RNA–Protein interactions for RNA: ENSMUST00000030637.13

Ncdn-201, Transcript of Neurochondrin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncdn, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncdn-201ENSMUST00000030637 NischQ80TM9 1593 aa20.53■□□□□ 0.88
Ncdn-201ENSMUST00000030637 Rhox8Q6VSS7 320 aa20.17■□□□□ 0.82
Ncdn-201ENSMUST00000030637 Abcc9P70170 1546 aa19.68■□□□□ 0.74
Ncdn-201ENSMUST00000030637 Gm35339A0A140LHH9 1649 aa19.44■□□□□ 0.7
Ncdn-201ENSMUST00000030637 Abcc8B2RUS7 1588 aa19.35■□□□□ 0.69
Ncdn-201ENSMUST00000030637 Ccdc136Q3TVA9 1136 aa18.66■□□□□ 0.58
Ncdn-201ENSMUST00000030637 Ehmt2Q9Z148 1263 aaKnown RBP18.3■□□□□ 0.52
Ncdn-201ENSMUST00000030637 Rtl1Q7M732 1744 aa18.2■□□□□ 0.5
Ncdn-201ENSMUST00000030637 Ccdc180J3QNE4 1664 aa18.17■□□□□ 0.5
Ncdn-201ENSMUST00000030637 Rpgrip1Q9EPQ2 1331 aa18.15■□□□□ 0.5
Ncdn-201ENSMUST00000030637 Rb1cc1Q9ESK9 1588 aa17.98■□□□□ 0.47
Ncdn-201ENSMUST00000030637 ScribQ80U72 1612 aa17.96■□□□□ 0.47
Ncdn-201ENSMUST00000030637 Zcchc6Q5BLK4 1491 aaKnown RBP17.96■□□□□ 0.47
Ncdn-201ENSMUST00000030637 Trim41Q5NCC3 630 aa17.95■□□□□ 0.46
Ncdn-201ENSMUST00000030637 Cngb1E1AZ71 1325 aa17.86■□□□□ 0.45
Ncdn-201ENSMUST00000030637 Kdm5dQ62240 1548 aa17.82■□□□□ 0.44
Ncdn-201ENSMUST00000030637 Gab3Q8BSM5 595 aa17.74■□□□□ 0.43
Ncdn-201ENSMUST00000030637 HrcG5E8J6 738 aa17.73■□□□□ 0.43
Ncdn-201ENSMUST00000030637 Dcaf1Q80TR8 1506 aa17.71■□□□□ 0.43
Ncdn-201ENSMUST00000030637 NacadQ5SWP3 1504 aa17.68■□□□□ 0.42
Ncdn-201ENSMUST00000030637 Esf1Q3V1V3 845 aaKnown RBP17.66■□□□□ 0.42
Ncdn-201ENSMUST00000030637 Baz1aO88379 1555 aa17.65■□□□□ 0.42
Ncdn-201ENSMUST00000030637 Pcgf6Q99NA9 353 aa17.54■□□□□ 0.4
Ncdn-201ENSMUST00000030637 Acin1Q9JIX8 1338 aaKnown RBP17.43■□□□□ 0.38
Ncdn-201ENSMUST00000030637 Chic1Q8CBW7 227 aa17.38■□□□□ 0.37
Ncdn-201ENSMUST00000030637 Sycp2Q9CUU3 1500 aa17.25■□□□□ 0.35
Ncdn-201ENSMUST00000030637 Las1lA2BE28 776 aaKnown RBP17.22■□□□□ 0.35
Ncdn-201ENSMUST00000030637 Cecr2E9Q2Z1 1453 aa17.15■□□□□ 0.34
Ncdn-201ENSMUST00000030637 Smarca2Q6DIC0 1577 aa17.15■□□□□ 0.34
Ncdn-201ENSMUST00000030637 Myt1lP97500 1187 aa17.15■□□□□ 0.34
Ncdn-201ENSMUST00000030637 Brd4Q9ESU6 1400 aaKnown RBP17.14■□□□□ 0.34
Ncdn-201ENSMUST00000030637 Cep164Q5DU05 1446 aa17.11■□□□□ 0.33
Ncdn-201ENSMUST00000030637 Crybg2B7ZCC2 1516 aa17.07■□□□□ 0.32
Ncdn-201ENSMUST00000030637 Rsf1E9PWW9 1441 aaKnown RBP17.07■□□□□ 0.32
Ncdn-201ENSMUST00000030637 Supt5hO55201 1082 aaKnown RBP17.03■□□□□ 0.32
Ncdn-201ENSMUST00000030637 Npm2Q80W85 207 aa17.02■□□□□ 0.32
Ncdn-201ENSMUST00000030637 Zeb1Q64318 1117 aa17■□□□□ 0.31
Ncdn-201ENSMUST00000030637 Neurod1Q60867 357 aa16.98■□□□□ 0.31
Ncdn-201ENSMUST00000030637 Ccdc88bQ4QRL3 1481 aa16.97■□□□□ 0.31
Ncdn-201ENSMUST00000030637 UbtfP25976 765 aaKnown RBP16.95■□□□□ 0.3
Ncdn-201ENSMUST00000030637 Il27Q8K3I6 234 aa16.94■□□□□ 0.3
Ncdn-201ENSMUST00000030637 Golga3P55937 1487 aa16.91■□□□□ 0.3
Ncdn-201ENSMUST00000030637 CenpbP27790 599 aa16.85■□□□□ 0.29
Ncdn-201ENSMUST00000030637 Synj1Q8CHC4 1574 aa16.85■□□□□ 0.29
Ncdn-201ENSMUST00000030637 BicraF8VPZ9 1578 aa16.79■□□□□ 0.28
Ncdn-201ENSMUST00000030637 CftrP26361 1476 aa16.79■□□□□ 0.28
Ncdn-201ENSMUST00000030637 Mier1Q5UAK0 511 aa16.78■□□□□ 0.28
Ncdn-201ENSMUST00000030637 DiexfQ8BTT6 772 aaKnown RBP16.75■□□□□ 0.27
Ncdn-201ENSMUST00000030637 Ap3b1Q9Z1T1 1105 aa16.68■□□□□ 0.26
Ncdn-201ENSMUST00000030637 Plekhg3Q4VAC9 1341 aa16.62■□□□□ 0.25
Ncdn-201ENSMUST00000030637 1700123L14RikQ3V2K7 440 aa16.62■□□□□ 0.25
Ncdn-201ENSMUST00000030637 Wdr66E9Q743 1299 aa16.6■□□□□ 0.25
Ncdn-201ENSMUST00000030637 Csrnp3P59055 597 aa16.58■□□□□ 0.25
Ncdn-201ENSMUST00000030637 NefmP08553 848 aa16.57■□□□□ 0.24
Ncdn-201ENSMUST00000030637 Myt1Q8CFC2 1127 aa16.56■□□□□ 0.24
Ncdn-201ENSMUST00000030637 Ppargc1bQ8VHJ7 1014 aa16.56■□□□□ 0.24
Ncdn-201ENSMUST00000030637 Smarca4Q3TKT4 1613 aaKnown RBP16.52■□□□□ 0.23
Ncdn-201ENSMUST00000030637 Gm38655A0A286YDK6 273 aa16.46■□□□□ 0.23
Ncdn-201ENSMUST00000030637 Cttnbp2B9EJA2 1648 aa16.46■□□□□ 0.22
Ncdn-201ENSMUST00000030637 Clip1Q922J3 1391 aa16.4■□□□□ 0.22
Ncdn-201ENSMUST00000030637 Cc2d2aQ8CFW7 1633 aa16.39■□□□□ 0.21
Ncdn-201ENSMUST00000030637 Fmn1Q05860 1466 aa16.38■□□□□ 0.21
Ncdn-201ENSMUST00000030637 Kif15Q6P9L6 1387 aa16.37■□□□□ 0.21
Ncdn-201ENSMUST00000030637 Iqgap2Q3UQ44 1575 aa16.36■□□□□ 0.21
Ncdn-201ENSMUST00000030637 Rapgef2Q8CHG7 1496 aa16.35■□□□□ 0.21
Ncdn-201ENSMUST00000030637 Atad2bE9Q166 1460 aaKnown RBP16.34■□□□□ 0.21
Ncdn-201ENSMUST00000030637 Pds5bQ4VA53 1446 aaKnown RBP16.34■□□□□ 0.21
Ncdn-201ENSMUST00000030637 Cep162Q6ZQ06 1403 aa16.33■□□□□ 0.21
Ncdn-201ENSMUST00000030637 Npm1Q61937 292 aaKnown RBP16.32■□□□□ 0.2
Ncdn-201ENSMUST00000030637 Ubl4bQ9CQ84 188 aa16.32■□□□□ 0.2
Ncdn-201ENSMUST00000030637 Lmod2Q3UHZ5 550 aa16.31■□□□□ 0.2
Ncdn-201ENSMUST00000030637 Sall2Q9QX96 1004 aa16.31■□□□□ 0.2
Ncdn-201ENSMUST00000030637 Top2bQ64511 1612 aa16.28■□□□□ 0.2
Ncdn-201ENSMUST00000030637 Eid3Q3V124 375 aa16.27■□□□□ 0.2
Ncdn-201ENSMUST00000030637 Bcl11aQ9QYE3 773 aa16.25■□□□□ 0.19
Ncdn-201ENSMUST00000030637 Fam50aQ9WV03 339 aaKnown RBP16.24■□□□□ 0.19
Ncdn-201ENSMUST00000030637 Anks4bQ8K3X6 423 aa16.24■□□□□ 0.19
Ncdn-201ENSMUST00000030637 Ube2uB1AUC4 352 aa16.22■□□□□ 0.19
Ncdn-201ENSMUST00000030637 Aebp2Q9Z248 504 aaKnown RBP16.19■□□□□ 0.18
Ncdn-201ENSMUST00000030637 Ercc6F8VPZ5 1481 aa16.18■□□□□ 0.18
Ncdn-201ENSMUST00000030637 Cdk11bP24788 784 aaKnown RBP16.17■□□□□ 0.18
Ncdn-201ENSMUST00000030637 TonslQ6NZL6 1363 aa16.16■□□□□ 0.18
Ncdn-201ENSMUST00000030637 Top2aQ01320 1528 aaKnown RBP16.16■□□□□ 0.18
Ncdn-201ENSMUST00000030637 Setd5Q5XJV7 1441 aa16.14■□□□□ 0.17
Ncdn-201ENSMUST00000030637 Amer1Q7TS75 1132 aa16.13■□□□□ 0.17
Ncdn-201ENSMUST00000030637 Frmpd1A2AKB4 1549 aa16.11■□□□□ 0.17
Ncdn-201ENSMUST00000030637 Aplp2Q06335 707 aa16.1■□□□□ 0.17
Ncdn-201ENSMUST00000030637 Nop58Q6DFW4 536 aaKnown RBP16.08■□□□□ 0.16
Ncdn-201ENSMUST00000030637 PtprkP35822 1457 aa16.08■□□□□ 0.16
Ncdn-201ENSMUST00000030637 BlmO88700 1416 aa16.04■□□□□ 0.16
Ncdn-201ENSMUST00000030637 Eea1Q8BL66 1411 aa16.04■□□□□ 0.16
Ncdn-201ENSMUST00000030637 Ccdc18Q640L5 1455 aa16.02■□□□□ 0.16
Ncdn-201ENSMUST00000030637 Mapk8ip2Q9ERE9 830 aa16.02■□□□□ 0.15
Ncdn-201ENSMUST00000030637 Cux2P70298 1426 aa16■□□□□ 0.15
Ncdn-201ENSMUST00000030637 Arhgap35Q91YM2 1499 aa15.95■□□□□ 0.14
Ncdn-201ENSMUST00000030637 Wdr62Q3U3T8 1523 aa15.94■□□□□ 0.14
Ncdn-201ENSMUST00000030637 PrkcshO08795 521 aa15.94■□□□□ 0.14
Ncdn-201ENSMUST00000030637 ClspnQ80YR7 1315 aa15.93■□□□□ 0.14
Ncdn-201ENSMUST00000030637 Baz1bQ9Z277 1479 aa15.92■□□□□ 0.14
Ncdn-201ENSMUST00000030637 Phldb1Q6PDH0 1371 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms