RNA–Protein interactions for RNA: ENSMUST00000033236.8

Thumpd1-201, Transcript of THUMP domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Thumpd1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1-201ENSMUST00000033236 Rpgrip1Q9EPQ2 1331 aa24.68■■□□□ 1.54
Thumpd1-201ENSMUST00000033236 NischQ80TM9 1593 aa24.33■■□□□ 1.49
Thumpd1-201ENSMUST00000033236 Rtl1Q7M732 1744 aa24.2■■□□□ 1.47
Thumpd1-201ENSMUST00000033236 Ccdc180J3QNE4 1664 aa23.96■■□□□ 1.43
Thumpd1-201ENSMUST00000033236 Acin1Q9JIX8 1338 aaKnown RBP23.73■■□□□ 1.39
Thumpd1-201ENSMUST00000033236 Abcc9P70170 1546 aa23.68■■□□□ 1.38
Thumpd1-201ENSMUST00000033236 Rhox8Q6VSS7 320 aa23.57■■□□□ 1.36
Thumpd1-201ENSMUST00000033236 Gm35339A0A140LHH9 1649 aa23.46■■□□□ 1.35
Thumpd1-201ENSMUST00000033236 Pcgf6Q99NA9 353 aa23.33■■□□□ 1.33
Thumpd1-201ENSMUST00000033236 Zcchc6Q5BLK4 1491 aaKnown RBP22.96■■□□□ 1.27
Thumpd1-201ENSMUST00000033236 Dcaf1Q80TR8 1506 aa22.95■■□□□ 1.26
Thumpd1-201ENSMUST00000033236 Ehmt2Q9Z148 1263 aaKnown RBP22.9■■□□□ 1.26
Thumpd1-201ENSMUST00000033236 Abcc8B2RUS7 1588 aa22.82■■□□□ 1.24
Thumpd1-201ENSMUST00000033236 Trim41Q5NCC3 630 aa22.66■■□□□ 1.22
Thumpd1-201ENSMUST00000033236 HrcG5E8J6 738 aa22.64■■□□□ 1.21
Thumpd1-201ENSMUST00000033236 Supt5hO55201 1082 aaKnown RBP22.59■■□□□ 1.21
Thumpd1-201ENSMUST00000033236 Las1lA2BE28 776 aaKnown RBP22.52■■□□□ 1.2
Thumpd1-201ENSMUST00000033236 Neurod1Q60867 357 aa22.51■■□□□ 1.19
Thumpd1-201ENSMUST00000033236 Myt1Q8CFC2 1127 aa22.09■■□□□ 1.13
Thumpd1-201ENSMUST00000033236 1700123L14RikQ3V2K7 440 aa22.01■■□□□ 1.11
Thumpd1-201ENSMUST00000033236 CenpbP27790 599 aa21.93■■□□□ 1.1
Thumpd1-201ENSMUST00000033236 Anks4bQ8K3X6 423 aa21.91■■□□□ 1.1
Thumpd1-201ENSMUST00000033236 Zeb1Q64318 1117 aa21.84■■□□□ 1.09
Thumpd1-201ENSMUST00000033236 Cngb1E1AZ71 1325 aa21.8■■□□□ 1.08
Thumpd1-201ENSMUST00000033236 Csrnp3P59055 597 aa21.78■■□□□ 1.08
Thumpd1-201ENSMUST00000033236 NefmP08553 848 aa21.77■■□□□ 1.08
Thumpd1-201ENSMUST00000033236 ScribQ80U72 1612 aa21.76■■□□□ 1.07
Thumpd1-201ENSMUST00000033236 Ccdc136Q3TVA9 1136 aa21.71■■□□□ 1.07
Thumpd1-201ENSMUST00000033236 Sall2Q9QX96 1004 aa21.71■■□□□ 1.07
Thumpd1-201ENSMUST00000033236 Cep164Q5DU05 1446 aa21.66■■□□□ 1.06
Thumpd1-201ENSMUST00000033236 Aplp2Q06335 707 aa21.65■■□□□ 1.06
Thumpd1-201ENSMUST00000033236 DiexfQ8BTT6 772 aaKnown RBP21.44■■□□□ 1.02
Thumpd1-201ENSMUST00000033236 Mier1Q5UAK0 511 aa21.42■■□□□ 1.02
Thumpd1-201ENSMUST00000033236 Rb1cc1Q9ESK9 1588 aa21.41■■□□□ 1.02
Thumpd1-201ENSMUST00000033236 Cdk11bP24788 784 aaKnown RBP21.36■■□□□ 1.01
Thumpd1-201ENSMUST00000033236 Nop58Q6DFW4 536 aaKnown RBP21.26■□□□□ 0.99
Thumpd1-201ENSMUST00000033236 Baz1aO88379 1555 aa21.19■□□□□ 0.98
Thumpd1-201ENSMUST00000033236 Wdr66E9Q743 1299 aa21.19■□□□□ 0.98
Thumpd1-201ENSMUST00000033236 Bcl11aQ9QYE3 773 aa21.16■□□□□ 0.98
Thumpd1-201ENSMUST00000033236 ClspnQ80YR7 1315 aa21.14■□□□□ 0.97
Thumpd1-201ENSMUST00000033236 Kdm5dQ62240 1548 aa21.12■□□□□ 0.97
Thumpd1-201ENSMUST00000033236 Aebp2Q9Z248 504 aaKnown RBP21.09■□□□□ 0.97
Thumpd1-201ENSMUST00000033236 Gm38655A0A286YDK6 273 aa21.04■□□□□ 0.96
Thumpd1-201ENSMUST00000033236 NacadQ5SWP3 1504 aa21.01■□□□□ 0.95
Thumpd1-201ENSMUST00000033236 Gab3Q8BSM5 595 aa20.96■□□□□ 0.95
Thumpd1-201ENSMUST00000033236 Rsf1E9PWW9 1441 aaKnown RBP20.94■□□□□ 0.94
Thumpd1-201ENSMUST00000033236 Chic1Q8CBW7 227 aa20.88■□□□□ 0.93
Thumpd1-201ENSMUST00000033236 Fam71e1A1L3C1 212 aa20.85■□□□□ 0.93
Thumpd1-201ENSMUST00000033236 Smarca2Q6DIC0 1577 aa20.79■□□□□ 0.92
Thumpd1-201ENSMUST00000033236 Ppargc1bQ8VHJ7 1014 aa20.74■□□□□ 0.91
Thumpd1-201ENSMUST00000033236 Tnnt3Q9QZ47 272 aa20.73■□□□□ 0.91
Thumpd1-201ENSMUST00000033236 UbtfP25976 765 aaKnown RBP20.66■□□□□ 0.9
Thumpd1-201ENSMUST00000033236 TonslQ6NZL6 1363 aa20.66■□□□□ 0.9
Thumpd1-201ENSMUST00000033236 Ccdc88bQ4QRL3 1481 aa20.64■□□□□ 0.89
Thumpd1-201ENSMUST00000033236 Sycp2Q9CUU3 1500 aa20.62■□□□□ 0.89
Thumpd1-201ENSMUST00000033236 Hnrnpul2Q00PI9 745 aaKnown RBP20.6■□□□□ 0.89
Thumpd1-201ENSMUST00000033236 Mapk8ip2Q9ERE9 830 aa20.59■□□□□ 0.89
Thumpd1-201ENSMUST00000033236 SafbD3YXK2 937 aaKnown RBP20.58■□□□□ 0.88
Thumpd1-201ENSMUST00000033236 Crybg2B7ZCC2 1516 aa20.57■□□□□ 0.88
Thumpd1-201ENSMUST00000033236 PrkcshO08795 521 aa20.54■□□□□ 0.88
Thumpd1-201ENSMUST00000033236 Rtl5Q5DTT4 599 aa20.5■□□□□ 0.87
Thumpd1-201ENSMUST00000033236 Golga3P55937 1487 aa20.49■□□□□ 0.87
Thumpd1-201ENSMUST00000033236 Anp32aO35381 247 aa20.47■□□□□ 0.87
Thumpd1-201ENSMUST00000033236 Ifnlr1Q8CGK5 535 aa20.4■□□□□ 0.86
Thumpd1-201ENSMUST00000033236 Brd4Q9ESU6 1400 aaKnown RBP20.38■□□□□ 0.85
Thumpd1-201ENSMUST00000033236 BicraF8VPZ9 1578 aa20.37■□□□□ 0.85
Thumpd1-201ENSMUST00000033236 Pelp1Q9DBD5 1123 aaKnown RBP20.3■□□□□ 0.84
Thumpd1-201ENSMUST00000033236 Ap3b1Q9Z1T1 1105 aa20.25■□□□□ 0.83
Thumpd1-201ENSMUST00000033236 Amer1Q7TS75 1132 aa20.22■□□□□ 0.83
Thumpd1-201ENSMUST00000033236 Rapgef2Q8CHG7 1496 aa20.22■□□□□ 0.83
Thumpd1-201ENSMUST00000033236 Stra8P70278 393 aa20.2■□□□□ 0.82
Thumpd1-201ENSMUST00000033236 Znf710Q3U288 666 aa20.17■□□□□ 0.82
Thumpd1-201ENSMUST00000033236 Ncapd3Q6ZQK0 1506 aa20.16■□□□□ 0.82
Thumpd1-201ENSMUST00000033236 Nolc1E9Q5C9 702 aaKnown RBP20.11■□□□□ 0.81
Thumpd1-201ENSMUST00000033236 Top2bQ64511 1612 aa20.1■□□□□ 0.81
Thumpd1-201ENSMUST00000033236 Synj1Q8CHC4 1574 aa20.08■□□□□ 0.8
Thumpd1-201ENSMUST00000033236 Calr4Q3TQS0 420 aa20.06■□□□□ 0.8
Thumpd1-201ENSMUST00000033236 Cep162Q6ZQ06 1403 aa20.02■□□□□ 0.8
Thumpd1-201ENSMUST00000033236 Supt16hQ920B9 1047 aa20.01■□□□□ 0.79
Thumpd1-201ENSMUST00000033236 Rpap1Q80TE0 1409 aa20■□□□□ 0.79
Thumpd1-201ENSMUST00000033236 Cecr2E9Q2Z1 1453 aa19.99■□□□□ 0.79
Thumpd1-201ENSMUST00000033236 Hdac5Q9Z2V6 1113 aa19.97■□□□□ 0.79
Thumpd1-201ENSMUST00000033236 Myt1lP97500 1187 aa19.96■□□□□ 0.79
Thumpd1-201ENSMUST00000033236 Esf1Q3V1V3 845 aaKnown RBP19.94■□□□□ 0.78
Thumpd1-201ENSMUST00000033236 Clip1Q922J3 1391 aa19.92■□□□□ 0.78
Thumpd1-201ENSMUST00000033236 Plekhg3Q4VAC9 1341 aa19.92■□□□□ 0.78
Thumpd1-201ENSMUST00000033236 Cc2d2aQ8CFW7 1633 aa19.89■□□□□ 0.77
Thumpd1-201ENSMUST00000033236 Kdm5bQ80Y84 1544 aa19.88■□□□□ 0.77
Thumpd1-201ENSMUST00000033236 Dnajc5bQ9CQ94 199 aa19.88■□□□□ 0.77
Thumpd1-201ENSMUST00000033236 Eid3Q3V124 375 aa19.87■□□□□ 0.77
Thumpd1-201ENSMUST00000033236 Top2aQ01320 1528 aaKnown RBP19.85■□□□□ 0.77
Thumpd1-201ENSMUST00000033236 CftrP26361 1476 aa19.83■□□□□ 0.76
Thumpd1-201ENSMUST00000033236 Upf2A2AT37 1269 aaKnown RBP19.79■□□□□ 0.76
Thumpd1-201ENSMUST00000033236 Washc2Q6PGL7 1334 aa19.79■□□□□ 0.76
Thumpd1-201ENSMUST00000033236 Wdr43Q6ZQL4 677 aaKnown RBP19.79■□□□□ 0.76
Thumpd1-201ENSMUST00000033236 Ppp4r2Q0VGB7 417 aa19.77■□□□□ 0.75
Thumpd1-201ENSMUST00000033236 Fmn1Q05860 1466 aa19.76■□□□□ 0.75
Thumpd1-201ENSMUST00000033236 Ccdc27Q3V036 639 aa19.75■□□□□ 0.75
Thumpd1-201ENSMUST00000033236 Ccdc9Q8VC31 543 aaKnown RBP19.74■□□□□ 0.75
Thumpd1-201ENSMUST00000033236 Ttbk1Q6PCN3 1308 aa19.72■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms