RNA–Protein interactions for RNA: ENSMUST00000022610.14

Scara5-201, Transcript of Scavenger receptor class A member 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scara5, Length 3,794 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5-201ENSMUST00000022610 Rhox8Q6VSS7 320 aa23.44■■□□□ 1.34
Scara5-201ENSMUST00000022610 NischQ80TM9 1593 aa23.31■■□□□ 1.32
Scara5-201ENSMUST00000022610 Abcc9P70170 1546 aa22.39■■□□□ 1.17
Scara5-201ENSMUST00000022610 Rpgrip1Q9EPQ2 1331 aa22.12■■□□□ 1.13
Scara5-201ENSMUST00000022610 Ehmt2Q9Z148 1263 aaKnown RBP22.11■■□□□ 1.13
Scara5-201ENSMUST00000022610 Gm35339A0A140LHH9 1649 aa21.85■■□□□ 1.09
Scara5-201ENSMUST00000022610 Ccdc180J3QNE4 1664 aa21.83■■□□□ 1.08
Scara5-201ENSMUST00000022610 Rtl1Q7M732 1744 aa21.82■■□□□ 1.08
Scara5-201ENSMUST00000022610 Abcc8B2RUS7 1588 aa21.8■■□□□ 1.08
Scara5-201ENSMUST00000022610 Acin1Q9JIX8 1338 aaKnown RBP21.61■■□□□ 1.05
Scara5-201ENSMUST00000022610 Ccdc136Q3TVA9 1136 aa21.56■■□□□ 1.04
Scara5-201ENSMUST00000022610 Pcgf6Q99NA9 353 aa21.16■□□□□ 0.98
Scara5-201ENSMUST00000022610 HrcG5E8J6 738 aa21.11■□□□□ 0.97
Scara5-201ENSMUST00000022610 Trim41Q5NCC3 630 aa21.1■□□□□ 0.97
Scara5-201ENSMUST00000022610 Zcchc6Q5BLK4 1491 aaKnown RBP21.01■□□□□ 0.95
Scara5-201ENSMUST00000022610 Supt5hO55201 1082 aaKnown RBP20.77■□□□□ 0.92
Scara5-201ENSMUST00000022610 Zeb1Q64318 1117 aa20.77■□□□□ 0.92
Scara5-201ENSMUST00000022610 Dcaf1Q80TR8 1506 aa20.76■□□□□ 0.91
Scara5-201ENSMUST00000022610 Gab3Q8BSM5 595 aa20.75■□□□□ 0.91
Scara5-201ENSMUST00000022610 Cngb1E1AZ71 1325 aa20.64■□□□□ 0.9
Scara5-201ENSMUST00000022610 Rb1cc1Q9ESK9 1588 aa20.48■□□□□ 0.87
Scara5-201ENSMUST00000022610 Neurod1Q60867 357 aa20.34■□□□□ 0.85
Scara5-201ENSMUST00000022610 Wdr66E9Q743 1299 aa20.27■□□□□ 0.84
Scara5-201ENSMUST00000022610 NefmP08553 848 aa20.24■□□□□ 0.83
Scara5-201ENSMUST00000022610 Cep164Q5DU05 1446 aa20.23■□□□□ 0.83
Scara5-201ENSMUST00000022610 Las1lA2BE28 776 aaKnown RBP20.22■□□□□ 0.83
Scara5-201ENSMUST00000022610 Mier1Q5UAK0 511 aa20.19■□□□□ 0.82
Scara5-201ENSMUST00000022610 Chic1Q8CBW7 227 aa20.19■□□□□ 0.82
Scara5-201ENSMUST00000022610 Esf1Q3V1V3 845 aaKnown RBP20.16■□□□□ 0.82
Scara5-201ENSMUST00000022610 Baz1aO88379 1555 aa20.12■□□□□ 0.81
Scara5-201ENSMUST00000022610 UbtfP25976 765 aaKnown RBP20.1■□□□□ 0.81
Scara5-201ENSMUST00000022610 Sall2Q9QX96 1004 aa20.07■□□□□ 0.8
Scara5-201ENSMUST00000022610 Ppargc1bQ8VHJ7 1014 aa20.03■□□□□ 0.8
Scara5-201ENSMUST00000022610 ScribQ80U72 1612 aa19.96■□□□□ 0.79
Scara5-201ENSMUST00000022610 Kdm5dQ62240 1548 aa19.95■□□□□ 0.78
Scara5-201ENSMUST00000022610 Myt1lP97500 1187 aa19.93■□□□□ 0.78
Scara5-201ENSMUST00000022610 Rsf1E9PWW9 1441 aaKnown RBP19.88■□□□□ 0.77
Scara5-201ENSMUST00000022610 Csrnp3P59055 597 aa19.79■□□□□ 0.76
Scara5-201ENSMUST00000022610 Cdk11bP24788 784 aaKnown RBP19.76■□□□□ 0.75
Scara5-201ENSMUST00000022610 NacadQ5SWP3 1504 aa19.74■□□□□ 0.75
Scara5-201ENSMUST00000022610 Nop58Q6DFW4 536 aaKnown RBP19.73■□□□□ 0.75
Scara5-201ENSMUST00000022610 Npm2Q80W85 207 aa19.68■□□□□ 0.74
Scara5-201ENSMUST00000022610 Anks4bQ8K3X6 423 aa19.67■□□□□ 0.74
Scara5-201ENSMUST00000022610 Aebp2Q9Z248 504 aaKnown RBP19.67■□□□□ 0.74
Scara5-201ENSMUST00000022610 Ccdc88bQ4QRL3 1481 aa19.67■□□□□ 0.74
Scara5-201ENSMUST00000022610 1700123L14RikQ3V2K7 440 aa19.65■□□□□ 0.74
Scara5-201ENSMUST00000022610 Brd4Q9ESU6 1400 aaKnown RBP19.63■□□□□ 0.73
Scara5-201ENSMUST00000022610 Gm38655A0A286YDK6 273 aa19.59■□□□□ 0.73
Scara5-201ENSMUST00000022610 Smarca2Q6DIC0 1577 aa19.58■□□□□ 0.73
Scara5-201ENSMUST00000022610 CenpbP27790 599 aa19.54■□□□□ 0.72
Scara5-201ENSMUST00000022610 ClspnQ80YR7 1315 aa19.53■□□□□ 0.72
Scara5-201ENSMUST00000022610 Golga3P55937 1487 aa19.52■□□□□ 0.72
Scara5-201ENSMUST00000022610 TonslQ6NZL6 1363 aa19.5■□□□□ 0.71
Scara5-201ENSMUST00000022610 Plekhg3Q4VAC9 1341 aa19.46■□□□□ 0.71
Scara5-201ENSMUST00000022610 Cecr2E9Q2Z1 1453 aa19.37■□□□□ 0.69
Scara5-201ENSMUST00000022610 Crybg2B7ZCC2 1516 aa19.34■□□□□ 0.69
Scara5-201ENSMUST00000022610 Ap3b1Q9Z1T1 1105 aa19.32■□□□□ 0.68
Scara5-201ENSMUST00000022610 Eid3Q3V124 375 aa19.29■□□□□ 0.68
Scara5-201ENSMUST00000022610 Aplp2Q06335 707 aa19.27■□□□□ 0.68
Scara5-201ENSMUST00000022610 Sycp2Q9CUU3 1500 aa19.22■□□□□ 0.67
Scara5-201ENSMUST00000022610 Mapk8ip2Q9ERE9 830 aa19.22■□□□□ 0.67
Scara5-201ENSMUST00000022610 Clip1Q922J3 1391 aa19.19■□□□□ 0.66
Scara5-201ENSMUST00000022610 Synj1Q8CHC4 1574 aa19.19■□□□□ 0.66
Scara5-201ENSMUST00000022610 Il27Q8K3I6 234 aa19.18■□□□□ 0.66
Scara5-201ENSMUST00000022610 CftrP26361 1476 aa19.06■□□□□ 0.64
Scara5-201ENSMUST00000022610 Myt1Q8CFC2 1127 aa19.06■□□□□ 0.64
Scara5-201ENSMUST00000022610 Fam50aQ9WV03 339 aaKnown RBP19.04■□□□□ 0.64
Scara5-201ENSMUST00000022610 Slc24a1Q91WD8 1130 aa19.02■□□□□ 0.64
Scara5-201ENSMUST00000022610 Cep162Q6ZQ06 1403 aa19.01■□□□□ 0.63
Scara5-201ENSMUST00000022610 NclP09405 707 aaKnown RBP19.01■□□□□ 0.63
Scara5-201ENSMUST00000022610 Ube2uB1AUC4 352 aa18.99■□□□□ 0.63
Scara5-201ENSMUST00000022610 Tnnt3Q9QZ47 272 aa18.98■□□□□ 0.63
Scara5-201ENSMUST00000022610 SafbD3YXK2 937 aaKnown RBP18.97■□□□□ 0.63
Scara5-201ENSMUST00000022610 Hnrnpul2Q00PI9 745 aaKnown RBP18.95■□□□□ 0.62
Scara5-201ENSMUST00000022610 Rapgef2Q8CHG7 1496 aa18.94■□□□□ 0.62
Scara5-201ENSMUST00000022610 Fam71e1A1L3C1 212 aa18.87■□□□□ 0.61
Scara5-201ENSMUST00000022610 Lmod2Q3UHZ5 550 aa18.87■□□□□ 0.61
Scara5-201ENSMUST00000022610 Stra8P70278 393 aa18.84■□□□□ 0.61
Scara5-201ENSMUST00000022610 Fmn1Q05860 1466 aa18.83■□□□□ 0.6
Scara5-201ENSMUST00000022610 Cc2d2aQ8CFW7 1633 aa18.82■□□□□ 0.6
Scara5-201ENSMUST00000022610 Setd5Q5XJV7 1441 aa18.73■□□□□ 0.59
Scara5-201ENSMUST00000022610 Top2bQ64511 1612 aa18.73■□□□□ 0.59
Scara5-201ENSMUST00000022610 Cttnbp2B9EJA2 1648 aa18.71■□□□□ 0.59
Scara5-201ENSMUST00000022610 Eif5bQ05D44 1216 aaKnown RBP18.69■□□□□ 0.58
Scara5-201ENSMUST00000022610 Eea1Q8BL66 1411 aa18.67■□□□□ 0.58
Scara5-201ENSMUST00000022610 Anp32aO35381 247 aa18.66■□□□□ 0.58
Scara5-201ENSMUST00000022610 BlmO88700 1416 aa18.66■□□□□ 0.58
Scara5-201ENSMUST00000022610 Top2aQ01320 1528 aaKnown RBP18.64■□□□□ 0.57
Scara5-201ENSMUST00000022610 DiexfQ8BTT6 772 aaKnown RBP18.63■□□□□ 0.57
Scara5-201ENSMUST00000022610 BicraF8VPZ9 1578 aa18.61■□□□□ 0.57
Scara5-201ENSMUST00000022610 Ncapd3Q6ZQK0 1506 aa18.61■□□□□ 0.57
Scara5-201ENSMUST00000022610 Pelp1Q9DBD5 1123 aaKnown RBP18.59■□□□□ 0.57
Scara5-201ENSMUST00000022610 Calr4Q3TQS0 420 aa18.57■□□□□ 0.56
Scara5-201ENSMUST00000022610 Smarca4Q3TKT4 1613 aaKnown RBP18.55■□□□□ 0.56
Scara5-201ENSMUST00000022610 Hspa5P20029 655 aaKnown RBP18.53■□□□□ 0.56
Scara5-201ENSMUST00000022610 Ttbk1Q6PCN3 1308 aa18.47■□□□□ 0.55
Scara5-201ENSMUST00000022610 Baz1bQ9Z277 1479 aa18.45■□□□□ 0.54
Scara5-201ENSMUST00000022610 Arap1Q4LDD4 1452 aa18.44■□□□□ 0.54
Scara5-201ENSMUST00000022610 Kif15Q6P9L6 1387 aa18.43■□□□□ 0.54
Scara5-201ENSMUST00000022610 Chic2Q9D9G3 165 aa18.43■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms