RNA–Protein interactions for RNA: ENSMUST00000022536.2

Ska3-201, Transcript of Spindle and kinetochore-associated protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ska3, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3-201ENSMUST00000022536 Gm35339A0A140LHH9 1649 aa21.52■■□□□ 1.03
Ska3-201ENSMUST00000022536 Rpgrip1Q9EPQ2 1331 aa21.4■■□□□ 1.02
Ska3-201ENSMUST00000022536 NischQ80TM9 1593 aa21.22■□□□□ 0.99
Ska3-201ENSMUST00000022536 Abcc9P70170 1546 aa20.59■□□□□ 0.89
Ska3-201ENSMUST00000022536 Abcc8B2RUS7 1588 aa20.47■□□□□ 0.87
Ska3-201ENSMUST00000022536 Pcgf6Q99NA9 353 aa20.44■□□□□ 0.86
Ska3-201ENSMUST00000022536 Acin1Q9JIX8 1338 aaKnown RBP20.22■□□□□ 0.83
Ska3-201ENSMUST00000022536 Myt1Q8CFC2 1127 aa20.06■□□□□ 0.8
Ska3-201ENSMUST00000022536 Las1lA2BE28 776 aaKnown RBP19.93■□□□□ 0.78
Ska3-201ENSMUST00000022536 CenpbP27790 599 aa19.76■□□□□ 0.75
Ska3-201ENSMUST00000022536 DiexfQ8BTT6 772 aaKnown RBP19.75■□□□□ 0.75
Ska3-201ENSMUST00000022536 Neurod1Q60867 357 aa19.61■□□□□ 0.73
Ska3-201ENSMUST00000022536 ScribQ80U72 1612 aa19.59■□□□□ 0.73
Ska3-201ENSMUST00000022536 Rtl1Q7M732 1744 aa19.57■□□□□ 0.72
Ska3-201ENSMUST00000022536 Ccdc180J3QNE4 1664 aa19.52■□□□□ 0.72
Ska3-201ENSMUST00000022536 Trim41Q5NCC3 630 aa19.44■□□□□ 0.7
Ska3-201ENSMUST00000022536 1700123L14RikQ3V2K7 440 aa19.41■□□□□ 0.7
Ska3-201ENSMUST00000022536 Supt5hO55201 1082 aaKnown RBP19.35■□□□□ 0.69
Ska3-201ENSMUST00000022536 Bcl11aQ9QYE3 773 aa19.28■□□□□ 0.68
Ska3-201ENSMUST00000022536 Dcaf1Q80TR8 1506 aa19.07■□□□□ 0.64
Ska3-201ENSMUST00000022536 NacadQ5SWP3 1504 aa19.06■□□□□ 0.64
Ska3-201ENSMUST00000022536 Anks4bQ8K3X6 423 aa19.05■□□□□ 0.64
Ska3-201ENSMUST00000022536 Ehmt2Q9Z148 1263 aaKnown RBP19.01■□□□□ 0.63
Ska3-201ENSMUST00000022536 Aplp2Q06335 707 aa19■□□□□ 0.63
Ska3-201ENSMUST00000022536 Kdm5dQ62240 1548 aa19■□□□□ 0.63
Ska3-201ENSMUST00000022536 Csrnp3P59055 597 aa18.98■□□□□ 0.63
Ska3-201ENSMUST00000022536 Amer1Q7TS75 1132 aa18.86■□□□□ 0.61
Ska3-201ENSMUST00000022536 PrkcshO08795 521 aa18.73■□□□□ 0.59
Ska3-201ENSMUST00000022536 Cngb1E1AZ71 1325 aa18.68■□□□□ 0.58
Ska3-201ENSMUST00000022536 Sycp2Q9CUU3 1500 aa18.66■□□□□ 0.58
Ska3-201ENSMUST00000022536 Rhox8Q6VSS7 320 aa18.56■□□□□ 0.56
Ska3-201ENSMUST00000022536 Rb1cc1Q9ESK9 1588 aa18.52■□□□□ 0.55
Ska3-201ENSMUST00000022536 HrcG5E8J6 738 aa18.47■□□□□ 0.55
Ska3-201ENSMUST00000022536 Sall2Q9QX96 1004 aa18.4■□□□□ 0.54
Ska3-201ENSMUST00000022536 Zcchc6Q5BLK4 1491 aaKnown RBP18.38■□□□□ 0.53
Ska3-201ENSMUST00000022536 Zeb1Q64318 1117 aa18.35■□□□□ 0.53
Ska3-201ENSMUST00000022536 BicraF8VPZ9 1578 aa18.32■□□□□ 0.52
Ska3-201ENSMUST00000022536 Baz1aO88379 1555 aa18.31■□□□□ 0.52
Ska3-201ENSMUST00000022536 Crybg2B7ZCC2 1516 aa18.29■□□□□ 0.52
Ska3-201ENSMUST00000022536 Cdk11bP24788 784 aaKnown RBP18.26■□□□□ 0.51
Ska3-201ENSMUST00000022536 NefmP08553 848 aa18.25■□□□□ 0.51
Ska3-201ENSMUST00000022536 Ifnlr1Q8CGK5 535 aa18.24■□□□□ 0.51
Ska3-201ENSMUST00000022536 Fam71e1A1L3C1 212 aa18.24■□□□□ 0.51
Ska3-201ENSMUST00000022536 Gm38655A0A286YDK6 273 aa18.18■□□□□ 0.5
Ska3-201ENSMUST00000022536 Nop58Q6DFW4 536 aaKnown RBP18.1■□□□□ 0.49
Ska3-201ENSMUST00000022536 Rtl5Q5DTT4 599 aa18.04■□□□□ 0.48
Ska3-201ENSMUST00000022536 Fgd1P52734 960 aa17.93■□□□□ 0.46
Ska3-201ENSMUST00000022536 Hdac5Q9Z2V6 1113 aa17.93■□□□□ 0.46
Ska3-201ENSMUST00000022536 Pknox2Q8BG99 474 aa17.89■□□□□ 0.45
Ska3-201ENSMUST00000022536 NrdcQ8BHG1 1161 aa17.87■□□□□ 0.45
Ska3-201ENSMUST00000022536 Pds5bQ4VA53 1446 aaKnown RBP17.85■□□□□ 0.45
Ska3-201ENSMUST00000022536 ClspnQ80YR7 1315 aa17.79■□□□□ 0.44
Ska3-201ENSMUST00000022536 Smarca2Q6DIC0 1577 aa17.78■□□□□ 0.44
Ska3-201ENSMUST00000022536 Tnnt3Q9QZ47 272 aa17.78■□□□□ 0.44
Ska3-201ENSMUST00000022536 Pelp1Q9DBD5 1123 aaKnown RBP17.76■□□□□ 0.43
Ska3-201ENSMUST00000022536 Mapk8ip2Q9ERE9 830 aa17.74■□□□□ 0.43
Ska3-201ENSMUST00000022536 Wdr66E9Q743 1299 aa17.74■□□□□ 0.43
Ska3-201ENSMUST00000022536 Anp32aO35381 247 aa17.71■□□□□ 0.43
Ska3-201ENSMUST00000022536 Atad2bE9Q166 1460 aaKnown RBP17.7■□□□□ 0.42
Ska3-201ENSMUST00000022536 Mier1Q5UAK0 511 aa17.69■□□□□ 0.42
Ska3-201ENSMUST00000022536 SafbD3YXK2 937 aaKnown RBP17.65■□□□□ 0.42
Ska3-201ENSMUST00000022536 Aebp2Q9Z248 504 aaKnown RBP17.65■□□□□ 0.42
Ska3-201ENSMUST00000022536 Smarca4Q3TKT4 1613 aaKnown RBP17.64■□□□□ 0.41
Ska3-201ENSMUST00000022536 Thoc2B1AZI6 1594 aaKnown RBP17.6■□□□□ 0.41
Ska3-201ENSMUST00000022536 Hnrnpul2Q00PI9 745 aaKnown RBP17.59■□□□□ 0.41
Ska3-201ENSMUST00000022536 Gtf3c3Q3TMP1 882 aa17.58■□□□□ 0.4
Ska3-201ENSMUST00000022536 Cecr2E9Q2Z1 1453 aa17.53■□□□□ 0.4
Ska3-201ENSMUST00000022536 CatipB9EKE5 520 aa17.51■□□□□ 0.39
Ska3-201ENSMUST00000022536 Ccdc9Q8VC31 543 aaKnown RBP17.51■□□□□ 0.39
Ska3-201ENSMUST00000022536 Iqgap2Q3UQ44 1575 aa17.49■□□□□ 0.39
Ska3-201ENSMUST00000022536 Ercc6F8VPZ5 1481 aa17.46■□□□□ 0.39
Ska3-201ENSMUST00000022536 Upf2A2AT37 1269 aaKnown RBP17.45■□□□□ 0.38
Ska3-201ENSMUST00000022536 Plcd4Q8K3R3 807 aa17.45■□□□□ 0.38
Ska3-201ENSMUST00000022536 Cep164Q5DU05 1446 aa17.4■□□□□ 0.38
Ska3-201ENSMUST00000022536 Irx3P81067 507 aa17.38■□□□□ 0.37
Ska3-201ENSMUST00000022536 Dnajc5bQ9CQ94 199 aa17.35■□□□□ 0.37
Ska3-201ENSMUST00000022536 Wdr62Q3U3T8 1523 aa17.32■□□□□ 0.36
Ska3-201ENSMUST00000022536 Brd4Q9ESU6 1400 aaKnown RBP17.31■□□□□ 0.36
Ska3-201ENSMUST00000022536 Ipo4Q8VI75 1082 aa17.31■□□□□ 0.36
Ska3-201ENSMUST00000022536 Nolc1E9Q5C9 702 aaKnown RBP17.3■□□□□ 0.36
Ska3-201ENSMUST00000022536 Il27Q8K3I6 234 aa17.3■□□□□ 0.36
Ska3-201ENSMUST00000022536 Cttnbp2B9EJA2 1648 aa17.28■□□□□ 0.36
Ska3-201ENSMUST00000022536 Cc2d2aQ8CFW7 1633 aa17.28■□□□□ 0.36
Ska3-201ENSMUST00000022536 Ccdc27Q3V036 639 aa17.28■□□□□ 0.36
Ska3-201ENSMUST00000022536 Ppargc1bQ8VHJ7 1014 aa17.27■□□□□ 0.36
Ska3-201ENSMUST00000022536 Fam135aQ6NS59 1506 aa17.26■□□□□ 0.35
Ska3-201ENSMUST00000022536 Frmpd1A2AKB4 1549 aa17.26■□□□□ 0.35
Ska3-201ENSMUST00000022536 Supt16hQ920B9 1047 aa17.26■□□□□ 0.35
Ska3-201ENSMUST00000022536 Ttbk1Q6PCN3 1308 aa17.25■□□□□ 0.35
Ska3-201ENSMUST00000022536 CftrP26361 1476 aa17.25■□□□□ 0.35
Ska3-201ENSMUST00000022536 Baz1bQ9Z277 1479 aa17.24■□□□□ 0.35
Ska3-201ENSMUST00000022536 Synj1Q8CHC4 1574 aa17.2■□□□□ 0.34
Ska3-201ENSMUST00000022536 BccipQ9CWI3 316 aa17.18■□□□□ 0.34
Ska3-201ENSMUST00000022536 Gtf3c5Q8R2T8 520 aa17.17■□□□□ 0.34
Ska3-201ENSMUST00000022536 Phldb1Q6PDH0 1371 aaKnown RBP17.16■□□□□ 0.34
Ska3-201ENSMUST00000022536 Ccdc136Q3TVA9 1136 aa17.15■□□□□ 0.34
Ska3-201ENSMUST00000022536 TonslQ6NZL6 1363 aa17.08■□□□□ 0.32
Ska3-201ENSMUST00000022536 Hsp90aa1P07901 733 aaKnown RBP17.07■□□□□ 0.32
Ska3-201ENSMUST00000022536 Calr4Q3TQS0 420 aa17.07■□□□□ 0.32
Ska3-201ENSMUST00000022536 Znf710Q3U288 666 aa17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms