RNA–Protein interactions for RNA: ENSMUST00000036579.13

Vps13d-202, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Vps13d, Length 15,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-202ENSMUST00000036579 Rhox8Q6VSS7 320 aa8,1□□□□□ -1,11
Vps13d-202ENSMUST00000036579 Rpgrip1Q9EPQ2 1331 aa8,02□□□□□ -1,13
Vps13d-202ENSMUST00000036579 Las1lA2BE28 776 aaKnown RBP7,85□□□□□ -1,15
Vps13d-202ENSMUST00000036579 Cngb1E1AZ71 1325 aa7,79□□□□□ -1,16
Vps13d-202ENSMUST00000036579 Pelp1Q9DBD5 1123 aaKnown RBP7,64□□□□□ -1,19
Vps13d-202ENSMUST00000036579 Ehmt2Q9Z148 1263 aaKnown RBP7,59□□□□□ -1,19
Vps13d-202ENSMUST00000036579 Myt1Q8CFC2 1127 aa7,51□□□□□ -1,21
Vps13d-202ENSMUST00000036579 Wdr66E9Q743 1299 aa7,38□□□□□ -1,23
Vps13d-202ENSMUST00000036579 CenpbP27790 599 aa7,35□□□□□ -1,23
Vps13d-202ENSMUST00000036579 Ube2uB1AUC4 352 aa7,34□□□□□ -1,23
Vps13d-202ENSMUST00000036579 Amer1Q7TS75 1132 aa7,32□□□□□ -1,24
Vps13d-202ENSMUST00000036579 Zeb1Q64318 1117 aa7,26□□□□□ -1,25
Vps13d-202ENSMUST00000036579 Stra8P70278 393 aa7,19□□□□□ -1,26
Vps13d-202ENSMUST00000036579 4930567H17RikQ3V0K5 233 aa7,17□□□□□ -1,26
Vps13d-202ENSMUST00000036579 Gab3Q8BSM5 595 aa7,15□□□□□ -1,26
Vps13d-202ENSMUST00000036579 Esf1Q3V1V3 845 aaKnown RBP7,14□□□□□ -1,27
Vps13d-202ENSMUST00000036579 Ccdc136Q3TVA9 1136 aa7,13□□□□□ -1,27
Vps13d-202ENSMUST00000036579 NefmP08553 848 aa7,11□□□□□ -1,27
Vps13d-202ENSMUST00000036579 Acin1Q9JIX8 1338 aaKnown RBP7,09□□□□□ -1,27
Vps13d-202ENSMUST00000036579 Slc24a1Q91WD8 1130 aa7,09□□□□□ -1,27
Vps13d-202ENSMUST00000036579 Rtl5Q5DTT4 599 aa7,07□□□□□ -1,28
Vps13d-202ENSMUST00000036579 Trim41Q5NCC3 630 aa7,06□□□□□ -1,28
Vps13d-202ENSMUST00000036579 Myt1lP97500 1187 aa7,06□□□□□ -1,28
Vps13d-202ENSMUST00000036579 Npm2Q80W85 207 aa7,04□□□□□ -1,28
Vps13d-202ENSMUST00000036579 Tnnt3Q9QZ47 272 aa7,02□□□□□ -1,29
Vps13d-202ENSMUST00000036579 DiexfQ8BTT6 772 aaKnown RBP6,98□□□□□ -1,29
Vps13d-202ENSMUST00000036579 Ttbk1Q6PCN3 1308 aa6,97□□□□□ -1,29
Vps13d-202ENSMUST00000036579 Cdk11bP24788 784 aaKnown RBP6,96□□□□□ -1,29
Vps13d-202ENSMUST00000036579 Pcgf6Q99NA9 353 aa6,94□□□□□ -1,3
Vps13d-202ENSMUST00000036579 UbtfP25976 765 aaKnown RBP6,92□□□□□ -1,3
Vps13d-202ENSMUST00000036579 4933416C03RikQ3V063 378 aa6,89□□□□□ -1,31
Vps13d-202ENSMUST00000036579 Anp32bQ9EST5 272 aaKnown RBP6,85□□□□□ -1,31
Vps13d-202ENSMUST00000036579 Rtl1Q7M732 1744 aa6,85□□□□□ -1,31
Vps13d-202ENSMUST00000036579 NeflP08551 543 aa6,84□□□□□ -1,31
Vps13d-202ENSMUST00000036579 HrcG5E8J6 738 aa6,84□□□□□ -1,31
Vps13d-202ENSMUST00000036579 Eif5bQ05D44 1216 aaKnown RBP6,84□□□□□ -1,31
Vps13d-202ENSMUST00000036579 Ccdc180J3QNE4 1664 aa6,83□□□□□ -1,32
Vps13d-202ENSMUST00000036579 Neurod1Q60867 357 aa6,8□□□□□ -1,32
Vps13d-202ENSMUST00000036579 Nop58Q6DFW4 536 aaKnown RBP6,8□□□□□ -1,32
Vps13d-202ENSMUST00000036579 Ppargc1bQ8VHJ7 1014 aa6,79□□□□□ -1,32
Vps13d-202ENSMUST00000036579 NrdcQ8BHG1 1161 aa6,78□□□□□ -1,32
Vps13d-202ENSMUST00000036579 Ccdc9Q8VC31 543 aaKnown RBP6,78□□□□□ -1,32
Vps13d-202ENSMUST00000036579 Ap3b1Q9Z1T1 1105 aa6,74□□□□□ -1,33
Vps13d-202ENSMUST00000036579 Os9Q8K2C7 672 aa6,72□□□□□ -1,33
Vps13d-202ENSMUST00000036579 Anp32aO35381 247 aa6,72□□□□□ -1,33
Vps13d-202ENSMUST00000036579 Ythdc1E9Q5K9 736 aaKnown RBP6,7□□□□□ -1,34
Vps13d-202ENSMUST00000036579 Il27Q8K3I6 234 aa6,69□□□□□ -1,34
Vps13d-202ENSMUST00000036579 Aplp2Q06335 707 aa6,68□□□□□ -1,34
Vps13d-202ENSMUST00000036579 Anks4bQ8K3X6 423 aa6,67□□□□□ -1,34
Vps13d-202ENSMUST00000036579 NclP09405 707 aaKnown RBP6,66□□□□□ -1,34
Vps13d-202ENSMUST00000036579 NischQ80TM9 1593 aa6,66□□□□□ -1,34
Vps13d-202ENSMUST00000036579 Supt5hO55201 1082 aaKnown RBP6,65□□□□□ -1,35
Vps13d-202ENSMUST00000036579 Fam50aQ9WV03 339 aaKnown RBP6,64□□□□□ -1,35
Vps13d-202ENSMUST00000036579 Chic1Q8CBW7 227 aa6,64□□□□□ -1,35
Vps13d-202ENSMUST00000036579 Zbtb7cQ8VCZ7 619 aa6,6□□□□□ -1,35
Vps13d-202ENSMUST00000036579 DaxxO35613 739 aa6,59□□□□□ -1,35
Vps13d-202ENSMUST00000036579 TonslQ6NZL6 1363 aa6,57□□□□□ -1,36
Vps13d-202ENSMUST00000036579 Hdac5Q9Z2V6 1113 aa6,56□□□□□ -1,36
Vps13d-202ENSMUST00000036579 Zbtb4Q5F293 982 aa6,55□□□□□ -1,36
Vps13d-202ENSMUST00000036579 Prdm10Q3UTQ7 1184 aa6,54□□□□□ -1,36
Vps13d-202ENSMUST00000036579 ClspnQ80YR7 1315 aa6,54□□□□□ -1,36
Vps13d-202ENSMUST00000036579 ArxO35085 564 aa6,54□□□□□ -1,36
Vps13d-202ENSMUST00000036579 CatipB9EKE5 520 aa6,53□□□□□ -1,36
Vps13d-202ENSMUST00000036579 Polr3glQ8R0C0 218 aa6,53□□□□□ -1,36
Vps13d-202ENSMUST00000036579 Hsp90aa1P07901 733 aaKnown RBP6,52□□□□□ -1,37
Vps13d-202ENSMUST00000036579 Nlrp6Q91WS2 869 aa6,48□□□□□ -1,37
Vps13d-202ENSMUST00000036579 Gm38655A0A286YDK6 273 aa6,48□□□□□ -1,37
Vps13d-202ENSMUST00000036579 Mapk8ip2Q9ERE9 830 aa6,48□□□□□ -1,37
Vps13d-202ENSMUST00000036579 Ifnlr1Q8CGK5 535 aa6,48□□□□□ -1,37
Vps13d-202ENSMUST00000036579 Hnrnpul2Q00PI9 745 aaKnown RBP6,47□□□□□ -1,37
Vps13d-202ENSMUST00000036579 Upf2A2AT37 1269 aaKnown RBP6,47□□□□□ -1,37
Vps13d-202ENSMUST00000036579 Csrnp3P59055 597 aa6,46□□□□□ -1,37
Vps13d-202ENSMUST00000036579 Rangap1P46061 589 aaKnown RBP6,46□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Atp1b4Q99ME6 356 aa6,46□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Mier1Q5UAK0 511 aa6,45□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Erich6D3Z6S9 713 aa6,44□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Gm13697A2AK42 830 aa6,44□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Lmod3E9QA62 571 aa6,43□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Ccer2J3QPU5 274 aa6,42□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Lmod2Q3UHZ5 550 aa6,41□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Plppr3Q7TPB0 716 aa6,41□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Vsig10D3YX43 558 aa6,41□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Bcl11aQ9QYE3 773 aa6,4□□□□□ -1,38
Vps13d-202ENSMUST00000036579 Ccdc27Q3V036 639 aa6,4□□□□□ -1,39
Vps13d-202ENSMUST00000036579 Calr4Q3TQS0 420 aa6,39□□□□□ -1,39
Vps13d-202ENSMUST00000036579 Ppp4r2Q0VGB7 417 aa6,37□□□□□ -1,39
Vps13d-202ENSMUST00000036579 Trim44Q9QXA7 346 aa6,37□□□□□ -1,39
Vps13d-202ENSMUST00000036579 Wdr43Q6ZQL4 677 aaKnown RBP6,35□□□□□ -1,39
Vps13d-202ENSMUST00000036579 1700123L14RikQ3V2K7 440 aa6,34□□□□□ -1,39
Vps13d-202ENSMUST00000036579 Htatsf1Q8BGC0 757 aa6,34□□□□□ -1,39
Vps13d-202ENSMUST00000036579 DekQ7TNV0 380 aaKnown RBP6,33□□□□□ -1,4
Vps13d-202ENSMUST00000036579 AU015836B2RUM3 263 aa6,33□□□□□ -1,4
Vps13d-202ENSMUST00000036579 Adam1bQ8R534 806 aa6,33□□□□□ -1,4
Vps13d-202ENSMUST00000036579 Irx3P81067 507 aa6,33□□□□□ -1,4
Vps13d-202ENSMUST00000036579 Rad21Q61550 635 aaKnown RBP6,32□□□□□ -1,4
Vps13d-202ENSMUST00000036579 Sall2Q9QX96 1004 aa6,32□□□□□ -1,4
Vps13d-202ENSMUST00000036579 Gm13695A2AK44 830 aa6,32□□□□□ -1,4
Vps13d-202ENSMUST00000036579 Fkbp15Q6P9Q6 1216 aaKnown RBP6,31□□□□□ -1,4
Vps13d-202ENSMUST00000036579 Dcaf1Q80TR8 1506 aa6,29□□□□□ -1,4
Vps13d-202ENSMUST00000036579 Fam71e1A1L3C1 212 aa6,29□□□□□ -1,4
Retrieved 100 of 22,080 RNA–protein pairs in 11,1 ms