 0.31
Abcf1-201ENSMUST00000043757 Neurod1Q60867 357 aa16.93■□□□□ 0.3
Abcf1-201ENSMUST00000043757 Rb1cc1Q9ESK9 1588 aa16.64■□□□□ 0.25
Abcf1-201ENSMUST00000043757 Zeb1Q64318 1117 aa16.64■□□□□ 0.25
Abcf1-201ENSMUST00000043757 Cep164Q5DU05 1446 aa16.53■□□□□ 0.24
Abcf1-201ENSMUST00000043757 Las1lA2BE28 776 aaKnown RBP16.5■□□□□ 0.23
Abcf1-201ENSMUST00000043757 Cngb1E1AZ71 1325 aa16.5■□□□□ 0.23
Abcf1-201ENSMUST00000043757 Sall2Q9QX96 1004 aa16.48■□□□□ 0.23
Abcf1-201ENSMUST00000043757 1700123L14RikQ3V2K7 440 aa16.46■□□□□ 0.23
Abcf1-201ENSMUST00000043757 Baz1aO88379 1555 aa16.41■□□□□ 0.22
Abcf1-201ENSMUST00000043757 Csrnp3P59055 597 aa16.39■□□□□ 0.21
Abcf1-201ENSMUST00000043757 Mier1Q5UAK0 511 aa16.38■□□□□ 0.21
Abcf1-201ENSMUST00000043757 ScribQ80U72 1612 aa16.37■□□□□ 0.21
Abcf1-201ENSMUST00000043757 NefmP08553 848 aa16.36■□□□□ 0.21
Abcf1-201ENSMUST00000043757 Anks4bQ8K3X6 423 aa16.34■□□□□ 0.21
Abcf1-201ENSMUST00000043757 Gab3Q8BSM5 595 aa16.31■□□□□ 0.2
Abcf1-201ENSMUST00000043757 Chic1Q8CBW7 227 aa16.27■□□□□ 0.2
Abcf1-201ENSMUST00000043757 Rsf1E9PWW9 1441 aaKnown RBP16.22■□□□□ 0.19
Abcf1-201ENSMUST00000043757 Kdm5dQ62240 1548 aa16.18■□□□□ 0.18
Abcf1-201ENSMUST00000043757 Aebp2Q9Z248 504 aaKnown RBP16.14■□□□□ 0.17
Abcf1-201ENSMUST00000043757 Smarca2Q6DIC0 1577 aa16.11■□□□□ 0.17
Abcf1-201ENSMUST00000043757 Wdr66E9Q743 1299 aa16.09■□□□□ 0.17
Abcf1-201ENSMUST00000043757 CenpbP27790 599 aa16.05■□□□□ 0.16
Abcf1-201ENSMUST00000043757 Ppargc1bQ8VHJ7 1014 aa16.04■□□□□ 0.16
Abcf1-201ENSMUST00000043757 Aplp2Q06335 707 aa16.03■□□□□ 0.16
Abcf1-201ENSMUST00000043757 Ccdc88bQ4QRL3 1481 aa16.03■□□□□ 0.16
Abcf1-201ENSMUST00000043757 Cdk11bP24788 784 aaKnown RBP16.03■□□□□ 0.16
Abcf1-201ENSMUST00000043757 Gm38655A0A286YDK6 273 aa16.02■□□□□ 0.15
Abcf1-201ENSMUST00000043757 Nop58Q6DFW4 536 aaKnown RBP16■□□□□ 0.15
Abcf1-201ENSMUST00000043757 UbtfP25976 765 aaKnown RBP15.93■□□□□ 0.14
Abcf1-201ENSMUST00000043757 Myt1Q8CFC2 1127 aa15.93■□□□□ 0.14
Abcf1-201ENSMUST00000043757 ClspnQ80YR7 1315 aa15.92■□□□□ 0.14
Abcf1-201ENSMUST00000043757 NacadQ5SWP3 1504 aa15.89■□□□□ 0.13
Abcf1-201ENSMUST00000043757 Crybg2B7ZCC2 1516 aa15.87■□□□□ 0.13
Abcf1-201ENSMUST00000043757 Golga3P55937 1487 aa15.81■□□□□ 0.12
Abcf1-201ENSMUST00000043757 Brd4Q9ESU6 1400 aaKnown RBP15.74■□□□□ 0.11
Abcf1-201ENSMUST00000043757 Cecr2E9Q2Z1 1453 aa15.71■□□□□ 0.11
Abcf1-201ENSMUST00000043757 TonslQ6NZL6 1363 aa15.7■□□□□ 0.1
Abcf1-201ENSMUST00000043757 Synj1Q8CHC4 1574 aa15.65■□□□□ 0.1
Abcf1-201ENSMUST00000043757 Fam71e1A1L3C1 212 aa15.63■□□□□ 0.09
Abcf1-201ENSMUST00000043757 SafbD3YXK2 937 aaKnown RBP15.63■□□□□ 0.09
Abcf1-201ENSMUST00000043757 Hnrnpul2Q00PI9 745 aaKnown RBP15.61■□□□□ 0.09
Abcf1-201ENSMUST00000043757 Mapk8ip2Q9ERE9 830 aa15.61■□□□□ 0.09
Abcf1-201ENSMUST00000043757 DiexfQ8BTT6 772 aaKnown RBP15.6■□□□□ 0.09
Abcf1-201ENSMUST00000043757 Esf1Q3V1V3 845 aaKnown RBP15.58■□□□□ 0.08
Abcf1-201ENSMUST00000043757 Sycp2Q9CUU3 1500 aa15.56■□□□□ 0.08
Abcf1-201ENSMUST00000043757 Rapgef2Q8CHG7 1496 aa15.55■□□□□ 0.08
Abcf1-201ENSMUST00000043757 Bcl11aQ9QYE3 773 aa15.54■□□□□ 0.08
Abcf1-201ENSMUST00000043757 Myt1lP97500 1187 aa15.54■□□□□ 0.08
Abcf1-201ENSMUST00000043757 Top2bQ64511 1612 aa15.53■□□□□ 0.08
Abcf1-201ENSMUST00000043757 Ap3b1Q9Z1T1 1105 aa15.49■□□□□ 0.07
Abcf1-201ENSMUST00000043757 Plekhg3Q4VAC9 1341 aa15.46■□□□□ 0.07
Abcf1-201ENSMUST00000043757 Cc2d2aQ8CFW7 1633 aa15.46■□□□□ 0.07
Abcf1-201ENSMUST00000043757 CftrP26361 1476 aa15.45■□□□□ 0.06
Abcf1-201ENSMUST00000043757 Cep162Q6ZQ06 1403 aa15.44■□□□□ 0.06
Abcf1-201ENSMUST00000043757 Ncapd3Q6ZQK0 1506 aa15.41■□□□□ 0.06
Abcf1-201ENSMUST00000043757 Tnnt3Q9QZ47 272 aa15.39■□□□□ 0.05
Abcf1-201ENSMUST00000043757 Eid3Q3V124 375 aa15.38■□□□□ 0.05
Abcf1-201ENSMUST00000043757 Clip1Q922J3 1391 aa15.34■□□□□ 0.05
Abcf1-201ENSMUST00000043757 Top2aQ01320 1528 aaKnown RBP15.31■□□□□ 0.04
Abcf1-201ENSMUST00000043757 Ifnlr1Q8CGK5 535 aa15.31■□□□□ 0.04
Abcf1-201ENSMUST00000043757 Npm2Q80W85 207 aa15.28■□□□□ 0.04
Abcf1-201ENSMUST00000043757 Znf710Q3U288 666 aa15.27■□□□□ 0.03
Abcf1-201ENSMUST00000043757 Cttnbp2B9EJA2 1648 aa15.26■□□□□ 0.03
Abcf1-201ENSMUST00000043757 Fmn1Q05860 1466 aa15.24■□□□□ 0.03
Abcf1-201ENSMUST00000043757 Anp32aO35381 247 aa15.23■□□□□ 0.03
Abcf1-201ENSMUST00000043757 Rpap1Q80TE0 1409 aa15.22■□□□□ 0.03
Abcf1-201ENSMUST00000043757 Kdm5bQ80Y84 1544 aa15.22■□□□□ 0.03
Abcf1-201ENSMUST00000043757 BicraF8VPZ9 1578 aa15.21■□□□□ 0.03
Abcf1-201ENSMUST00000043757 Nolc1E9Q5C9 702 aaKnown RBP15.2■□□□□ 0.02
Abcf1-201ENSMUST00000043757 PrkcshO08795 521 aa15.2■□□□□ 0.02
Abcf1-201ENSMUST00000043757 Eif4g1Q6NZJ6 1600 aaKnown RBP15.17■□□□□ 0.02
Abcf1-201ENSMUST00000043757 Calr4Q3TQS0 420 aa15.09■□□□□ 0.01
Abcf1-201ENSMUST00000043757 Arap1Q4LDD4 1452 aa15.09■□□□□ 0.01
Abcf1-201ENSMUST00000043757 NclP09405 707 aaKnown RBP15.06■□□□□ 0
Abcf1-201ENSMUST00000043757 Stra8P70278 393 aa15.04■□□□□ -0
Abcf1-201ENSMUST00000043757 Arhgap35Q91YM2 1499 aa15.02■□□□□ -0
Abcf1-201ENSMUST00000043757 Supt16hQ920B9 1047 aa15.02■□□□□ -0
Abcf1-201ENSMUST00000043757 Baz1bQ9Z277 1479 aa15.02■□□□□ -0
Abcf1-201ENSMUST00000043757 Eea1Q8BL66 1411 aa15□□□□□ -0.01
Abcf1-201ENSMUST00000043757 Smarca4Q3TKT4 1613 aaKnown RBP15□□□□□ -0.01
Abcf1-201ENSMUST00000043757 Arhgef5E9Q7D5 1581 aa14.98□□□□□ -0.01
Abcf1-201ENSMUST00000043757 Rtl5Q5DTT4 599 aa14.98□□□□□ -0.01
Abcf1-201ENSMUST00000043757 Ccdc18Q640L5 1455 aa14.96□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms