RNA–Protein interactions for RNA: ENSMUST00000033544.13

Brcc3-201, Transcript of Lys-63-specific deubiquitinase BRCC36, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Brcc3, Length 4,310 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brcc3-201ENSMUST00000033544 Rhox8Q6VSS7 320 aa17.25■□□□□ 0.35
Brcc3-201ENSMUST00000033544 NischQ80TM9 1593 aa16.99■□□□□ 0.31
Brcc3-201ENSMUST00000033544 Ehmt2Q9Z148 1263 aaKnown RBP16.67■□□□□ 0.26
Brcc3-201ENSMUST00000033544 Rpgrip1Q9EPQ2 1331 aa16.34■□□□□ 0.21
Brcc3-201ENSMUST00000033544 Abcc9P70170 1546 aa16.29■□□□□ 0.2
Brcc3-201ENSMUST00000033544 Acin1Q9JIX8 1338 aaKnown RBP16.11■□□□□ 0.17
Brcc3-201ENSMUST00000033544 Ccdc180J3QNE4 1664 aa16.02■□□□□ 0.16
Brcc3-201ENSMUST00000033544 Ccdc136Q3TVA9 1136 aa15.94■□□□□ 0.14
Brcc3-201ENSMUST00000033544 Pcgf6Q99NA9 353 aa15.94■□□□□ 0.14
Brcc3-201ENSMUST00000033544 Rtl1Q7M732 1744 aa15.93■□□□□ 0.14
Brcc3-201ENSMUST00000033544 Abcc8B2RUS7 1588 aa15.87■□□□□ 0.13
Brcc3-201ENSMUST00000033544 Gm35339A0A140LHH9 1649 aa15.82■□□□□ 0.12
Brcc3-201ENSMUST00000033544 Supt5hO55201 1082 aaKnown RBP15.66■□□□□ 0.1
Brcc3-201ENSMUST00000033544 Trim41Q5NCC3 630 aa15.56■□□□□ 0.08
Brcc3-201ENSMUST00000033544 Zeb1Q64318 1117 aa15.56■□□□□ 0.08
Brcc3-201ENSMUST00000033544 Zcchc6Q5BLK4 1491 aaKnown RBP15.52■□□□□ 0.08
Brcc3-201ENSMUST00000033544 HrcG5E8J6 738 aa15.5■□□□□ 0.07
Brcc3-201ENSMUST00000033544 Neurod1Q60867 357 aa15.4■□□□□ 0.06
Brcc3-201ENSMUST00000033544 Gab3Q8BSM5 595 aa15.39■□□□□ 0.05
Brcc3-201ENSMUST00000033544 Dcaf1Q80TR8 1506 aa15.34■□□□□ 0.05
Brcc3-201ENSMUST00000033544 Cngb1E1AZ71 1325 aa15.24■□□□□ 0.03
Brcc3-201ENSMUST00000033544 Ppargc1bQ8VHJ7 1014 aa15.16■□□□□ 0.02
Brcc3-201ENSMUST00000033544 Wdr66E9Q743 1299 aa15.09■□□□□ 0.01
Brcc3-201ENSMUST00000033544 Sall2Q9QX96 1004 aa15.08■□□□□ 0
Brcc3-201ENSMUST00000033544 Mier1Q5UAK0 511 aa15.04■□□□□ -0
Brcc3-201ENSMUST00000033544 Las1lA2BE28 776 aaKnown RBP15.02□□□□□ -0.01
Brcc3-201ENSMUST00000033544 Csrnp3P59055 597 aa14.99□□□□□ -0.01
Brcc3-201ENSMUST00000033544 Chic1Q8CBW7 227 aa14.97□□□□□ -0.01
Brcc3-201ENSMUST00000033544 Gm38655A0A286YDK6 273 aa14.93□□□□□ -0.02
Brcc3-201ENSMUST00000033544 Rb1cc1Q9ESK9 1588 aa14.93□□□□□ -0.02
Brcc3-201ENSMUST00000033544 UbtfP25976 765 aaKnown RBP14.91□□□□□ -0.02
Brcc3-201ENSMUST00000033544 1700123L14RikQ3V2K7 440 aa14.91□□□□□ -0.02
Brcc3-201ENSMUST00000033544 NefmP08553 848 aa14.91□□□□□ -0.02
Brcc3-201ENSMUST00000033544 Cep164Q5DU05 1446 aa14.85□□□□□ -0.03
Brcc3-201ENSMUST00000033544 Aebp2Q9Z248 504 aaKnown RBP14.79□□□□□ -0.04
Brcc3-201ENSMUST00000033544 Anks4bQ8K3X6 423 aa14.73□□□□□ -0.05
Brcc3-201ENSMUST00000033544 Esf1Q3V1V3 845 aaKnown RBP14.72□□□□□ -0.05
Brcc3-201ENSMUST00000033544 Cdk11bP24788 784 aaKnown RBP14.72□□□□□ -0.05
Brcc3-201ENSMUST00000033544 Nop58Q6DFW4 536 aaKnown RBP14.71□□□□□ -0.05
Brcc3-201ENSMUST00000033544 Myt1lP97500 1187 aa14.71□□□□□ -0.06
Brcc3-201ENSMUST00000033544 Rsf1E9PWW9 1441 aaKnown RBP14.68□□□□□ -0.06
Brcc3-201ENSMUST00000033544 Baz1aO88379 1555 aa14.63□□□□□ -0.07
Brcc3-201ENSMUST00000033544 CenpbP27790 599 aa14.57□□□□□ -0.08
Brcc3-201ENSMUST00000033544 ScribQ80U72 1612 aa14.56□□□□□ -0.08
Brcc3-201ENSMUST00000033544 Ccdc88bQ4QRL3 1481 aa14.53□□□□□ -0.08
Brcc3-201ENSMUST00000033544 Kdm5dQ62240 1548 aa14.51□□□□□ -0.09
Brcc3-201ENSMUST00000033544 ClspnQ80YR7 1315 aa14.48□□□□□ -0.09
Brcc3-201ENSMUST00000033544 Mapk8ip2Q9ERE9 830 aa14.47□□□□□ -0.09
Brcc3-201ENSMUST00000033544 TonslQ6NZL6 1363 aa14.43□□□□□ -0.1
Brcc3-201ENSMUST00000033544 Plekhg3Q4VAC9 1341 aa14.42□□□□□ -0.1
Brcc3-201ENSMUST00000033544 Aplp2Q06335 707 aa14.42□□□□□ -0.1
Brcc3-201ENSMUST00000033544 Npm2Q80W85 207 aa14.41□□□□□ -0.1
Brcc3-201ENSMUST00000033544 Ap3b1Q9Z1T1 1105 aa14.4□□□□□ -0.1
Brcc3-201ENSMUST00000033544 Eid3Q3V124 375 aa14.4□□□□□ -0.1
Brcc3-201ENSMUST00000033544 SafbD3YXK2 937 aaKnown RBP14.37□□□□□ -0.11
Brcc3-201ENSMUST00000033544 Smarca2Q6DIC0 1577 aa14.28□□□□□ -0.12
Brcc3-201ENSMUST00000033544 Hnrnpul2Q00PI9 745 aaKnown RBP14.28□□□□□ -0.12
Brcc3-201ENSMUST00000033544 Fam71e1A1L3C1 212 aa14.27□□□□□ -0.13
Brcc3-201ENSMUST00000033544 Golga3P55937 1487 aa14.25□□□□□ -0.13
Brcc3-201ENSMUST00000033544 NacadQ5SWP3 1504 aa14.25□□□□□ -0.13
Brcc3-201ENSMUST00000033544 Brd4Q9ESU6 1400 aaKnown RBP14.24□□□□□ -0.13
Brcc3-201ENSMUST00000033544 Cecr2E9Q2Z1 1453 aa14.22□□□□□ -0.13
Brcc3-201ENSMUST00000033544 Slc24a1Q91WD8 1130 aa14.21□□□□□ -0.14
Brcc3-201ENSMUST00000033544 Myt1Q8CFC2 1127 aa14.16□□□□□ -0.14
Brcc3-201ENSMUST00000033544 DiexfQ8BTT6 772 aaKnown RBP14.14□□□□□ -0.15
Brcc3-201ENSMUST00000033544 Clip1Q922J3 1391 aa14.09□□□□□ -0.15
Brcc3-201ENSMUST00000033544 Il27Q8K3I6 234 aa14.07□□□□□ -0.16
Brcc3-201ENSMUST00000033544 Synj1Q8CHC4 1574 aa14.05□□□□□ -0.16
Brcc3-201ENSMUST00000033544 NclP09405 707 aaKnown RBP14.05□□□□□ -0.16
Brcc3-201ENSMUST00000033544 Fam50aQ9WV03 339 aaKnown RBP14.04□□□□□ -0.16
Brcc3-201ENSMUST00000033544 Bcl11aQ9QYE3 773 aa14.02□□□□□ -0.16
Brcc3-201ENSMUST00000033544 Tnnt3Q9QZ47 272 aa14□□□□□ -0.17
Brcc3-201ENSMUST00000033544 Ifnlr1Q8CGK5 535 aa13.97□□□□□ -0.17
Brcc3-201ENSMUST00000033544 Ttbk1Q6PCN3 1308 aa13.97□□□□□ -0.17
Brcc3-201ENSMUST00000033544 Ube2uB1AUC4 352 aa13.96□□□□□ -0.17
Brcc3-201ENSMUST00000033544 Eif5bQ05D44 1216 aaKnown RBP13.96□□□□□ -0.17
Brcc3-201ENSMUST00000033544 Cep162Q6ZQ06 1403 aa13.95□□□□□ -0.18
Brcc3-201ENSMUST00000033544 Rapgef2Q8CHG7 1496 aa13.95□□□□□ -0.18
Brcc3-201ENSMUST00000033544 Crybg2B7ZCC2 1516 aa13.95□□□□□ -0.18
Brcc3-201ENSMUST00000033544 Lmod2Q3UHZ5 550 aa13.94□□□□□ -0.18
Brcc3-201ENSMUST00000033544 Sycp2Q9CUU3 1500 aa13.91□□□□□ -0.18
Brcc3-201ENSMUST00000033544 CftrP26361 1476 aa13.9□□□□□ -0.18
Brcc3-201ENSMUST00000033544 Anp32aO35381 247 aa13.88□□□□□ -0.19
Brcc3-201ENSMUST00000033544 Cc2d2aQ8CFW7 1633 aa13.85□□□□□ -0.19
Brcc3-201ENSMUST00000033544 Nolc1E9Q5C9 702 aaKnown RBP13.84□□□□□ -0.19
Brcc3-201ENSMUST00000033544 Calr4Q3TQS0 420 aa13.84□□□□□ -0.19
Brcc3-201ENSMUST00000033544 Stra8P70278 393 aa13.8□□□□□ -0.2
Brcc3-201ENSMUST00000033544 PrkcshO08795 521 aa13.79□□□□□ -0.2
Brcc3-201ENSMUST00000033544 P3h3Q8CG70 732 aa13.78□□□□□ -0.2
Brcc3-201ENSMUST00000033544 Ppp4r2Q0VGB7 417 aa13.78□□□□□ -0.2
Brcc3-201ENSMUST00000033544 Znf710Q3U288 666 aa13.77□□□□□ -0.2
Brcc3-201ENSMUST00000033544 Sin3aQ60520 1274 aaKnown RBP13.77□□□□□ -0.21
Brcc3-201ENSMUST00000033544 Hspa5P20029 655 aaKnown RBP13.76□□□□□ -0.21
Brcc3-201ENSMUST00000033544 Ncapd3Q6ZQK0 1506 aa13.75□□□□□ -0.21
Brcc3-201ENSMUST00000033544 Setd5Q5XJV7 1441 aa13.73□□□□□ -0.21
Brcc3-201ENSMUST00000033544 BlmO88700 1416 aa13.71□□□□□ -0.22
Brcc3-201ENSMUST00000033544 Top2bQ64511 1612 aa13.7□□□□□ -0.22
Brcc3-201ENSMUST00000033544 Fmn1Q05860 1466 aa13.69□□□□□ -0.22
Brcc3-201ENSMUST00000033544 Pelp1Q9DBD5 1123 aaKnown RBP13.67□□□□□ -0.22
Brcc3-201ENSMUST00000033544 Rpap1Q80TE0 1409 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms