RNA–Protein interactions for RNA: ENSMUST00000041418.12

Stag1-201, Transcript of Cohesin subunit SA-1, mousemouse

TSL 5 BASIC

Gene Stag1, Length 5,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-201ENSMUST00000041418 Rhox8Q6VSS7 320 aa16.2■□□□□ 0.18
Stag1-201ENSMUST00000041418 Esf1Q3V1V3 845 aaKnown RBP14.5□□□□□ -0.09
Stag1-201ENSMUST00000041418 Trim41Q5NCC3 630 aa14.33□□□□□ -0.12
Stag1-201ENSMUST00000041418 NischQ80TM9 1593 aa14.32□□□□□ -0.12
Stag1-201ENSMUST00000041418 Ccdc136Q3TVA9 1136 aa14.29□□□□□ -0.12
Stag1-201ENSMUST00000041418 Cngb1E1AZ71 1325 aa14.24□□□□□ -0.13
Stag1-201ENSMUST00000041418 Zeb1Q64318 1117 aa14.18□□□□□ -0.14
Stag1-201ENSMUST00000041418 Rpgrip1Q9EPQ2 1331 aa14.17□□□□□ -0.14
Stag1-201ENSMUST00000041418 Npm2Q80W85 207 aa14.06□□□□□ -0.16
Stag1-201ENSMUST00000041418 Ube2uB1AUC4 352 aa13.98□□□□□ -0.17
Stag1-201ENSMUST00000041418 Gab3Q8BSM5 595 aa13.87□□□□□ -0.19
Stag1-201ENSMUST00000041418 Las1lA2BE28 776 aaKnown RBP13.83□□□□□ -0.2
Stag1-201ENSMUST00000041418 Myt1lP97500 1187 aa13.78□□□□□ -0.2
Stag1-201ENSMUST00000041418 Ehmt2Q9Z148 1263 aaKnown RBP13.68□□□□□ -0.22
Stag1-201ENSMUST00000041418 Wdr66E9Q743 1299 aa13.58□□□□□ -0.24
Stag1-201ENSMUST00000041418 Abcc9P70170 1546 aa13.57□□□□□ -0.24
Stag1-201ENSMUST00000041418 Il27Q8K3I6 234 aa13.55□□□□□ -0.24
Stag1-201ENSMUST00000041418 Zcchc6Q5BLK4 1491 aaKnown RBP13.42□□□□□ -0.26
Stag1-201ENSMUST00000041418 HrcG5E8J6 738 aa13.4□□□□□ -0.26
Stag1-201ENSMUST00000041418 Pelp1Q9DBD5 1123 aaKnown RBP13.38□□□□□ -0.27
Stag1-201ENSMUST00000041418 NefmP08553 848 aa13.33□□□□□ -0.28
Stag1-201ENSMUST00000041418 Npm1Q61937 292 aaKnown RBP13.28□□□□□ -0.28
Stag1-201ENSMUST00000041418 UbtfP25976 765 aaKnown RBP13.28□□□□□ -0.28
Stag1-201ENSMUST00000041418 Gm35339A0A140LHH9 1649 aa13.26□□□□□ -0.29
Stag1-201ENSMUST00000041418 Stra8P70278 393 aa13.23□□□□□ -0.29
Stag1-201ENSMUST00000041418 Ccdc180J3QNE4 1664 aa13.17□□□□□ -0.3
Stag1-201ENSMUST00000041418 Anp32bQ9EST5 272 aaKnown RBP13.14□□□□□ -0.31
Stag1-201ENSMUST00000041418 Abcc8B2RUS7 1588 aa13.07□□□□□ -0.32
Stag1-201ENSMUST00000041418 Fam50aQ9WV03 339 aaKnown RBP13.06□□□□□ -0.32
Stag1-201ENSMUST00000041418 NclP09405 707 aaKnown RBP13.06□□□□□ -0.32
Stag1-201ENSMUST00000041418 Rtl1Q7M732 1744 aa13.05□□□□□ -0.32
Stag1-201ENSMUST00000041418 Os9Q8K2C7 672 aa13.03□□□□□ -0.32
Stag1-201ENSMUST00000041418 Ap3b1Q9Z1T1 1105 aa13□□□□□ -0.33
Stag1-201ENSMUST00000041418 Acin1Q9JIX8 1338 aaKnown RBP12.98□□□□□ -0.33
Stag1-201ENSMUST00000041418 Hdac5Q9Z2V6 1113 aa12.92□□□□□ -0.34
Stag1-201ENSMUST00000041418 Brd4Q9ESU6 1400 aaKnown RBP12.91□□□□□ -0.34
Stag1-201ENSMUST00000041418 Gm13697A2AK42 830 aa12.89□□□□□ -0.35
Stag1-201ENSMUST00000041418 NrdcQ8BHG1 1161 aa12.89□□□□□ -0.35
Stag1-201ENSMUST00000041418 Ubl4bQ9CQ84 188 aa12.87□□□□□ -0.35
Stag1-201ENSMUST00000041418 Slc24a1Q91WD8 1130 aa12.86□□□□□ -0.35
Stag1-201ENSMUST00000041418 Neurod1Q60867 357 aa12.85□□□□□ -0.35
Stag1-201ENSMUST00000041418 Hnrnpul2Q00PI9 745 aaKnown RBP12.77□□□□□ -0.36
Stag1-201ENSMUST00000041418 Ifnlr1Q8CGK5 535 aa12.75□□□□□ -0.37
Stag1-201ENSMUST00000041418 Lmod2Q3UHZ5 550 aa12.74□□□□□ -0.37
Stag1-201ENSMUST00000041418 Ttbk1Q6PCN3 1308 aa12.74□□□□□ -0.37
Stag1-201ENSMUST00000041418 NeflP08551 543 aa12.7□□□□□ -0.38
Stag1-201ENSMUST00000041418 CenpbP27790 599 aa12.7□□□□□ -0.38
Stag1-201ENSMUST00000041418 Cdk11bP24788 784 aaKnown RBP12.67□□□□□ -0.38
Stag1-201ENSMUST00000041418 NacadQ5SWP3 1504 aa12.67□□□□□ -0.38
Stag1-201ENSMUST00000041418 TonslQ6NZL6 1363 aa12.66□□□□□ -0.38
Stag1-201ENSMUST00000041418 Zbtb7cQ8VCZ7 619 aa12.66□□□□□ -0.38
Stag1-201ENSMUST00000041418 Gm13695A2AK44 830 aa12.64□□□□□ -0.39
Stag1-201ENSMUST00000041418 Tnnt3Q9QZ47 272 aa12.63□□□□□ -0.39
Stag1-201ENSMUST00000041418 Fkbp15Q6P9Q6 1216 aaKnown RBP12.63□□□□□ -0.39
Stag1-201ENSMUST00000041418 Ccer2J3QPU5 274 aa12.62□□□□□ -0.39
Stag1-201ENSMUST00000041418 Atp1b4Q99ME6 356 aa12.6□□□□□ -0.39
Stag1-201ENSMUST00000041418 Rb1cc1Q9ESK9 1588 aa12.57□□□□□ -0.4
Stag1-201ENSMUST00000041418 Clstn2Q9ER65 966 aa12.57□□□□□ -0.4
Stag1-201ENSMUST00000041418 Plekhg3Q4VAC9 1341 aa12.57□□□□□ -0.4
Stag1-201ENSMUST00000041418 Erich6D3Z6S9 713 aa12.56□□□□□ -0.4
Stag1-201ENSMUST00000041418 Clip1Q922J3 1391 aa12.55□□□□□ -0.4
Stag1-201ENSMUST00000041418 Ercc6F8VPZ5 1481 aa12.53□□□□□ -0.4
Stag1-201ENSMUST00000041418 Rsf1E9PWW9 1441 aaKnown RBP12.52□□□□□ -0.41
Stag1-201ENSMUST00000041418 Safb2Q80YR5 991 aaKnown RBP12.49□□□□□ -0.41
Stag1-201ENSMUST00000041418 Nop58Q6DFW4 536 aaKnown RBP12.48□□□□□ -0.41
Stag1-201ENSMUST00000041418 Mier1Q5UAK0 511 aa12.46□□□□□ -0.41
Stag1-201ENSMUST00000041418 Plppr3Q7TPB0 716 aa12.45□□□□□ -0.42
Stag1-201ENSMUST00000041418 Cep164Q5DU05 1446 aa12.45□□□□□ -0.42
Stag1-201ENSMUST00000041418 Kif15Q6P9L6 1387 aa12.43□□□□□ -0.42
Stag1-201ENSMUST00000041418 Nlrp6Q91WS2 869 aa12.42□□□□□ -0.42
Stag1-201ENSMUST00000041418 Ccdc18Q640L5 1455 aa12.4□□□□□ -0.42
Stag1-201ENSMUST00000041418 Eif5bQ05D44 1216 aaKnown RBP12.4□□□□□ -0.42
Stag1-201ENSMUST00000041418 Dcaf1Q80TR8 1506 aa12.39□□□□□ -0.43
Stag1-201ENSMUST00000041418 DiexfQ8BTT6 772 aaKnown RBP12.37□□□□□ -0.43
Stag1-201ENSMUST00000041418 Chic1Q8CBW7 227 aa12.36□□□□□ -0.43
Stag1-201ENSMUST00000041418 Pds5bQ4VA53 1446 aaKnown RBP12.35□□□□□ -0.43
Stag1-201ENSMUST00000041418 Baz1aO88379 1555 aa12.32□□□□□ -0.44
Stag1-201ENSMUST00000041418 Amer1Q7TS75 1132 aa12.31□□□□□ -0.44
Stag1-201ENSMUST00000041418 BlmO88700 1416 aa12.31□□□□□ -0.44
Stag1-201ENSMUST00000041418 Setd5Q5XJV7 1441 aa12.29□□□□□ -0.44
Stag1-201ENSMUST00000041418 Zbtb4Q5F293 982 aa12.28□□□□□ -0.44
Stag1-201ENSMUST00000041418 Golga3P55937 1487 aa12.27□□□□□ -0.45
Stag1-201ENSMUST00000041418 ClspnQ80YR7 1315 aa12.26□□□□□ -0.45
Stag1-201ENSMUST00000041418 Arhgap27A2AB59 869 aa12.23□□□□□ -0.45
Stag1-201ENSMUST00000041418 Chic2Q9D9G3 165 aa12.22□□□□□ -0.45
Stag1-201ENSMUST00000041418 4930567H17RikQ3V0K5 233 aa12.21□□□□□ -0.45
Stag1-201ENSMUST00000041418 Pcgf6Q99NA9 353 aa12.21□□□□□ -0.45
Stag1-201ENSMUST00000041418 Prdm10Q3UTQ7 1184 aa12.19□□□□□ -0.46
Stag1-201ENSMUST00000041418 Eid3Q3V124 375 aa12.19□□□□□ -0.46
Stag1-201ENSMUST00000041418 Ppargc1bQ8VHJ7 1014 aa12.18□□□□□ -0.46
Stag1-201ENSMUST00000041418 Upf2A2AT37 1269 aaKnown RBP12.17□□□□□ -0.46
Stag1-201ENSMUST00000041418 P3h3Q8CG70 732 aa12.16□□□□□ -0.46
Stag1-201ENSMUST00000041418 Zfp777B9EKF4 885 aa12.16□□□□□ -0.46
Stag1-201ENSMUST00000041418 4933416C03RikQ3V063 378 aa12.16□□□□□ -0.46
Stag1-201ENSMUST00000041418 IqubQ8CDK3 788 aa12.15□□□□□ -0.46
Stag1-201ENSMUST00000041418 Eea1Q8BL66 1411 aa12.14□□□□□ -0.47
Stag1-201ENSMUST00000041418 Kdm5dQ62240 1548 aa12.13□□□□□ -0.47
Stag1-201ENSMUST00000041418 Polr3glQ8R0C0 218 aa12.13□□□□□ -0.47
Stag1-201ENSMUST00000041418 Rtl5Q5DTT4 599 aa12.12□□□□□ -0.47
Stag1-201ENSMUST00000041418 Ppp1r18Q8BQ30 594 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms