RNA–Protein interactions for RNA: ENSMUST00000001809.14

Pabpc1-201, Transcript of Polyadenylate-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pabpc1, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc1-201ENSMUST00000001809 NischQ80TM9 1593 aa21.26■□□□□ 0.99
Pabpc1-201ENSMUST00000001809 Abcc9P70170 1546 aa20.56■□□□□ 0.88
Pabpc1-201ENSMUST00000001809 Gm35339A0A140LHH9 1649 aa20.48■□□□□ 0.87
Pabpc1-201ENSMUST00000001809 Rhox8Q6VSS7 320 aa20.45■□□□□ 0.86
Pabpc1-201ENSMUST00000001809 Abcc8B2RUS7 1588 aa20.03■□□□□ 0.8
Pabpc1-201ENSMUST00000001809 Rtl1Q7M732 1744 aa19.81■□□□□ 0.76
Pabpc1-201ENSMUST00000001809 Ccdc180J3QNE4 1664 aa19.6■□□□□ 0.73
Pabpc1-201ENSMUST00000001809 Rpgrip1Q9EPQ2 1331 aa19.16■□□□□ 0.66
Pabpc1-201ENSMUST00000001809 Zcchc6Q5BLK4 1491 aaKnown RBP19.05■□□□□ 0.64
Pabpc1-201ENSMUST00000001809 Ehmt2Q9Z148 1263 aaKnown RBP18.97■□□□□ 0.63
Pabpc1-201ENSMUST00000001809 Ccdc136Q3TVA9 1136 aa18.91■□□□□ 0.62
Pabpc1-201ENSMUST00000001809 Acin1Q9JIX8 1338 aaKnown RBP18.82■□□□□ 0.6
Pabpc1-201ENSMUST00000001809 HrcG5E8J6 738 aa18.73■□□□□ 0.59
Pabpc1-201ENSMUST00000001809 Rb1cc1Q9ESK9 1588 aa18.67■□□□□ 0.58
Pabpc1-201ENSMUST00000001809 Dcaf1Q80TR8 1506 aa18.6■□□□□ 0.57
Pabpc1-201ENSMUST00000001809 ScribQ80U72 1612 aa18.53■□□□□ 0.56
Pabpc1-201ENSMUST00000001809 Trim41Q5NCC3 630 aa18.51■□□□□ 0.55
Pabpc1-201ENSMUST00000001809 Baz1aO88379 1555 aa18.4■□□□□ 0.54
Pabpc1-201ENSMUST00000001809 Kdm5dQ62240 1548 aa18.32■□□□□ 0.52
Pabpc1-201ENSMUST00000001809 Pcgf6Q99NA9 353 aa18.26■□□□□ 0.51
Pabpc1-201ENSMUST00000001809 NacadQ5SWP3 1504 aa18.11■□□□□ 0.49
Pabpc1-201ENSMUST00000001809 Cep164Q5DU05 1446 aa18.08■□□□□ 0.48
Pabpc1-201ENSMUST00000001809 Cngb1E1AZ71 1325 aa18.08■□□□□ 0.48
Pabpc1-201ENSMUST00000001809 Gab3Q8BSM5 595 aa18.05■□□□□ 0.48
Pabpc1-201ENSMUST00000001809 Smarca2Q6DIC0 1577 aa17.96■□□□□ 0.47
Pabpc1-201ENSMUST00000001809 Supt5hO55201 1082 aaKnown RBP17.94■□□□□ 0.46
Pabpc1-201ENSMUST00000001809 Chic1Q8CBW7 227 aa17.9■□□□□ 0.46
Pabpc1-201ENSMUST00000001809 Crybg2B7ZCC2 1516 aa17.84■□□□□ 0.45
Pabpc1-201ENSMUST00000001809 Zeb1Q64318 1117 aa17.82■□□□□ 0.44
Pabpc1-201ENSMUST00000001809 Ube2uB1AUC4 352 aa17.81■□□□□ 0.44
Pabpc1-201ENSMUST00000001809 Rsf1E9PWW9 1441 aaKnown RBP17.8■□□□□ 0.44
Pabpc1-201ENSMUST00000001809 Brd4Q9ESU6 1400 aaKnown RBP17.7■□□□□ 0.42
Pabpc1-201ENSMUST00000001809 Esf1Q3V1V3 845 aaKnown RBP17.69■□□□□ 0.42
Pabpc1-201ENSMUST00000001809 Sycp2Q9CUU3 1500 aa17.69■□□□□ 0.42
Pabpc1-201ENSMUST00000001809 Ccdc88bQ4QRL3 1481 aa17.65■□□□□ 0.42
Pabpc1-201ENSMUST00000001809 Mier1Q5UAK0 511 aa17.64■□□□□ 0.41
Pabpc1-201ENSMUST00000001809 NefmP08553 848 aa17.62■□□□□ 0.41
Pabpc1-201ENSMUST00000001809 Cecr2E9Q2Z1 1453 aa17.61■□□□□ 0.41
Pabpc1-201ENSMUST00000001809 Golga3P55937 1487 aa17.59■□□□□ 0.41
Pabpc1-201ENSMUST00000001809 Neurod1Q60867 357 aa17.54■□□□□ 0.4
Pabpc1-201ENSMUST00000001809 Synj1Q8CHC4 1574 aa17.49■□□□□ 0.39
Pabpc1-201ENSMUST00000001809 UbtfP25976 765 aaKnown RBP17.45■□□□□ 0.38
Pabpc1-201ENSMUST00000001809 Sall2Q9QX96 1004 aa17.42■□□□□ 0.38
Pabpc1-201ENSMUST00000001809 Wdr66E9Q743 1299 aa17.35■□□□□ 0.37
Pabpc1-201ENSMUST00000001809 Myt1lP97500 1187 aa17.34■□□□□ 0.37
Pabpc1-201ENSMUST00000001809 CftrP26361 1476 aa17.33■□□□□ 0.36
Pabpc1-201ENSMUST00000001809 Las1lA2BE28 776 aaKnown RBP17.3■□□□□ 0.36
Pabpc1-201ENSMUST00000001809 BicraF8VPZ9 1578 aa17.25■□□□□ 0.35
Pabpc1-201ENSMUST00000001809 Top2bQ64511 1612 aa17.21■□□□□ 0.35
Pabpc1-201ENSMUST00000001809 Npm2Q80W85 207 aa17.2■□□□□ 0.34
Pabpc1-201ENSMUST00000001809 Cc2d2aQ8CFW7 1633 aa17.18■□□□□ 0.34
Pabpc1-201ENSMUST00000001809 Cttnbp2B9EJA2 1648 aa17.16■□□□□ 0.34
Pabpc1-201ENSMUST00000001809 Ppargc1bQ8VHJ7 1014 aa17.16■□□□□ 0.34
Pabpc1-201ENSMUST00000001809 Aebp2Q9Z248 504 aaKnown RBP17.15■□□□□ 0.34
Pabpc1-201ENSMUST00000001809 Rapgef2Q8CHG7 1496 aa17.1■□□□□ 0.33
Pabpc1-201ENSMUST00000001809 Anks4bQ8K3X6 423 aa17.04■□□□□ 0.32
Pabpc1-201ENSMUST00000001809 Plekhg3Q4VAC9 1341 aa17.04■□□□□ 0.32
Pabpc1-201ENSMUST00000001809 Fmn1Q05860 1466 aa17.04■□□□□ 0.32
Pabpc1-201ENSMUST00000001809 Cep162Q6ZQ06 1403 aa17.03■□□□□ 0.32
Pabpc1-201ENSMUST00000001809 Smarca4Q3TKT4 1613 aaKnown RBP17.02■□□□□ 0.32
Pabpc1-201ENSMUST00000001809 ClspnQ80YR7 1315 aa17.02■□□□□ 0.32
Pabpc1-201ENSMUST00000001809 Cdk11bP24788 784 aaKnown RBP17.02■□□□□ 0.31
Pabpc1-201ENSMUST00000001809 Nop58Q6DFW4 536 aaKnown RBP17.01■□□□□ 0.31
Pabpc1-201ENSMUST00000001809 TonslQ6NZL6 1363 aa17■□□□□ 0.31
Pabpc1-201ENSMUST00000001809 Csrnp3P59055 597 aa17■□□□□ 0.31
Pabpc1-201ENSMUST00000001809 Top2aQ01320 1528 aaKnown RBP16.97■□□□□ 0.31
Pabpc1-201ENSMUST00000001809 Clip1Q922J3 1391 aa16.96■□□□□ 0.31
Pabpc1-201ENSMUST00000001809 DiexfQ8BTT6 772 aaKnown RBP16.94■□□□□ 0.3
Pabpc1-201ENSMUST00000001809 1700123L14RikQ3V2K7 440 aa16.9■□□□□ 0.3
Pabpc1-201ENSMUST00000001809 Ap3b1Q9Z1T1 1105 aa16.86■□□□□ 0.29
Pabpc1-201ENSMUST00000001809 Il27Q8K3I6 234 aa16.82■□□□□ 0.28
Pabpc1-201ENSMUST00000001809 Iqgap2Q3UQ44 1575 aa16.79■□□□□ 0.28
Pabpc1-201ENSMUST00000001809 Eid3Q3V124 375 aa16.77■□□□□ 0.27
Pabpc1-201ENSMUST00000001809 Ncapd3Q6ZQK0 1506 aa16.7■□□□□ 0.26
Pabpc1-201ENSMUST00000001809 Gm38655A0A286YDK6 273 aa16.69■□□□□ 0.26
Pabpc1-201ENSMUST00000001809 Eea1Q8BL66 1411 aa16.65■□□□□ 0.26
Pabpc1-201ENSMUST00000001809 Aplp2Q06335 707 aa16.64■□□□□ 0.25
Pabpc1-201ENSMUST00000001809 CenpbP27790 599 aa16.64■□□□□ 0.25
Pabpc1-201ENSMUST00000001809 Arhgap35Q91YM2 1499 aa16.63■□□□□ 0.25
Pabpc1-201ENSMUST00000001809 Eif4g1Q6NZJ6 1600 aaKnown RBP16.62■□□□□ 0.25
Pabpc1-201ENSMUST00000001809 Setd5Q5XJV7 1441 aa16.62■□□□□ 0.25
Pabpc1-201ENSMUST00000001809 Atad2bE9Q166 1460 aaKnown RBP16.62■□□□□ 0.25
Pabpc1-201ENSMUST00000001809 PtprkP35822 1457 aa16.6■□□□□ 0.25
Pabpc1-201ENSMUST00000001809 Arap1Q4LDD4 1452 aa16.58■□□□□ 0.24
Pabpc1-201ENSMUST00000001809 Mapk8ip2Q9ERE9 830 aa16.55■□□□□ 0.24
Pabpc1-201ENSMUST00000001809 Fam50aQ9WV03 339 aaKnown RBP16.55■□□□□ 0.24
Pabpc1-201ENSMUST00000001809 Kif15Q6P9L6 1387 aa16.54■□□□□ 0.24
Pabpc1-201ENSMUST00000001809 Ttbk1Q6PCN3 1308 aa16.53■□□□□ 0.24
Pabpc1-201ENSMUST00000001809 TnnQ80Z71 1560 aa16.52■□□□□ 0.23
Pabpc1-201ENSMUST00000001809 Pds5bQ4VA53 1446 aaKnown RBP16.5■□□□□ 0.23
Pabpc1-201ENSMUST00000001809 BlmO88700 1416 aa16.5■□□□□ 0.23
Pabpc1-201ENSMUST00000001809 Lmod2Q3UHZ5 550 aa16.49■□□□□ 0.23
Pabpc1-201ENSMUST00000001809 Ccdc18Q640L5 1455 aa16.48■□□□□ 0.23
Pabpc1-201ENSMUST00000001809 NrkQ9R0G8 1455 aa16.48■□□□□ 0.23
Pabpc1-201ENSMUST00000001809 Arhgef5E9Q7D5 1581 aa16.48■□□□□ 0.23
Pabpc1-201ENSMUST00000001809 NclP09405 707 aaKnown RBP16.47■□□□□ 0.23
Pabpc1-201ENSMUST00000001809 Shroom4Q1W617 1475 aa16.44■□□□□ 0.22
Pabpc1-201ENSMUST00000001809 Frmpd1A2AKB4 1549 aa16.43■□□□□ 0.22
Pabpc1-201ENSMUST00000001809 Baz1bQ9Z277 1479 aa16.42■□□□□ 0.22
Pabpc1-201ENSMUST00000001809 Hnrnpul2Q00PI9 745 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms