RNA–Protein interactions for RNA: ENSMUST00000036579.13

Vps13d-202, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Vps13d, Length 15,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-202ENSMUST00000036579 Rhox8Q6VSS7 320 aa8.1□□□□□ -1.11
Vps13d-202ENSMUST00000036579 Rpgrip1Q9EPQ2 1331 aa8.02□□□□□ -1.13
Vps13d-202ENSMUST00000036579 Las1lA2BE28 776 aaKnown RBP7.85□□□□□ -1.15
Vps13d-202ENSMUST00000036579 Cngb1E1AZ71 1325 aa7.79□□□□□ -1.16
Vps13d-202ENSMUST00000036579 Pelp1Q9DBD5 1123 aaKnown RBP7.64□□□□□ -1.19
Vps13d-202ENSMUST00000036579 Ehmt2Q9Z148 1263 aaKnown RBP7.59□□□□□ -1.19
Vps13d-202ENSMUST00000036579 Myt1Q8CFC2 1127 aa7.51□□□□□ -1.21
Vps13d-202ENSMUST00000036579 Wdr66E9Q743 1299 aa7.38□□□□□ -1.23
Vps13d-202ENSMUST00000036579 CenpbP27790 599 aa7.35□□□□□ -1.23
Vps13d-202ENSMUST00000036579 Ube2uB1AUC4 352 aa7.34□□□□□ -1.23
Vps13d-202ENSMUST00000036579 Amer1Q7TS75 1132 aa7.32□□□□□ -1.24
Vps13d-202ENSMUST00000036579 Zeb1Q64318 1117 aa7.26□□□□□ -1.25
Vps13d-202ENSMUST00000036579 Stra8P70278 393 aa7.19□□□□□ -1.26
Vps13d-202ENSMUST00000036579 4930567H17RikQ3V0K5 233 aa7.17□□□□□ -1.26
Vps13d-202ENSMUST00000036579 Gab3Q8BSM5 595 aa7.15□□□□□ -1.26
Vps13d-202ENSMUST00000036579 Esf1Q3V1V3 845 aaKnown RBP7.14□□□□□ -1.27
Vps13d-202ENSMUST00000036579 Ccdc136Q3TVA9 1136 aa7.13□□□□□ -1.27
Vps13d-202ENSMUST00000036579 NefmP08553 848 aa7.11□□□□□ -1.27
Vps13d-202ENSMUST00000036579 Acin1Q9JIX8 1338 aaKnown RBP7.09□□□□□ -1.27
Vps13d-202ENSMUST00000036579 Slc24a1Q91WD8 1130 aa7.09□□□□□ -1.27
Vps13d-202ENSMUST00000036579 Rtl5Q5DTT4 599 aa7.07□□□□□ -1.28
Vps13d-202ENSMUST00000036579 Trim41Q5NCC3 630 aa7.06□□□□□ -1.28
Vps13d-202ENSMUST00000036579 Myt1lP97500 1187 aa7.06□□□□□ -1.28
Vps13d-202ENSMUST00000036579 Npm2Q80W85 207 aa7.04□□□□□ -1.28
Vps13d-202ENSMUST00000036579 Tnnt3Q9QZ47 272 aa7.02□□□□□ -1.29
Vps13d-202ENSMUST00000036579 DiexfQ8BTT6 772 aaKnown RBP6.98□□□□□ -1.29
Vps13d-202ENSMUST00000036579 Ttbk1Q6PCN3 1308 aa6.97□□□□□ -1.29
Vps13d-202ENSMUST00000036579 Cdk11bP24788 784 aaKnown RBP6.96□□□□□ -1.29
Vps13d-202ENSMUST00000036579 Pcgf6Q99NA9 353 aa6.94□□□□□ -1.3
Vps13d-202ENSMUST00000036579 UbtfP25976 765 aaKnown RBP6.92□□□□□ -1.3
Vps13d-202ENSMUST00000036579 4933416C03RikQ3V063 378 aa6.89□□□□□ -1.31
Vps13d-202ENSMUST00000036579 Anp32bQ9EST5 272 aaKnown RBP6.85□□□□□ -1.31
Vps13d-202ENSMUST00000036579 Rtl1Q7M732 1744 aa6.85□□□□□ -1.31
Vps13d-202ENSMUST00000036579 NeflP08551 543 aa6.84□□□□□ -1.31
Vps13d-202ENSMUST00000036579 HrcG5E8J6 738 aa6.84□□□□□ -1.31
Vps13d-202ENSMUST00000036579 Eif5bQ05D44 1216 aaKnown RBP6.84□□□□□ -1.31
Vps13d-202ENSMUST00000036579 Ccdc180J3QNE4 1664 aa6.83□□□□□ -1.32
Vps13d-202ENSMUST00000036579 Neurod1Q60867 357 aa6.8□□□□□ -1.32
Vps13d-202ENSMUST00000036579 Nop58Q6DFW4 536 aaKnown RBP6.8□□□□□ -1.32
Vps13d-202ENSMUST00000036579 Ppargc1bQ8VHJ7 1014 aa6.79□□□□□ -1.32
Vps13d-202ENSMUST00000036579 NrdcQ8BHG1 1161 aa6.78□□□□□ -1.32
Vps13d-202ENSMUST00000036579 Ccdc9Q8VC31 543 aaKnown RBP6.78□□□□□ -1.32
Vps13d-202ENSMUST00000036579 Ap3b1Q9Z1T1 1105 aa6.74□□□□□ -1.33
Vps13d-202ENSMUST00000036579 Os9Q8K2C7 672 aa6.72□□□□□ -1.33
Vps13d-202ENSMUST00000036579 Anp32aO35381 247 aa6.72□□□□□ -1.33
Vps13d-202ENSMUST00000036579 Ythdc1E9Q5K9 736 aaKnown RBP6.7□□□□□ -1.34
Vps13d-202ENSMUST00000036579 Il27Q8K3I6 234 aa6.69□□□□□ -1.34
Vps13d-202ENSMUST00000036579 Aplp2Q06335 707 aa6.68□□□□□ -1.34
Vps13d-202ENSMUST00000036579 Anks4bQ8K3X6 423 aa6.67□□□□□ -1.34
Vps13d-202ENSMUST00000036579 NclP09405 707 aaKnown RBP6.66□□□□□ -1.34
Vps13d-202ENSMUST00000036579 NischQ80TM9 1593 aa6.66□□□□□ -1.34
Vps13d-202ENSMUST00000036579 Supt5hO55201 1082 aaKnown RBP6.65□□□□□ -1.35
Vps13d-202ENSMUST00000036579 Fam50aQ9WV03 339 aaKnown RBP6.64□□□□□ -1.35
Vps13d-202ENSMUST00000036579 Chic1Q8CBW7 227 aa6.64□□□□□ -1.35
Vps13d-202ENSMUST00000036579 Zbtb7cQ8VCZ7 619 aa6.6□□□□□ -1.35
Vps13d-202ENSMUST00000036579 DaxxO35613 739 aa6.59□□□□□ -1.35
Vps13d-202ENSMUST00000036579 TonslQ6NZL6 1363 aa6.57□□□□□ -1.36
Vps13d-202ENSMUST00000036579 Hdac5Q9Z2V6 1113 aa6.56□□□□□ -1.36
Vps13d-202ENSMUST00000036579 Zbtb4Q5F293 982 aa6.55□□□□□ -1.36
Vps13d-202ENSMUST00000036579 Prdm10Q3UTQ7 1184 aa6.54□□□□□ -1.36
Vps13d-202ENSMUST00000036579 ClspnQ80YR7 1315 aa6.54□□□□□ -1.36
Vps13d-202ENSMUST00000036579 ArxO35085 564 aa6.54□□□□□ -1.36
Vps13d-202ENSMUST00000036579 CatipB9EKE5 520 aa6.53□□□□□ -1.36
Vps13d-202ENSMUST00000036579 Polr3glQ8R0C0 218 aa6.53□□□□□ -1.36
Vps13d-202ENSMUST00000036579 Hsp90aa1P07901 733 aaKnown RBP6.52□□□□□ -1.37
Vps13d-202ENSMUST00000036579 Nlrp6Q91WS2 869 aa6.48□□□□□ -1.37
Vps13d-202ENSMUST00000036579 Gm38655A0A286YDK6 273 aa6.48□□□□□ -1.37
Vps13d-202ENSMUST00000036579 Mapk8ip2Q9ERE9 830 aa6.48□□□□□ -1.37
Vps13d-202ENSMUST00000036579 Ifnlr1Q8CGK5 535 aa6.48□□□□□ -1.37
Vps13d-202ENSMUST00000036579 Hnrnpul2Q00PI9 745 aaKnown RBP6.47□□□□□ -1.37
Vps13d-202ENSMUST00000036579 Upf2A2AT37 1269 aaKnown RBP6.47□□□□□ -1.37
Vps13d-202ENSMUST00000036579 Csrnp3P59055 597 aa6.46□□□□□ -1.37
Vps13d-202ENSMUST00000036579 Rangap1P46061 589 aaKnown RBP6.46□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Atp1b4Q99ME6 356 aa6.46□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Mier1Q5UAK0 511 aa6.45□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Erich6D3Z6S9 713 aa6.44□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Gm13697A2AK42 830 aa6.44□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Lmod3E9QA62 571 aa6.43□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Ccer2J3QPU5 274 aa6.42□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Lmod2Q3UHZ5 550 aa6.41□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Plppr3Q7TPB0 716 aa6.41□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Vsig10D3YX43 558 aa6.41□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Bcl11aQ9QYE3 773 aa6.4□□□□□ -1.38
Vps13d-202ENSMUST00000036579 Ccdc27Q3V036 639 aa6.4□□□□□ -1.39
Vps13d-202ENSMUST00000036579 Calr4Q3TQS0 420 aa6.39□□□□□ -1.39
Vps13d-202ENSMUST00000036579 Ppp4r2Q0VGB7 417 aa6.37□□□□□ -1.39
Vps13d-202ENSMUST00000036579 Trim44Q9QXA7 346 aa6.37□□□□□ -1.39
Vps13d-202ENSMUST00000036579 Wdr43Q6ZQL4 677 aaKnown RBP6.35□□□□□ -1.39
Vps13d-202ENSMUST00000036579 1700123L14RikQ3V2K7 440 aa6.34□□□□□ -1.39
Vps13d-202ENSMUST00000036579 Htatsf1Q8BGC0 757 aa6.34□□□□□ -1.39
Vps13d-202ENSMUST00000036579 DekQ7TNV0 380 aaKnown RBP6.33□□□□□ -1.4
Vps13d-202ENSMUST00000036579 AU015836B2RUM3 263 aa6.33□□□□□ -1.4
Vps13d-202ENSMUST00000036579 Adam1bQ8R534 806 aa6.33□□□□□ -1.4
Vps13d-202ENSMUST00000036579 Irx3P81067 507 aa6.33□□□□□ -1.4
Vps13d-202ENSMUST00000036579 Rad21Q61550 635 aaKnown RBP6.32□□□□□ -1.4
Vps13d-202ENSMUST00000036579 Sall2Q9QX96 1004 aa6.32□□□□□ -1.4
Vps13d-202ENSMUST00000036579 Gm13695A2AK44 830 aa6.32□□□□□ -1.4
Vps13d-202ENSMUST00000036579 Fkbp15Q6P9Q6 1216 aaKnown RBP6.31□□□□□ -1.4
Vps13d-202ENSMUST00000036579 Dcaf1Q80TR8 1506 aa6.29□□□□□ -1.4
Vps13d-202ENSMUST00000036579 Fam71e1A1L3C1 212 aa6.29□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 7.2 ms