RNA–Protein interactions for RNA: ENSMUST00000034065.13

Nek1-201, Transcript of Serine/threonine-protein kinase Nek1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Nek1, Length 5,401 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1-201ENSMUST00000034065 Rhox8Q6VSS7 320 aa23.19■■□□□ 1.3
Nek1-201ENSMUST00000034065 Rpgrip1Q9EPQ2 1331 aa21.41■■□□□ 1.02
Nek1-201ENSMUST00000034065 Ehmt2Q9Z148 1263 aaKnown RBP20.92■□□□□ 0.94
Nek1-201ENSMUST00000034065 Cngb1E1AZ71 1325 aa20.75■□□□□ 0.91
Nek1-201ENSMUST00000034065 Las1lA2BE28 776 aaKnown RBP20.69■□□□□ 0.9
Nek1-201ENSMUST00000034065 Wdr66E9Q743 1299 aa20.5■□□□□ 0.87
Nek1-201ENSMUST00000034065 Ccdc136Q3TVA9 1136 aa20.47■□□□□ 0.87
Nek1-201ENSMUST00000034065 Esf1Q3V1V3 845 aaKnown RBP20.37■□□□□ 0.85
Nek1-201ENSMUST00000034065 Pelp1Q9DBD5 1123 aaKnown RBP20.31■□□□□ 0.84
Nek1-201ENSMUST00000034065 Ube2uB1AUC4 352 aa20.26■□□□□ 0.83
Nek1-201ENSMUST00000034065 Zeb1Q64318 1117 aa20.25■□□□□ 0.83
Nek1-201ENSMUST00000034065 Gab3Q8BSM5 595 aa20.17■□□□□ 0.82
Nek1-201ENSMUST00000034065 Trim41Q5NCC3 630 aa20.07■□□□□ 0.8
Nek1-201ENSMUST00000034065 Npm2Q80W85 207 aa20.01■□□□□ 0.79
Nek1-201ENSMUST00000034065 Myt1lP97500 1187 aa19.86■□□□□ 0.77
Nek1-201ENSMUST00000034065 CenpbP27790 599 aa19.7■□□□□ 0.74
Nek1-201ENSMUST00000034065 Acin1Q9JIX8 1338 aaKnown RBP19.67■□□□□ 0.74
Nek1-201ENSMUST00000034065 NefmP08553 848 aa19.63■□□□□ 0.73
Nek1-201ENSMUST00000034065 Amer1Q7TS75 1132 aa19.54■□□□□ 0.72
Nek1-201ENSMUST00000034065 NischQ80TM9 1593 aa19.52■□□□□ 0.72
Nek1-201ENSMUST00000034065 Stra8P70278 393 aa19.52■□□□□ 0.71
Nek1-201ENSMUST00000034065 UbtfP25976 765 aaKnown RBP19.51■□□□□ 0.71
Nek1-201ENSMUST00000034065 Slc24a1Q91WD8 1130 aa19.36■□□□□ 0.69
Nek1-201ENSMUST00000034065 Cdk11bP24788 784 aaKnown RBP19.18■□□□□ 0.66
Nek1-201ENSMUST00000034065 HrcG5E8J6 738 aa19.16■□□□□ 0.66
Nek1-201ENSMUST00000034065 Il27Q8K3I6 234 aa19.03■□□□□ 0.64
Nek1-201ENSMUST00000034065 Pcgf6Q99NA9 353 aa19.03■□□□□ 0.64
Nek1-201ENSMUST00000034065 Ccdc180J3QNE4 1664 aa19■□□□□ 0.63
Nek1-201ENSMUST00000034065 NrdcQ8BHG1 1161 aa18.98■□□□□ 0.63
Nek1-201ENSMUST00000034065 Tnnt3Q9QZ47 272 aa18.96■□□□□ 0.63
Nek1-201ENSMUST00000034065 Anp32bQ9EST5 272 aaKnown RBP18.95■□□□□ 0.62
Nek1-201ENSMUST00000034065 Nop58Q6DFW4 536 aaKnown RBP18.93■□□□□ 0.62
Nek1-201ENSMUST00000034065 Myt1Q8CFC2 1127 aa18.91■□□□□ 0.62
Nek1-201ENSMUST00000034065 Ttbk1Q6PCN3 1308 aa18.91■□□□□ 0.62
Nek1-201ENSMUST00000034065 Fam50aQ9WV03 339 aaKnown RBP18.9■□□□□ 0.62
Nek1-201ENSMUST00000034065 4930567H17RikQ3V0K5 233 aa18.89■□□□□ 0.61
Nek1-201ENSMUST00000034065 NclP09405 707 aaKnown RBP18.88■□□□□ 0.61
Nek1-201ENSMUST00000034065 4933416C03RikQ3V063 378 aa18.86■□□□□ 0.61
Nek1-201ENSMUST00000034065 Neurod1Q60867 357 aa18.85■□□□□ 0.61
Nek1-201ENSMUST00000034065 NeflP08551 543 aa18.83■□□□□ 0.6
Nek1-201ENSMUST00000034065 Ap3b1Q9Z1T1 1105 aa18.8■□□□□ 0.6
Nek1-201ENSMUST00000034065 Eif5bQ05D44 1216 aaKnown RBP18.77■□□□□ 0.59
Nek1-201ENSMUST00000034065 Ppargc1bQ8VHJ7 1014 aa18.73■□□□□ 0.59
Nek1-201ENSMUST00000034065 Os9Q8K2C7 672 aa18.69■□□□□ 0.58
Nek1-201ENSMUST00000034065 TonslQ6NZL6 1363 aa18.67■□□□□ 0.58
Nek1-201ENSMUST00000034065 Supt5hO55201 1082 aaKnown RBP18.66■□□□□ 0.58
Nek1-201ENSMUST00000034065 Rtl1Q7M732 1744 aa18.61■□□□□ 0.57
Nek1-201ENSMUST00000034065 Zcchc6Q5BLK4 1491 aaKnown RBP18.61■□□□□ 0.57
Nek1-201ENSMUST00000034065 Rtl5Q5DTT4 599 aa18.5■□□□□ 0.55
Nek1-201ENSMUST00000034065 Mier1Q5UAK0 511 aa18.48■□□□□ 0.55
Nek1-201ENSMUST00000034065 ClspnQ80YR7 1315 aa18.3■□□□□ 0.52
Nek1-201ENSMUST00000034065 Abcc9P70170 1546 aa18.28■□□□□ 0.52
Nek1-201ENSMUST00000034065 Lmod2Q3UHZ5 550 aa18.27■□□□□ 0.52
Nek1-201ENSMUST00000034065 Zbtb7cQ8VCZ7 619 aa18.24■□□□□ 0.51
Nek1-201ENSMUST00000034065 Anp32aO35381 247 aa18.24■□□□□ 0.51
Nek1-201ENSMUST00000034065 Plekhg3Q4VAC9 1341 aa18.23■□□□□ 0.51
Nek1-201ENSMUST00000034065 Npm1Q61937 292 aaKnown RBP18.18■□□□□ 0.5
Nek1-201ENSMUST00000034065 Hnrnpul2Q00PI9 745 aaKnown RBP18.18■□□□□ 0.5
Nek1-201ENSMUST00000034065 DaxxO35613 739 aa18.15■□□□□ 0.5
Nek1-201ENSMUST00000034065 Gm35339A0A140LHH9 1649 aa18.14■□□□□ 0.49
Nek1-201ENSMUST00000034065 Zbtb4Q5F293 982 aa18.05■□□□□ 0.48
Nek1-201ENSMUST00000034065 Nlrp6Q91WS2 869 aa18.04■□□□□ 0.48
Nek1-201ENSMUST00000034065 Gm13697A2AK42 830 aa18.04■□□□□ 0.48
Nek1-201ENSMUST00000034065 Mapk8ip2Q9ERE9 830 aa18.02■□□□□ 0.48
Nek1-201ENSMUST00000034065 Chic1Q8CBW7 227 aa18.01■□□□□ 0.47
Nek1-201ENSMUST00000034065 DiexfQ8BTT6 772 aaKnown RBP18■□□□□ 0.47
Nek1-201ENSMUST00000034065 Eid3Q3V124 375 aa17.98■□□□□ 0.47
Nek1-201ENSMUST00000034065 Erich6D3Z6S9 713 aa17.97■□□□□ 0.47
Nek1-201ENSMUST00000034065 Polr3glQ8R0C0 218 aa17.94■□□□□ 0.46
Nek1-201ENSMUST00000034065 Atp1b4Q99ME6 356 aa17.92■□□□□ 0.46
Nek1-201ENSMUST00000034065 Sall2Q9QX96 1004 aa17.92■□□□□ 0.46
Nek1-201ENSMUST00000034065 Ifnlr1Q8CGK5 535 aa17.91■□□□□ 0.46
Nek1-201ENSMUST00000034065 Anks4bQ8K3X6 423 aa17.91■□□□□ 0.46
Nek1-201ENSMUST00000034065 Prdm10Q3UTQ7 1184 aa17.9■□□□□ 0.46
Nek1-201ENSMUST00000034065 Hdac5Q9Z2V6 1113 aa17.89■□□□□ 0.45
Nek1-201ENSMUST00000034065 Gm38655A0A286YDK6 273 aa17.89■□□□□ 0.45
Nek1-201ENSMUST00000034065 Clip1Q922J3 1391 aa17.87■□□□□ 0.45
Nek1-201ENSMUST00000034065 Ccer2J3QPU5 274 aa17.84■□□□□ 0.45
Nek1-201ENSMUST00000034065 ArxO35085 564 aa17.83■□□□□ 0.45
Nek1-201ENSMUST00000034065 Csrnp3P59055 597 aa17.82■□□□□ 0.44
Nek1-201ENSMUST00000034065 Aplp2Q06335 707 aa17.78■□□□□ 0.44
Nek1-201ENSMUST00000034065 Calr4Q3TQS0 420 aa17.76■□□□□ 0.43
Nek1-201ENSMUST00000034065 Gm13695A2AK44 830 aa17.75■□□□□ 0.43
Nek1-201ENSMUST00000034065 Fkbp15Q6P9Q6 1216 aaKnown RBP17.74■□□□□ 0.43
Nek1-201ENSMUST00000034065 Ppp4r2Q0VGB7 417 aa17.73■□□□□ 0.43
Nek1-201ENSMUST00000034065 Upf2A2AT37 1269 aaKnown RBP17.73■□□□□ 0.43
Nek1-201ENSMUST00000034065 Brd4Q9ESU6 1400 aaKnown RBP17.72■□□□□ 0.43
Nek1-201ENSMUST00000034065 Dcaf1Q80TR8 1506 aa17.71■□□□□ 0.43
Nek1-201ENSMUST00000034065 Cep164Q5DU05 1446 aa17.71■□□□□ 0.43
Nek1-201ENSMUST00000034065 Mrs2Q5NCE8 434 aa17.62■□□□□ 0.41
Nek1-201ENSMUST00000034065 Rad21Q61550 635 aaKnown RBP17.62■□□□□ 0.41
Nek1-201ENSMUST00000034065 Wdr43Q6ZQL4 677 aaKnown RBP17.61■□□□□ 0.41
Nek1-201ENSMUST00000034065 Rangap1P46061 589 aaKnown RBP17.58■□□□□ 0.41
Nek1-201ENSMUST00000034065 Chic2Q9D9G3 165 aa17.58■□□□□ 0.4
Nek1-201ENSMUST00000034065 Abcc8B2RUS7 1588 aa17.56■□□□□ 0.4
Nek1-201ENSMUST00000034065 Clstn2Q9ER65 966 aa17.5■□□□□ 0.39
Nek1-201ENSMUST00000034065 CatipB9EKE5 520 aa17.48■□□□□ 0.39
Nek1-201ENSMUST00000034065 BlmO88700 1416 aa17.48■□□□□ 0.39
Nek1-201ENSMUST00000034065 Hsp90aa1P07901 733 aaKnown RBP17.45■□□□□ 0.38
Nek1-201ENSMUST00000034065 Ccdc9Q8VC31 543 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms