RNA–Protein interactions for RNA: ENSMUST00000017799.11

Cd40-201, Transcript of Tumor necrosis factor receptor superfamily member 5, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cd40, Length 2,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40-201ENSMUST00000017799 NischQ80TM9 1593 aa20.91■□□□□ 0.94
Cd40-201ENSMUST00000017799 Rtl1Q7M732 1744 aa20.62■□□□□ 0.89
Cd40-201ENSMUST00000017799 Gm35339A0A140LHH9 1649 aa20.48■□□□□ 0.87
Cd40-201ENSMUST00000017799 Rpgrip1Q9EPQ2 1331 aa20.45■□□□□ 0.86
Cd40-201ENSMUST00000017799 Abcc9P70170 1546 aa20.44■□□□□ 0.86
Cd40-201ENSMUST00000017799 Ccdc180J3QNE4 1664 aa20.27■□□□□ 0.84
Cd40-201ENSMUST00000017799 Abcc8B2RUS7 1588 aa19.73■□□□□ 0.75
Cd40-201ENSMUST00000017799 Rhox8Q6VSS7 320 aa19.67■□□□□ 0.74
Cd40-201ENSMUST00000017799 Acin1Q9JIX8 1338 aaKnown RBP19.65■□□□□ 0.74
Cd40-201ENSMUST00000017799 Zcchc6Q5BLK4 1491 aaKnown RBP19.52■□□□□ 0.72
Cd40-201ENSMUST00000017799 Dcaf1Q80TR8 1506 aa19.3■□□□□ 0.68
Cd40-201ENSMUST00000017799 Pcgf6Q99NA9 353 aa19.13■□□□□ 0.65
Cd40-201ENSMUST00000017799 HrcG5E8J6 738 aa19.11■□□□□ 0.65
Cd40-201ENSMUST00000017799 Trim41Q5NCC3 630 aa18.82■□□□□ 0.6
Cd40-201ENSMUST00000017799 Ehmt2Q9Z148 1263 aaKnown RBP18.67■□□□□ 0.58
Cd40-201ENSMUST00000017799 Supt5hO55201 1082 aaKnown RBP18.52■□□□□ 0.56
Cd40-201ENSMUST00000017799 Las1lA2BE28 776 aaKnown RBP18.42■□□□□ 0.54
Cd40-201ENSMUST00000017799 Neurod1Q60867 357 aa18.4■□□□□ 0.54
Cd40-201ENSMUST00000017799 Rb1cc1Q9ESK9 1588 aa18.37■□□□□ 0.53
Cd40-201ENSMUST00000017799 Cep164Q5DU05 1446 aa18.33■□□□□ 0.53
Cd40-201ENSMUST00000017799 Baz1aO88379 1555 aa18.25■□□□□ 0.51
Cd40-201ENSMUST00000017799 Ccdc136Q3TVA9 1136 aa18.14■□□□□ 0.49
Cd40-201ENSMUST00000017799 NefmP08553 848 aa18.14■□□□□ 0.49
Cd40-201ENSMUST00000017799 Myt1Q8CFC2 1127 aa18.11■□□□□ 0.49
Cd40-201ENSMUST00000017799 Anks4bQ8K3X6 423 aa18.07■□□□□ 0.48
Cd40-201ENSMUST00000017799 Cngb1E1AZ71 1325 aa18.04■□□□□ 0.48
Cd40-201ENSMUST00000017799 ScribQ80U72 1612 aa18.02■□□□□ 0.48
Cd40-201ENSMUST00000017799 1700123L14RikQ3V2K7 440 aa17.96■□□□□ 0.47
Cd40-201ENSMUST00000017799 Smarca2Q6DIC0 1577 aa17.91■□□□□ 0.46
Cd40-201ENSMUST00000017799 Crybg2B7ZCC2 1516 aa17.91■□□□□ 0.46
Cd40-201ENSMUST00000017799 Sall2Q9QX96 1004 aa17.88■□□□□ 0.45
Cd40-201ENSMUST00000017799 Zeb1Q64318 1117 aa17.86■□□□□ 0.45
Cd40-201ENSMUST00000017799 CenpbP27790 599 aa17.82■□□□□ 0.44
Cd40-201ENSMUST00000017799 Kdm5dQ62240 1548 aa17.82■□□□□ 0.44
Cd40-201ENSMUST00000017799 Aplp2Q06335 707 aa17.81■□□□□ 0.44
Cd40-201ENSMUST00000017799 Mier1Q5UAK0 511 aa17.79■□□□□ 0.44
Cd40-201ENSMUST00000017799 Csrnp3P59055 597 aa17.75■□□□□ 0.43
Cd40-201ENSMUST00000017799 Rsf1E9PWW9 1441 aaKnown RBP17.72■□□□□ 0.43
Cd40-201ENSMUST00000017799 NacadQ5SWP3 1504 aa17.64■□□□□ 0.41
Cd40-201ENSMUST00000017799 Cdk11bP24788 784 aaKnown RBP17.58■□□□□ 0.4
Cd40-201ENSMUST00000017799 Chic1Q8CBW7 227 aa17.55■□□□□ 0.4
Cd40-201ENSMUST00000017799 ClspnQ80YR7 1315 aa17.55■□□□□ 0.4
Cd40-201ENSMUST00000017799 Nop58Q6DFW4 536 aaKnown RBP17.49■□□□□ 0.39
Cd40-201ENSMUST00000017799 Golga3P55937 1487 aa17.48■□□□□ 0.39
Cd40-201ENSMUST00000017799 Ccdc88bQ4QRL3 1481 aa17.47■□□□□ 0.39
Cd40-201ENSMUST00000017799 Brd4Q9ESU6 1400 aaKnown RBP17.45■□□□□ 0.38
Cd40-201ENSMUST00000017799 Aebp2Q9Z248 504 aaKnown RBP17.41■□□□□ 0.38
Cd40-201ENSMUST00000017799 Gab3Q8BSM5 595 aa17.39■□□□□ 0.37
Cd40-201ENSMUST00000017799 Wdr66E9Q743 1299 aa17.35■□□□□ 0.37
Cd40-201ENSMUST00000017799 Top2bQ64511 1612 aa17.29■□□□□ 0.36
Cd40-201ENSMUST00000017799 DiexfQ8BTT6 772 aaKnown RBP17.23■□□□□ 0.35
Cd40-201ENSMUST00000017799 Rapgef2Q8CHG7 1496 aa17.23■□□□□ 0.35
Cd40-201ENSMUST00000017799 Sycp2Q9CUU3 1500 aa17.22■□□□□ 0.35
Cd40-201ENSMUST00000017799 Synj1Q8CHC4 1574 aa17.2■□□□□ 0.34
Cd40-201ENSMUST00000017799 TonslQ6NZL6 1363 aa17.18■□□□□ 0.34
Cd40-201ENSMUST00000017799 Tnnt3Q9QZ47 272 aa17.16■□□□□ 0.34
Cd40-201ENSMUST00000017799 Cecr2E9Q2Z1 1453 aa17.12■□□□□ 0.33
Cd40-201ENSMUST00000017799 UbtfP25976 765 aaKnown RBP17.11■□□□□ 0.33
Cd40-201ENSMUST00000017799 Bcl11aQ9QYE3 773 aa17.09■□□□□ 0.33
Cd40-201ENSMUST00000017799 Ncapd3Q6ZQK0 1506 aa17.04■□□□□ 0.32
Cd40-201ENSMUST00000017799 CftrP26361 1476 aa17.04■□□□□ 0.32
Cd40-201ENSMUST00000017799 Fam71e1A1L3C1 212 aa17.01■□□□□ 0.31
Cd40-201ENSMUST00000017799 Top2aQ01320 1528 aaKnown RBP17■□□□□ 0.31
Cd40-201ENSMUST00000017799 Gm38655A0A286YDK6 273 aa17■□□□□ 0.31
Cd40-201ENSMUST00000017799 Cttnbp2B9EJA2 1648 aa16.99■□□□□ 0.31
Cd40-201ENSMUST00000017799 Cep162Q6ZQ06 1403 aa16.99■□□□□ 0.31
Cd40-201ENSMUST00000017799 Cc2d2aQ8CFW7 1633 aa16.97■□□□□ 0.31
Cd40-201ENSMUST00000017799 Eif4g1Q6NZJ6 1600 aaKnown RBP16.93■□□□□ 0.3
Cd40-201ENSMUST00000017799 Fmn1Q05860 1466 aa16.93■□□□□ 0.3
Cd40-201ENSMUST00000017799 Hnrnpul2Q00PI9 745 aaKnown RBP16.92■□□□□ 0.3
Cd40-201ENSMUST00000017799 Rtl5Q5DTT4 599 aa16.9■□□□□ 0.3
Cd40-201ENSMUST00000017799 Kdm5bQ80Y84 1544 aa16.88■□□□□ 0.29
Cd40-201ENSMUST00000017799 Ppargc1bQ8VHJ7 1014 aa16.87■□□□□ 0.29
Cd40-201ENSMUST00000017799 Anp32aO35381 247 aa16.84■□□□□ 0.29
Cd40-201ENSMUST00000017799 SafbD3YXK2 937 aaKnown RBP16.8■□□□□ 0.28
Cd40-201ENSMUST00000017799 Stra8P70278 393 aa16.77■□□□□ 0.28
Cd40-201ENSMUST00000017799 Esf1Q3V1V3 845 aaKnown RBP16.77■□□□□ 0.28
Cd40-201ENSMUST00000017799 Clip1Q922J3 1391 aa16.77■□□□□ 0.27
Cd40-201ENSMUST00000017799 TchhA0A0B4J1F9 1599 aa16.76■□□□□ 0.27
Cd40-201ENSMUST00000017799 Znf710Q3U288 666 aa16.75■□□□□ 0.27
Cd40-201ENSMUST00000017799 Mapk8ip2Q9ERE9 830 aa16.74■□□□□ 0.27
Cd40-201ENSMUST00000017799 BicraF8VPZ9 1578 aa16.73■□□□□ 0.27
Cd40-201ENSMUST00000017799 Rpap1Q80TE0 1409 aa16.7■□□□□ 0.26
Cd40-201ENSMUST00000017799 Ccdc18Q640L5 1455 aa16.65■□□□□ 0.26
Cd40-201ENSMUST00000017799 Pelp1Q9DBD5 1123 aaKnown RBP16.63■□□□□ 0.25
Cd40-201ENSMUST00000017799 Smarca4Q3TKT4 1613 aaKnown RBP16.63■□□□□ 0.25
Cd40-201ENSMUST00000017799 UacaQ8CGB3 1411 aa16.6■□□□□ 0.25
Cd40-201ENSMUST00000017799 Plekhg3Q4VAC9 1341 aa16.6■□□□□ 0.25
Cd40-201ENSMUST00000017799 Myt1lP97500 1187 aa16.6■□□□□ 0.25
Cd40-201ENSMUST00000017799 Arhgef5E9Q7D5 1581 aa16.59■□□□□ 0.25
Cd40-201ENSMUST00000017799 Baz1bQ9Z277 1479 aa16.59■□□□□ 0.25
Cd40-201ENSMUST00000017799 Ap3b1Q9Z1T1 1105 aa16.57■□□□□ 0.24
Cd40-201ENSMUST00000017799 Arap1Q4LDD4 1452 aa16.56■□□□□ 0.24
Cd40-201ENSMUST00000017799 Eea1Q8BL66 1411 aa16.55■□□□□ 0.24
Cd40-201ENSMUST00000017799 Arhgap35Q91YM2 1499 aa16.54■□□□□ 0.24
Cd40-201ENSMUST00000017799 Calr4Q3TQS0 420 aa16.53■□□□□ 0.24
Cd40-201ENSMUST00000017799 TnnQ80Z71 1560 aa16.52■□□□□ 0.23
Cd40-201ENSMUST00000017799 Nolc1E9Q5C9 702 aaKnown RBP16.51■□□□□ 0.23
Cd40-201ENSMUST00000017799 Camsap2Q8C1B1 1461 aa16.51■□□□□ 0.23
Cd40-201ENSMUST00000017799 NrkQ9R0G8 1455 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms