RNA–Protein interactions for RNA: ENSMUST00000036576.9

Ccdc138-201, Transcript of Coiled-coil domain-containing protein 138, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc138, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc138-201ENSMUST00000036576 NischQ80TM9 1593 aa17.93■□□□□ 0.46
Ccdc138-201ENSMUST00000036576 Gm35339A0A140LHH9 1649 aa17.56■□□□□ 0.4
Ccdc138-201ENSMUST00000036576 Rtl1Q7M732 1744 aa17.42■□□□□ 0.38
Ccdc138-201ENSMUST00000036576 Abcc9P70170 1546 aa17.4■□□□□ 0.38
Ccdc138-201ENSMUST00000036576 Ccdc180J3QNE4 1664 aa17.1■□□□□ 0.33
Ccdc138-201ENSMUST00000036576 Abcc8B2RUS7 1588 aa17.09■□□□□ 0.33
Ccdc138-201ENSMUST00000036576 Rpgrip1Q9EPQ2 1331 aa17.08■□□□□ 0.32
Ccdc138-201ENSMUST00000036576 Rhox8Q6VSS7 320 aa16.78■□□□□ 0.28
Ccdc138-201ENSMUST00000036576 Zcchc6Q5BLK4 1491 aaKnown RBP16.48■□□□□ 0.23
Ccdc138-201ENSMUST00000036576 Acin1Q9JIX8 1338 aaKnown RBP16.46■□□□□ 0.23
Ccdc138-201ENSMUST00000036576 ScribQ80U72 1612 aa16.24■□□□□ 0.19
Ccdc138-201ENSMUST00000036576 Dcaf1Q80TR8 1506 aa16.21■□□□□ 0.19
Ccdc138-201ENSMUST00000036576 Pcgf6Q99NA9 353 aa16.14■□□□□ 0.17
Ccdc138-201ENSMUST00000036576 HrcG5E8J6 738 aa16.11■□□□□ 0.17
Ccdc138-201ENSMUST00000036576 Ehmt2Q9Z148 1263 aaKnown RBP16.11■□□□□ 0.17
Ccdc138-201ENSMUST00000036576 Kdm5dQ62240 1548 aa15.84■□□□□ 0.13
Ccdc138-201ENSMUST00000036576 Trim41Q5NCC3 630 aa15.71■□□□□ 0.11
Ccdc138-201ENSMUST00000036576 Supt5hO55201 1082 aaKnown RBP15.71■□□□□ 0.1
Ccdc138-201ENSMUST00000036576 Rb1cc1Q9ESK9 1588 aa15.7■□□□□ 0.1
Ccdc138-201ENSMUST00000036576 NacadQ5SWP3 1504 aa15.63■□□□□ 0.09
Ccdc138-201ENSMUST00000036576 Neurod1Q60867 357 aa15.57■□□□□ 0.08
Ccdc138-201ENSMUST00000036576 Baz1aO88379 1555 aa15.53■□□□□ 0.08
Ccdc138-201ENSMUST00000036576 Ccdc136Q3TVA9 1136 aa15.53■□□□□ 0.08
Ccdc138-201ENSMUST00000036576 Cep164Q5DU05 1446 aa15.5■□□□□ 0.07
Ccdc138-201ENSMUST00000036576 Las1lA2BE28 776 aaKnown RBP15.36■□□□□ 0.05
Ccdc138-201ENSMUST00000036576 Sycp2Q9CUU3 1500 aa15.34■□□□□ 0.05
Ccdc138-201ENSMUST00000036576 NefmP08553 848 aa15.26■□□□□ 0.03
Ccdc138-201ENSMUST00000036576 Zeb1Q64318 1117 aa15.24■□□□□ 0.03
Ccdc138-201ENSMUST00000036576 Smarca2Q6DIC0 1577 aa15.24■□□□□ 0.03
Ccdc138-201ENSMUST00000036576 Crybg2B7ZCC2 1516 aa15.22■□□□□ 0.03
Ccdc138-201ENSMUST00000036576 1700123L14RikQ3V2K7 440 aa15.17■□□□□ 0.02
Ccdc138-201ENSMUST00000036576 Cngb1E1AZ71 1325 aa15.16■□□□□ 0.02
Ccdc138-201ENSMUST00000036576 BicraF8VPZ9 1578 aa15.15■□□□□ 0.02
Ccdc138-201ENSMUST00000036576 Sall2Q9QX96 1004 aa15.14■□□□□ 0.01
Ccdc138-201ENSMUST00000036576 Anks4bQ8K3X6 423 aa15.1■□□□□ 0.01
Ccdc138-201ENSMUST00000036576 Csrnp3P59055 597 aa15.07■□□□□ 0
Ccdc138-201ENSMUST00000036576 Rsf1E9PWW9 1441 aaKnown RBP15.03■□□□□ -0
Ccdc138-201ENSMUST00000036576 Cecr2E9Q2Z1 1453 aa15.02■□□□□ -0
Ccdc138-201ENSMUST00000036576 Mier1Q5UAK0 511 aa15.02□□□□□ -0.01
Ccdc138-201ENSMUST00000036576 Myt1Q8CFC2 1127 aa14.99□□□□□ -0.01
Ccdc138-201ENSMUST00000036576 CenpbP27790 599 aa14.91□□□□□ -0.02
Ccdc138-201ENSMUST00000036576 Chic1Q8CBW7 227 aa14.9□□□□□ -0.02
Ccdc138-201ENSMUST00000036576 Gab3Q8BSM5 595 aa14.87□□□□□ -0.03
Ccdc138-201ENSMUST00000036576 Brd4Q9ESU6 1400 aaKnown RBP14.86□□□□□ -0.03
Ccdc138-201ENSMUST00000036576 Aplp2Q06335 707 aa14.86□□□□□ -0.03
Ccdc138-201ENSMUST00000036576 Golga3P55937 1487 aa14.85□□□□□ -0.03
Ccdc138-201ENSMUST00000036576 Ccdc88bQ4QRL3 1481 aa14.84□□□□□ -0.03
Ccdc138-201ENSMUST00000036576 Cdk11bP24788 784 aaKnown RBP14.78□□□□□ -0.04
Ccdc138-201ENSMUST00000036576 Aebp2Q9Z248 504 aaKnown RBP14.77□□□□□ -0.04
Ccdc138-201ENSMUST00000036576 Wdr66E9Q743 1299 aa14.76□□□□□ -0.05
Ccdc138-201ENSMUST00000036576 Esf1Q3V1V3 845 aaKnown RBP14.75□□□□□ -0.05
Ccdc138-201ENSMUST00000036576 ClspnQ80YR7 1315 aa14.75□□□□□ -0.05
Ccdc138-201ENSMUST00000036576 Nop58Q6DFW4 536 aaKnown RBP14.74□□□□□ -0.05
Ccdc138-201ENSMUST00000036576 Synj1Q8CHC4 1574 aa14.72□□□□□ -0.05
Ccdc138-201ENSMUST00000036576 Top2bQ64511 1612 aa14.69□□□□□ -0.06
Ccdc138-201ENSMUST00000036576 Gm38655A0A286YDK6 273 aa14.66□□□□□ -0.06
Ccdc138-201ENSMUST00000036576 Ppargc1bQ8VHJ7 1014 aa14.61□□□□□ -0.07
Ccdc138-201ENSMUST00000036576 Smarca4Q3TKT4 1613 aaKnown RBP14.6□□□□□ -0.07
Ccdc138-201ENSMUST00000036576 CftrP26361 1476 aa14.59□□□□□ -0.07
Ccdc138-201ENSMUST00000036576 Rapgef2Q8CHG7 1496 aa14.58□□□□□ -0.07
Ccdc138-201ENSMUST00000036576 UbtfP25976 765 aaKnown RBP14.56□□□□□ -0.08
Ccdc138-201ENSMUST00000036576 Mapk8ip2Q9ERE9 830 aa14.5□□□□□ -0.09
Ccdc138-201ENSMUST00000036576 Iqgap2Q3UQ44 1575 aa14.5□□□□□ -0.09
Ccdc138-201ENSMUST00000036576 TonslQ6NZL6 1363 aa14.5□□□□□ -0.09
Ccdc138-201ENSMUST00000036576 DiexfQ8BTT6 772 aaKnown RBP14.5□□□□□ -0.09
Ccdc138-201ENSMUST00000036576 Cttnbp2B9EJA2 1648 aa14.49□□□□□ -0.09
Ccdc138-201ENSMUST00000036576 Cc2d2aQ8CFW7 1633 aa14.47□□□□□ -0.09
Ccdc138-201ENSMUST00000036576 Atad2bE9Q166 1460 aaKnown RBP14.45□□□□□ -0.1
Ccdc138-201ENSMUST00000036576 Pds5bQ4VA53 1446 aaKnown RBP14.44□□□□□ -0.1
Ccdc138-201ENSMUST00000036576 Top2aQ01320 1528 aaKnown RBP14.43□□□□□ -0.1
Ccdc138-201ENSMUST00000036576 Cep162Q6ZQ06 1403 aa14.41□□□□□ -0.1
Ccdc138-201ENSMUST00000036576 Bcl11aQ9QYE3 773 aa14.4□□□□□ -0.1
Ccdc138-201ENSMUST00000036576 Fam71e1A1L3C1 212 aa14.39□□□□□ -0.11
Ccdc138-201ENSMUST00000036576 Fmn1Q05860 1466 aa14.39□□□□□ -0.11
Ccdc138-201ENSMUST00000036576 Ncapd3Q6ZQK0 1506 aa14.38□□□□□ -0.11
Ccdc138-201ENSMUST00000036576 Tnnt3Q9QZ47 272 aa14.37□□□□□ -0.11
Ccdc138-201ENSMUST00000036576 Dnajc5bQ9CQ94 199 aa14.36□□□□□ -0.11
Ccdc138-201ENSMUST00000036576 Eif4g1Q6NZJ6 1600 aaKnown RBP14.34□□□□□ -0.11
Ccdc138-201ENSMUST00000036576 Hnrnpul2Q00PI9 745 aaKnown RBP14.33□□□□□ -0.12
Ccdc138-201ENSMUST00000036576 SafbD3YXK2 937 aaKnown RBP14.33□□□□□ -0.12
Ccdc138-201ENSMUST00000036576 Frmpd1A2AKB4 1549 aa14.31□□□□□ -0.12
Ccdc138-201ENSMUST00000036576 Il27Q8K3I6 234 aa14.31□□□□□ -0.12
Ccdc138-201ENSMUST00000036576 Ercc6F8VPZ5 1481 aa14.24□□□□□ -0.13
Ccdc138-201ENSMUST00000036576 Clip1Q922J3 1391 aa14.24□□□□□ -0.13
Ccdc138-201ENSMUST00000036576 Wdr62Q3U3T8 1523 aa14.23□□□□□ -0.13
Ccdc138-201ENSMUST00000036576 Kdm5bQ80Y84 1544 aa14.22□□□□□ -0.13
Ccdc138-201ENSMUST00000036576 Ap3b1Q9Z1T1 1105 aa14.17□□□□□ -0.14
Ccdc138-201ENSMUST00000036576 Myt1lP97500 1187 aa14.17□□□□□ -0.14
Ccdc138-201ENSMUST00000036576 Unc13aQ4KUS2 1712 aa14.16□□□□□ -0.14
Ccdc138-201ENSMUST00000036576 Ubl4bQ9CQ84 188 aa14.15□□□□□ -0.14
Ccdc138-201ENSMUST00000036576 TchhA0A0B4J1F9 1599 aa14.15□□□□□ -0.14
Ccdc138-201ENSMUST00000036576 Kif15Q6P9L6 1387 aa14.13□□□□□ -0.15
Ccdc138-201ENSMUST00000036576 Plekhg3Q4VAC9 1341 aa14.12□□□□□ -0.15
Ccdc138-201ENSMUST00000036576 Stra8P70278 393 aa14.11□□□□□ -0.15
Ccdc138-201ENSMUST00000036576 Thoc2B1AZI6 1594 aaKnown RBP14.11□□□□□ -0.15
Ccdc138-201ENSMUST00000036576 Anp32aO35381 247 aa14.09□□□□□ -0.15
Ccdc138-201ENSMUST00000036576 Ccdc18Q640L5 1455 aa14.09□□□□□ -0.15
Ccdc138-201ENSMUST00000036576 Rtl5Q5DTT4 599 aa14.08□□□□□ -0.15
Ccdc138-201ENSMUST00000036576 Npm2Q80W85 207 aa14.07□□□□□ -0.16
Ccdc138-201ENSMUST00000036576 Ifnlr1Q8CGK5 535 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms