RNA–Protein interactions for RNA: ENSMUST00000021920.7

Sptlc1-201, Transcript of Serine palmitoyltransferase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptlc1, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1-201ENSMUST00000021920 NischQ80TM9 1593 aa26.63■■□□□ 1.85
Sptlc1-201ENSMUST00000021920 Abcc9P70170 1546 aa25.88■■□□□ 1.73
Sptlc1-201ENSMUST00000021920 Gm35339A0A140LHH9 1649 aa25.83■■□□□ 1.73
Sptlc1-201ENSMUST00000021920 Rtl1Q7M732 1744 aa25.49■■□□□ 1.67
Sptlc1-201ENSMUST00000021920 Rhox8Q6VSS7 320 aa25.36■■□□□ 1.65
Sptlc1-201ENSMUST00000021920 Ccdc180J3QNE4 1664 aa25.18■■□□□ 1.62
Sptlc1-201ENSMUST00000021920 Abcc8B2RUS7 1588 aa25.11■■□□□ 1.61
Sptlc1-201ENSMUST00000021920 Rpgrip1Q9EPQ2 1331 aa25■■□□□ 1.59
Sptlc1-201ENSMUST00000021920 Zcchc6Q5BLK4 1491 aaKnown RBP24.47■■□□□ 1.51
Sptlc1-201ENSMUST00000021920 Acin1Q9JIX8 1338 aaKnown RBP24.41■■□□□ 1.5
Sptlc1-201ENSMUST00000021920 Ehmt2Q9Z148 1263 aaKnown RBP24.04■■□□□ 1.44
Sptlc1-201ENSMUST00000021920 Dcaf1Q80TR8 1506 aa23.92■■□□□ 1.42
Sptlc1-201ENSMUST00000021920 HrcG5E8J6 738 aa23.87■■□□□ 1.41
Sptlc1-201ENSMUST00000021920 Pcgf6Q99NA9 353 aa23.82■■□□□ 1.4
Sptlc1-201ENSMUST00000021920 Ccdc136Q3TVA9 1136 aa23.48■■□□□ 1.35
Sptlc1-201ENSMUST00000021920 Rb1cc1Q9ESK9 1588 aa23.4■■□□□ 1.34
Sptlc1-201ENSMUST00000021920 Trim41Q5NCC3 630 aa23.29■■□□□ 1.32
Sptlc1-201ENSMUST00000021920 Supt5hO55201 1082 aaKnown RBP23.26■■□□□ 1.31
Sptlc1-201ENSMUST00000021920 ScribQ80U72 1612 aa23.14■■□□□ 1.29
Sptlc1-201ENSMUST00000021920 Baz1aO88379 1555 aa23.11■■□□□ 1.29
Sptlc1-201ENSMUST00000021920 Cep164Q5DU05 1446 aa23.01■■□□□ 1.27
Sptlc1-201ENSMUST00000021920 Neurod1Q60867 357 aa22.95■■□□□ 1.26
Sptlc1-201ENSMUST00000021920 Kdm5dQ62240 1548 aa22.83■■□□□ 1.24
Sptlc1-201ENSMUST00000021920 Zeb1Q64318 1117 aa22.7■■□□□ 1.22
Sptlc1-201ENSMUST00000021920 Smarca2Q6DIC0 1577 aa22.66■■□□□ 1.22
Sptlc1-201ENSMUST00000021920 NefmP08553 848 aa22.57■■□□□ 1.2
Sptlc1-201ENSMUST00000021920 Cngb1E1AZ71 1325 aa22.54■■□□□ 1.2
Sptlc1-201ENSMUST00000021920 Rsf1E9PWW9 1441 aaKnown RBP22.52■■□□□ 1.2
Sptlc1-201ENSMUST00000021920 Las1lA2BE28 776 aaKnown RBP22.51■■□□□ 1.19
Sptlc1-201ENSMUST00000021920 Chic1Q8CBW7 227 aa22.51■■□□□ 1.19
Sptlc1-201ENSMUST00000021920 Mier1Q5UAK0 511 aa22.5■■□□□ 1.19
Sptlc1-201ENSMUST00000021920 Sall2Q9QX96 1004 aa22.49■■□□□ 1.19
Sptlc1-201ENSMUST00000021920 NacadQ5SWP3 1504 aa22.49■■□□□ 1.19
Sptlc1-201ENSMUST00000021920 Gab3Q8BSM5 595 aa22.48■■□□□ 1.19
Sptlc1-201ENSMUST00000021920 Crybg2B7ZCC2 1516 aa22.46■■□□□ 1.19
Sptlc1-201ENSMUST00000021920 Anks4bQ8K3X6 423 aa22.29■■□□□ 1.16
Sptlc1-201ENSMUST00000021920 Ccdc88bQ4QRL3 1481 aa22.29■■□□□ 1.16
Sptlc1-201ENSMUST00000021920 1700123L14RikQ3V2K7 440 aa22.27■■□□□ 1.16
Sptlc1-201ENSMUST00000021920 Csrnp3P59055 597 aa22.19■■□□□ 1.14
Sptlc1-201ENSMUST00000021920 Golga3P55937 1487 aa22.13■■□□□ 1.13
Sptlc1-201ENSMUST00000021920 Brd4Q9ESU6 1400 aaKnown RBP22.12■■□□□ 1.13
Sptlc1-201ENSMUST00000021920 Aebp2Q9Z248 504 aaKnown RBP22.04■■□□□ 1.12
Sptlc1-201ENSMUST00000021920 Wdr66E9Q743 1299 aa22.01■■□□□ 1.11
Sptlc1-201ENSMUST00000021920 Sycp2Q9CUU3 1500 aa22■■□□□ 1.11
Sptlc1-201ENSMUST00000021920 Cecr2E9Q2Z1 1453 aa21.99■■□□□ 1.11
Sptlc1-201ENSMUST00000021920 Synj1Q8CHC4 1574 aa21.95■■□□□ 1.1
Sptlc1-201ENSMUST00000021920 Cdk11bP24788 784 aaKnown RBP21.92■■□□□ 1.1
Sptlc1-201ENSMUST00000021920 UbtfP25976 765 aaKnown RBP21.92■■□□□ 1.1
Sptlc1-201ENSMUST00000021920 ClspnQ80YR7 1315 aa21.89■■□□□ 1.09
Sptlc1-201ENSMUST00000021920 Nop58Q6DFW4 536 aaKnown RBP21.88■■□□□ 1.09
Sptlc1-201ENSMUST00000021920 Aplp2Q06335 707 aa21.86■■□□□ 1.09
Sptlc1-201ENSMUST00000021920 Myt1Q8CFC2 1127 aa21.83■■□□□ 1.08
Sptlc1-201ENSMUST00000021920 Top2bQ64511 1612 aa21.82■■□□□ 1.08
Sptlc1-201ENSMUST00000021920 Ppargc1bQ8VHJ7 1014 aa21.77■■□□□ 1.08
Sptlc1-201ENSMUST00000021920 CenpbP27790 599 aa21.75■■□□□ 1.07
Sptlc1-201ENSMUST00000021920 Esf1Q3V1V3 845 aaKnown RBP21.71■■□□□ 1.07
Sptlc1-201ENSMUST00000021920 Rapgef2Q8CHG7 1496 aa21.7■■□□□ 1.06
Sptlc1-201ENSMUST00000021920 CftrP26361 1476 aa21.7■■□□□ 1.06
Sptlc1-201ENSMUST00000021920 DiexfQ8BTT6 772 aaKnown RBP21.68■■□□□ 1.06
Sptlc1-201ENSMUST00000021920 Cc2d2aQ8CFW7 1633 aa21.65■■□□□ 1.06
Sptlc1-201ENSMUST00000021920 TonslQ6NZL6 1363 aa21.63■■□□□ 1.05
Sptlc1-201ENSMUST00000021920 Gm38655A0A286YDK6 273 aa21.6■■□□□ 1.05
Sptlc1-201ENSMUST00000021920 Cttnbp2B9EJA2 1648 aa21.54■■□□□ 1.04
Sptlc1-201ENSMUST00000021920 Cep162Q6ZQ06 1403 aa21.51■■□□□ 1.03
Sptlc1-201ENSMUST00000021920 BicraF8VPZ9 1578 aa21.49■■□□□ 1.03
Sptlc1-201ENSMUST00000021920 Myt1lP97500 1187 aa21.48■■□□□ 1.03
Sptlc1-201ENSMUST00000021920 Top2aQ01320 1528 aaKnown RBP21.47■■□□□ 1.03
Sptlc1-201ENSMUST00000021920 Fmn1Q05860 1466 aa21.41■■□□□ 1.02
Sptlc1-201ENSMUST00000021920 Ncapd3Q6ZQK0 1506 aa21.39■■□□□ 1.01
Sptlc1-201ENSMUST00000021920 Plekhg3Q4VAC9 1341 aa21.35■■□□□ 1.01
Sptlc1-201ENSMUST00000021920 Clip1Q922J3 1391 aa21.32■■□□□ 1
Sptlc1-201ENSMUST00000021920 Bcl11aQ9QYE3 773 aa21.31■■□□□ 1
Sptlc1-201ENSMUST00000021920 Eif4g1Q6NZJ6 1600 aaKnown RBP21.26■□□□□ 0.99
Sptlc1-201ENSMUST00000021920 Hnrnpul2Q00PI9 745 aaKnown RBP21.25■□□□□ 0.99
Sptlc1-201ENSMUST00000021920 Npm2Q80W85 207 aa21.23■□□□□ 0.99
Sptlc1-201ENSMUST00000021920 Smarca4Q3TKT4 1613 aaKnown RBP21.2■□□□□ 0.99
Sptlc1-201ENSMUST00000021920 SafbD3YXK2 937 aaKnown RBP21.2■□□□□ 0.98
Sptlc1-201ENSMUST00000021920 Fam71e1A1L3C1 212 aa21.18■□□□□ 0.98
Sptlc1-201ENSMUST00000021920 Tnnt3Q9QZ47 272 aa21.15■□□□□ 0.98
Sptlc1-201ENSMUST00000021920 Mapk8ip2Q9ERE9 830 aa21.13■□□□□ 0.97
Sptlc1-201ENSMUST00000021920 Kdm5bQ80Y84 1544 aa21.12■□□□□ 0.97
Sptlc1-201ENSMUST00000021920 Eid3Q3V124 375 aa21.11■□□□□ 0.97
Sptlc1-201ENSMUST00000021920 Ap3b1Q9Z1T1 1105 aa21.08■□□□□ 0.97
Sptlc1-201ENSMUST00000021920 Arap1Q4LDD4 1452 aa21.01■□□□□ 0.95
Sptlc1-201ENSMUST00000021920 Arhgap35Q91YM2 1499 aa20.98■□□□□ 0.95
Sptlc1-201ENSMUST00000021920 Rpap1Q80TE0 1409 aa20.94■□□□□ 0.94
Sptlc1-201ENSMUST00000021920 Eea1Q8BL66 1411 aa20.93■□□□□ 0.94
Sptlc1-201ENSMUST00000021920 Arhgef5E9Q7D5 1581 aa20.91■□□□□ 0.94
Sptlc1-201ENSMUST00000021920 Znf710Q3U288 666 aa20.91■□□□□ 0.94
Sptlc1-201ENSMUST00000021920 Ccdc18Q640L5 1455 aa20.89■□□□□ 0.94
Sptlc1-201ENSMUST00000021920 Baz1bQ9Z277 1479 aa20.87■□□□□ 0.93
Sptlc1-201ENSMUST00000021920 TchhA0A0B4J1F9 1599 aa20.87■□□□□ 0.93
Sptlc1-201ENSMUST00000021920 Iqgap2Q3UQ44 1575 aa20.86■□□□□ 0.93
Sptlc1-201ENSMUST00000021920 TnnQ80Z71 1560 aa20.86■□□□□ 0.93
Sptlc1-201ENSMUST00000021920 PtprkP35822 1457 aa20.85■□□□□ 0.93
Sptlc1-201ENSMUST00000021920 NrkQ9R0G8 1455 aa20.82■□□□□ 0.92
Sptlc1-201ENSMUST00000021920 PrkcshO08795 521 aa20.82■□□□□ 0.92
Sptlc1-201ENSMUST00000021920 Anp32aO35381 247 aa20.82■□□□□ 0.92
Sptlc1-201ENSMUST00000021920 Setd5Q5XJV7 1441 aa20.81■□□□□ 0.92
Sptlc1-201ENSMUST00000021920 Ube2uB1AUC4 352 aa20.79■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms