RNA–Protein interactions for RNA: ENSMUST00000025956.12

Pde6c-201, Transcript of Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pde6c, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6c-201ENSMUST00000025956 NischQ80TM9 1593 aa21.79■■□□□ 1.08
Pde6c-201ENSMUST00000025956 Abcc9P70170 1546 aa21.17■□□□□ 0.98
Pde6c-201ENSMUST00000025956 Gm35339A0A140LHH9 1649 aa21.1■□□□□ 0.97
Pde6c-201ENSMUST00000025956 Rtl1Q7M732 1744 aa20.82■□□□□ 0.92
Pde6c-201ENSMUST00000025956 Rhox8Q6VSS7 320 aa20.77■□□□□ 0.91
Pde6c-201ENSMUST00000025956 Ccdc180J3QNE4 1664 aa20.59■□□□□ 0.89
Pde6c-201ENSMUST00000025956 Abcc8B2RUS7 1588 aa20.55■□□□□ 0.88
Pde6c-201ENSMUST00000025956 Rpgrip1Q9EPQ2 1331 aa20.51■□□□□ 0.87
Pde6c-201ENSMUST00000025956 Zcchc6Q5BLK4 1491 aaKnown RBP20.01■□□□□ 0.79
Pde6c-201ENSMUST00000025956 Acin1Q9JIX8 1338 aaKnown RBP20■□□□□ 0.79
Pde6c-201ENSMUST00000025956 Ehmt2Q9Z148 1263 aaKnown RBP19.64■□□□□ 0.73
Pde6c-201ENSMUST00000025956 HrcG5E8J6 738 aa19.61■□□□□ 0.73
Pde6c-201ENSMUST00000025956 Dcaf1Q80TR8 1506 aa19.59■□□□□ 0.73
Pde6c-201ENSMUST00000025956 Pcgf6Q99NA9 353 aa19.51■□□□□ 0.71
Pde6c-201ENSMUST00000025956 Ccdc136Q3TVA9 1136 aa19.23■□□□□ 0.67
Pde6c-201ENSMUST00000025956 Rb1cc1Q9ESK9 1588 aa19.12■□□□□ 0.65
Pde6c-201ENSMUST00000025956 Trim41Q5NCC3 630 aa19.09■□□□□ 0.65
Pde6c-201ENSMUST00000025956 Supt5hO55201 1082 aaKnown RBP19.03■□□□□ 0.64
Pde6c-201ENSMUST00000025956 Baz1aO88379 1555 aa18.91■□□□□ 0.62
Pde6c-201ENSMUST00000025956 ScribQ80U72 1612 aa18.89■□□□□ 0.61
Pde6c-201ENSMUST00000025956 Cep164Q5DU05 1446 aa18.84■□□□□ 0.61
Pde6c-201ENSMUST00000025956 Neurod1Q60867 357 aa18.79■□□□□ 0.6
Pde6c-201ENSMUST00000025956 Kdm5dQ62240 1548 aa18.66■□□□□ 0.58
Pde6c-201ENSMUST00000025956 Zeb1Q64318 1117 aa18.57■□□□□ 0.56
Pde6c-201ENSMUST00000025956 Smarca2Q6DIC0 1577 aa18.53■□□□□ 0.56
Pde6c-201ENSMUST00000025956 NefmP08553 848 aa18.52■□□□□ 0.56
Pde6c-201ENSMUST00000025956 Las1lA2BE28 776 aaKnown RBP18.45■□□□□ 0.54
Pde6c-201ENSMUST00000025956 Chic1Q8CBW7 227 aa18.44■□□□□ 0.54
Pde6c-201ENSMUST00000025956 Crybg2B7ZCC2 1516 aa18.43■□□□□ 0.54
Pde6c-201ENSMUST00000025956 Cngb1E1AZ71 1325 aa18.43■□□□□ 0.54
Pde6c-201ENSMUST00000025956 Rsf1E9PWW9 1441 aaKnown RBP18.43■□□□□ 0.54
Pde6c-201ENSMUST00000025956 Mier1Q5UAK0 511 aa18.43■□□□□ 0.54
Pde6c-201ENSMUST00000025956 NacadQ5SWP3 1504 aa18.42■□□□□ 0.54
Pde6c-201ENSMUST00000025956 Sall2Q9QX96 1004 aa18.41■□□□□ 0.54
Pde6c-201ENSMUST00000025956 Gab3Q8BSM5 595 aa18.4■□□□□ 0.54
Pde6c-201ENSMUST00000025956 Anks4bQ8K3X6 423 aa18.29■□□□□ 0.52
Pde6c-201ENSMUST00000025956 1700123L14RikQ3V2K7 440 aa18.24■□□□□ 0.51
Pde6c-201ENSMUST00000025956 Ccdc88bQ4QRL3 1481 aa18.23■□□□□ 0.51
Pde6c-201ENSMUST00000025956 Csrnp3P59055 597 aa18.16■□□□□ 0.5
Pde6c-201ENSMUST00000025956 Brd4Q9ESU6 1400 aaKnown RBP18.13■□□□□ 0.49
Pde6c-201ENSMUST00000025956 Golga3P55937 1487 aa18.12■□□□□ 0.49
Pde6c-201ENSMUST00000025956 Aebp2Q9Z248 504 aaKnown RBP18.05■□□□□ 0.48
Pde6c-201ENSMUST00000025956 Sycp2Q9CUU3 1500 aa18.01■□□□□ 0.47
Pde6c-201ENSMUST00000025956 Wdr66E9Q743 1299 aa18.01■□□□□ 0.47
Pde6c-201ENSMUST00000025956 Cecr2E9Q2Z1 1453 aa18■□□□□ 0.47
Pde6c-201ENSMUST00000025956 Cdk11bP24788 784 aaKnown RBP17.96■□□□□ 0.47
Pde6c-201ENSMUST00000025956 UbtfP25976 765 aaKnown RBP17.94■□□□□ 0.46
Pde6c-201ENSMUST00000025956 Synj1Q8CHC4 1574 aa17.94■□□□□ 0.46
Pde6c-201ENSMUST00000025956 ClspnQ80YR7 1315 aa17.93■□□□□ 0.46
Pde6c-201ENSMUST00000025956 Nop58Q6DFW4 536 aaKnown RBP17.93■□□□□ 0.46
Pde6c-201ENSMUST00000025956 Aplp2Q06335 707 aa17.92■□□□□ 0.46
Pde6c-201ENSMUST00000025956 Top2bQ64511 1612 aa17.83■□□□□ 0.44
Pde6c-201ENSMUST00000025956 CenpbP27790 599 aa17.82■□□□□ 0.44
Pde6c-201ENSMUST00000025956 Myt1Q8CFC2 1127 aa17.82■□□□□ 0.44
Pde6c-201ENSMUST00000025956 Esf1Q3V1V3 845 aaKnown RBP17.8■□□□□ 0.44
Pde6c-201ENSMUST00000025956 Ppargc1bQ8VHJ7 1014 aa17.79■□□□□ 0.44
Pde6c-201ENSMUST00000025956 CftrP26361 1476 aa17.77■□□□□ 0.44
Pde6c-201ENSMUST00000025956 Rapgef2Q8CHG7 1496 aa17.77■□□□□ 0.43
Pde6c-201ENSMUST00000025956 TonslQ6NZL6 1363 aa17.72■□□□□ 0.43
Pde6c-201ENSMUST00000025956 Cc2d2aQ8CFW7 1633 aa17.65■□□□□ 0.42
Pde6c-201ENSMUST00000025956 Gm38655A0A286YDK6 273 aa17.64■□□□□ 0.41
Pde6c-201ENSMUST00000025956 Cep162Q6ZQ06 1403 aa17.62■□□□□ 0.41
Pde6c-201ENSMUST00000025956 Cttnbp2B9EJA2 1648 aa17.6■□□□□ 0.41
Pde6c-201ENSMUST00000025956 Myt1lP97500 1187 aa17.59■□□□□ 0.41
Pde6c-201ENSMUST00000025956 BicraF8VPZ9 1578 aa17.57■□□□□ 0.4
Pde6c-201ENSMUST00000025956 Top2aQ01320 1528 aaKnown RBP17.56■□□□□ 0.4
Pde6c-201ENSMUST00000025956 Fmn1Q05860 1466 aa17.53■□□□□ 0.4
Pde6c-201ENSMUST00000025956 Ncapd3Q6ZQK0 1506 aa17.5■□□□□ 0.39
Pde6c-201ENSMUST00000025956 Plekhg3Q4VAC9 1341 aa17.47■□□□□ 0.39
Pde6c-201ENSMUST00000025956 Clip1Q922J3 1391 aa17.47■□□□□ 0.39
Pde6c-201ENSMUST00000025956 Npm2Q80W85 207 aa17.39■□□□□ 0.38
Pde6c-201ENSMUST00000025956 Hnrnpul2Q00PI9 745 aaKnown RBP17.39■□□□□ 0.37
Pde6c-201ENSMUST00000025956 Eif4g1Q6NZJ6 1600 aaKnown RBP17.37■□□□□ 0.37
Pde6c-201ENSMUST00000025956 Tnnt3Q9QZ47 272 aa17.35■□□□□ 0.37
Pde6c-201ENSMUST00000025956 Smarca4Q3TKT4 1613 aaKnown RBP17.34■□□□□ 0.37
Pde6c-201ENSMUST00000025956 SafbD3YXK2 937 aaKnown RBP17.34■□□□□ 0.37
Pde6c-201ENSMUST00000025956 Fam71e1A1L3C1 212 aa17.34■□□□□ 0.37
Pde6c-201ENSMUST00000025956 Kdm5bQ80Y84 1544 aa17.28■□□□□ 0.36
Pde6c-201ENSMUST00000025956 Eid3Q3V124 375 aa17.28■□□□□ 0.36
Pde6c-201ENSMUST00000025956 Mapk8ip2Q9ERE9 830 aa17.27■□□□□ 0.36
Pde6c-201ENSMUST00000025956 Ap3b1Q9Z1T1 1105 aa17.24■□□□□ 0.35
Pde6c-201ENSMUST00000025956 Arap1Q4LDD4 1452 aa17.18■□□□□ 0.34
Pde6c-201ENSMUST00000025956 Arhgap35Q91YM2 1499 aa17.17■□□□□ 0.34
Pde6c-201ENSMUST00000025956 Eea1Q8BL66 1411 aa17.16■□□□□ 0.34
Pde6c-201ENSMUST00000025956 DiexfQ8BTT6 772 aaKnown RBP17.15■□□□□ 0.34
Pde6c-201ENSMUST00000025956 Znf710Q3U288 666 aa17.14■□□□□ 0.33
Pde6c-201ENSMUST00000025956 Rpap1Q80TE0 1409 aa17.14■□□□□ 0.33
Pde6c-201ENSMUST00000025956 Ccdc18Q640L5 1455 aa17.12■□□□□ 0.33
Pde6c-201ENSMUST00000025956 Arhgef5E9Q7D5 1581 aa17.12■□□□□ 0.33
Pde6c-201ENSMUST00000025956 Bcl11aQ9QYE3 773 aa17.1■□□□□ 0.33
Pde6c-201ENSMUST00000025956 Baz1bQ9Z277 1479 aa17.09■□□□□ 0.33
Pde6c-201ENSMUST00000025956 Anp32aO35381 247 aa17.07■□□□□ 0.32
Pde6c-201ENSMUST00000025956 PtprkP35822 1457 aa17.06■□□□□ 0.32
Pde6c-201ENSMUST00000025956 TchhA0A0B4J1F9 1599 aa17.06■□□□□ 0.32
Pde6c-201ENSMUST00000025956 Setd5Q5XJV7 1441 aa17.06■□□□□ 0.32
Pde6c-201ENSMUST00000025956 NrkQ9R0G8 1455 aa17.06■□□□□ 0.32
Pde6c-201ENSMUST00000025956 Iqgap2Q3UQ44 1575 aa17.06■□□□□ 0.32
Pde6c-201ENSMUST00000025956 TnnQ80Z71 1560 aa17.06■□□□□ 0.32
Pde6c-201ENSMUST00000025956 Stra8P70278 393 aa17.05■□□□□ 0.32
Pde6c-201ENSMUST00000025956 NclP09405 707 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms