RNA–Protein interactions for RNA: ENSMUST00000004494.15

Sin3b-201, Transcript of Paired amphipathic helix protein Sin3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sin3b, Length 4,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sin3b-201ENSMUST00000004494 Rpgrip1Q9EPQ2 1331 aa20.76■□□□□ 0.91
Sin3b-201ENSMUST00000004494 Rhox8Q6VSS7 320 aa19.91■□□□□ 0.78
Sin3b-201ENSMUST00000004494 Acin1Q9JIX8 1338 aaKnown RBP19.73■□□□□ 0.75
Sin3b-201ENSMUST00000004494 Pcgf6Q99NA9 353 aa19.55■□□□□ 0.72
Sin3b-201ENSMUST00000004494 Ehmt2Q9Z148 1263 aaKnown RBP19.48■□□□□ 0.71
Sin3b-201ENSMUST00000004494 Las1lA2BE28 776 aaKnown RBP19.39■□□□□ 0.69
Sin3b-201ENSMUST00000004494 Ccdc180J3QNE4 1664 aa19.22■□□□□ 0.67
Sin3b-201ENSMUST00000004494 Rtl1Q7M732 1744 aa19.16■□□□□ 0.66
Sin3b-201ENSMUST00000004494 NischQ80TM9 1593 aa19.13■□□□□ 0.65
Sin3b-201ENSMUST00000004494 Supt5hO55201 1082 aaKnown RBP18.91■□□□□ 0.62
Sin3b-201ENSMUST00000004494 Myt1Q8CFC2 1127 aa18.84■□□□□ 0.61
Sin3b-201ENSMUST00000004494 Neurod1Q60867 357 aa18.84■□□□□ 0.61
Sin3b-201ENSMUST00000004494 CenpbP27790 599 aa18.8■□□□□ 0.6
Sin3b-201ENSMUST00000004494 Zeb1Q64318 1117 aa18.65■□□□□ 0.58
Sin3b-201ENSMUST00000004494 HrcG5E8J6 738 aa18.52■□□□□ 0.56
Sin3b-201ENSMUST00000004494 Dcaf1Q80TR8 1506 aa18.52■□□□□ 0.56
Sin3b-201ENSMUST00000004494 Cngb1E1AZ71 1325 aa18.51■□□□□ 0.55
Sin3b-201ENSMUST00000004494 Trim41Q5NCC3 630 aa18.5■□□□□ 0.55
Sin3b-201ENSMUST00000004494 DiexfQ8BTT6 772 aaKnown RBP18.48■□□□□ 0.55
Sin3b-201ENSMUST00000004494 1700123L14RikQ3V2K7 440 aa18.42■□□□□ 0.54
Sin3b-201ENSMUST00000004494 Abcc9P70170 1546 aa18.37■□□□□ 0.53
Sin3b-201ENSMUST00000004494 Csrnp3P59055 597 aa18.32■□□□□ 0.52
Sin3b-201ENSMUST00000004494 Anks4bQ8K3X6 423 aa18.3■□□□□ 0.52
Sin3b-201ENSMUST00000004494 NefmP08553 848 aa18.29■□□□□ 0.52
Sin3b-201ENSMUST00000004494 Wdr66E9Q743 1299 aa18.21■□□□□ 0.51
Sin3b-201ENSMUST00000004494 Aplp2Q06335 707 aa18.16■□□□□ 0.5
Sin3b-201ENSMUST00000004494 Ccdc136Q3TVA9 1136 aa18.14■□□□□ 0.5
Sin3b-201ENSMUST00000004494 Cdk11bP24788 784 aaKnown RBP18.13■□□□□ 0.49
Sin3b-201ENSMUST00000004494 Sall2Q9QX96 1004 aa18.09■□□□□ 0.49
Sin3b-201ENSMUST00000004494 Nop58Q6DFW4 536 aaKnown RBP18■□□□□ 0.47
Sin3b-201ENSMUST00000004494 Zcchc6Q5BLK4 1491 aaKnown RBP17.98■□□□□ 0.47
Sin3b-201ENSMUST00000004494 Bcl11aQ9QYE3 773 aa17.96■□□□□ 0.46
Sin3b-201ENSMUST00000004494 Gm38655A0A286YDK6 273 aa17.88■□□□□ 0.45
Sin3b-201ENSMUST00000004494 Mier1Q5UAK0 511 aa17.8■□□□□ 0.44
Sin3b-201ENSMUST00000004494 Amer1Q7TS75 1132 aa17.79■□□□□ 0.44
Sin3b-201ENSMUST00000004494 Pelp1Q9DBD5 1123 aaKnown RBP17.73■□□□□ 0.43
Sin3b-201ENSMUST00000004494 Gab3Q8BSM5 595 aa17.71■□□□□ 0.43
Sin3b-201ENSMUST00000004494 Abcc8B2RUS7 1588 aa17.7■□□□□ 0.42
Sin3b-201ENSMUST00000004494 ClspnQ80YR7 1315 aa17.65■□□□□ 0.42
Sin3b-201ENSMUST00000004494 Ppargc1bQ8VHJ7 1014 aa17.65■□□□□ 0.42
Sin3b-201ENSMUST00000004494 Gm35339A0A140LHH9 1649 aa17.61■□□□□ 0.41
Sin3b-201ENSMUST00000004494 Tnnt3Q9QZ47 272 aa17.6■□□□□ 0.41
Sin3b-201ENSMUST00000004494 Fam71e1A1L3C1 212 aa17.58■□□□□ 0.4
Sin3b-201ENSMUST00000004494 Cep164Q5DU05 1446 aa17.49■□□□□ 0.39
Sin3b-201ENSMUST00000004494 Rtl5Q5DTT4 599 aa17.47■□□□□ 0.39
Sin3b-201ENSMUST00000004494 Aebp2Q9Z248 504 aaKnown RBP17.47■□□□□ 0.39
Sin3b-201ENSMUST00000004494 UbtfP25976 765 aaKnown RBP17.46■□□□□ 0.39
Sin3b-201ENSMUST00000004494 Mapk8ip2Q9ERE9 830 aa17.42■□□□□ 0.38
Sin3b-201ENSMUST00000004494 PrkcshO08795 521 aa17.39■□□□□ 0.37
Sin3b-201ENSMUST00000004494 Anp32aO35381 247 aa17.38■□□□□ 0.37
Sin3b-201ENSMUST00000004494 TonslQ6NZL6 1363 aa17.32■□□□□ 0.36
Sin3b-201ENSMUST00000004494 Ttbk1Q6PCN3 1308 aa17.28■□□□□ 0.36
Sin3b-201ENSMUST00000004494 Stra8P70278 393 aa17.26■□□□□ 0.35
Sin3b-201ENSMUST00000004494 SafbD3YXK2 937 aaKnown RBP17.25■□□□□ 0.35
Sin3b-201ENSMUST00000004494 Hnrnpul2Q00PI9 745 aaKnown RBP17.2■□□□□ 0.34
Sin3b-201ENSMUST00000004494 Ifnlr1Q8CGK5 535 aa17.15■□□□□ 0.34
Sin3b-201ENSMUST00000004494 Ap3b1Q9Z1T1 1105 aa17.08■□□□□ 0.32
Sin3b-201ENSMUST00000004494 Chic1Q8CBW7 227 aa17.03■□□□□ 0.32
Sin3b-201ENSMUST00000004494 Calr4Q3TQS0 420 aa16.94■□□□□ 0.3
Sin3b-201ENSMUST00000004494 Myt1lP97500 1187 aa16.93■□□□□ 0.3
Sin3b-201ENSMUST00000004494 Slc24a1Q91WD8 1130 aa16.88■□□□□ 0.29
Sin3b-201ENSMUST00000004494 Hdac5Q9Z2V6 1113 aa16.86■□□□□ 0.29
Sin3b-201ENSMUST00000004494 Rb1cc1Q9ESK9 1588 aa16.84■□□□□ 0.29
Sin3b-201ENSMUST00000004494 Esf1Q3V1V3 845 aaKnown RBP16.81■□□□□ 0.28
Sin3b-201ENSMUST00000004494 4933416C03RikQ3V063 378 aa16.81■□□□□ 0.28
Sin3b-201ENSMUST00000004494 Rsf1E9PWW9 1441 aaKnown RBP16.81■□□□□ 0.28
Sin3b-201ENSMUST00000004494 Ccdc9Q8VC31 543 aaKnown RBP16.81■□□□□ 0.28
Sin3b-201ENSMUST00000004494 Ppp4r2Q0VGB7 417 aa16.79■□□□□ 0.28
Sin3b-201ENSMUST00000004494 Supt16hQ920B9 1047 aa16.77■□□□□ 0.28
Sin3b-201ENSMUST00000004494 Nolc1E9Q5C9 702 aaKnown RBP16.77■□□□□ 0.28
Sin3b-201ENSMUST00000004494 Ccdc27Q3V036 639 aa16.74■□□□□ 0.27
Sin3b-201ENSMUST00000004494 Wdr43Q6ZQL4 677 aaKnown RBP16.74■□□□□ 0.27
Sin3b-201ENSMUST00000004494 Eif5bQ05D44 1216 aaKnown RBP16.73■□□□□ 0.27
Sin3b-201ENSMUST00000004494 NclP09405 707 aaKnown RBP16.72■□□□□ 0.27
Sin3b-201ENSMUST00000004494 Upf2A2AT37 1269 aaKnown RBP16.71■□□□□ 0.27
Sin3b-201ENSMUST00000004494 Eid3Q3V124 375 aa16.69■□□□□ 0.26
Sin3b-201ENSMUST00000004494 Irx3P81067 507 aa16.68■□□□□ 0.26
Sin3b-201ENSMUST00000004494 Npm2Q80W85 207 aa16.68■□□□□ 0.26
Sin3b-201ENSMUST00000004494 Gtf3c3Q3TMP1 882 aa16.67■□□□□ 0.26
Sin3b-201ENSMUST00000004494 Hsp90aa1P07901 733 aaKnown RBP16.64■□□□□ 0.25
Sin3b-201ENSMUST00000004494 Pknox2Q8BG99 474 aa16.64■□□□□ 0.25
Sin3b-201ENSMUST00000004494 Plekhg3Q4VAC9 1341 aa16.61■□□□□ 0.25
Sin3b-201ENSMUST00000004494 Baz1aO88379 1555 aa16.6■□□□□ 0.25
Sin3b-201ENSMUST00000004494 DaxxO35613 739 aa16.59■□□□□ 0.25
Sin3b-201ENSMUST00000004494 NrdcQ8BHG1 1161 aa16.58■□□□□ 0.24
Sin3b-201ENSMUST00000004494 Znf710Q3U288 666 aa16.57■□□□□ 0.24
Sin3b-201ENSMUST00000004494 Plcd4Q8K3R3 807 aa16.51■□□□□ 0.23
Sin3b-201ENSMUST00000004494 Ccdc88bQ4QRL3 1481 aa16.51■□□□□ 0.23
Sin3b-201ENSMUST00000004494 Fgd1P52734 960 aa16.5■□□□□ 0.23
Sin3b-201ENSMUST00000004494 Il27Q8K3I6 234 aa16.45■□□□□ 0.22
Sin3b-201ENSMUST00000004494 Clip1Q922J3 1391 aa16.42■□□□□ 0.22
Sin3b-201ENSMUST00000004494 Golga3P55937 1487 aa16.39■□□□□ 0.21
Sin3b-201ENSMUST00000004494 Brd4Q9ESU6 1400 aaKnown RBP16.39■□□□□ 0.21
Sin3b-201ENSMUST00000004494 Ube2uB1AUC4 352 aa16.36■□□□□ 0.21
Sin3b-201ENSMUST00000004494 Fam50aQ9WV03 339 aaKnown RBP16.34■□□□□ 0.21
Sin3b-201ENSMUST00000004494 Ipo9Q91YE6 1041 aa16.34■□□□□ 0.21
Sin3b-201ENSMUST00000004494 Pak3Q61036 559 aa16.33■□□□□ 0.2
Sin3b-201ENSMUST00000004494 P3h3Q8CG70 732 aa16.28■□□□□ 0.2
Sin3b-201ENSMUST00000004494 Ipo4Q8VI75 1082 aa16.27■□□□□ 0.2
Sin3b-201ENSMUST00000004494 Washc2Q6PGL7 1334 aa16.25■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 132.1 ms