RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeastyeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDB1YPR184W YPR078CQ06813 372 aa5.51□□□□□ -1.53
GDB1YPR184W FAS2P19097 1887 aaKnown RBP5.51□□□□□ -1.53
GDB1YPR184W KAR3P17119 729 aa5.51□□□□□ -1.53
GDB1YPR184W SWC3P31376 625 aa5.51□□□□□ -1.53
GDB1YPR184W PTK1P36002 662 aaPredicted RBP5.51□□□□□ -1.53
GDB1YPR184W HMF1P40037 129 aaKnown RBP5.51□□□□□ -1.53
GDB1YPR184W VHR2P40041 505 aa5.51□□□□□ -1.53
GDB1YPR184W DJP1P40564 432 aa5.51□□□□□ -1.53
GDB1YPR184W YGL140CP53120 1219 aa5.51□□□□□ -1.53
GDB1YPR184W INM2Q05533 292 aa5.51□□□□□ -1.53
GDB1YPR184W RRP6Q12149 733 aaKnown RBP5.51□□□□□ -1.53
GDB1YPR184W TRK1P12685 1235 aa5.5□□□□□ -1.53
GDB1YPR184W SRO9P25567 434 aaKnown RBP5.5□□□□□ -1.53
GDB1YPR184W TOA1P32773 286 aa5.5□□□□□ -1.53
GDB1YPR184W UBP15P50101 1230 aa5.5□□□□□ -1.53
GDB1YPR184W UTP13Q05946 817 aaKnown RBP5.5□□□□□ -1.53
GDB1YPR184W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
GDB1YPR184W PRX1P34227 261 aaKnown RBP5.5□□□□□ -1.53
GDB1YPR184W RGD2P43556 714 aa5.5□□□□□ -1.53
GDB1YPR184W CCM1P48237 864 aaPredicted RBP5.5□□□□□ -1.53
GDB1YPR184W THI3Q07471 609 aa5.5□□□□□ -1.53
GDB1YPR184W TUS1Q06412 1307 aa5.5□□□□□ -1.53
GDB1YPR184W SEC23P15303 768 aaKnown RBP5.5□□□□□ -1.53
GDB1YPR184W BMH2P34730 273 aaKnown RBP5.5□□□□□ -1.53
GDB1YPR184W YDL073WQ07454 984 aa5.5□□□□□ -1.53
GDB1YPR184W THS1P04801 734 aaKnown RBP5.49□□□□□ -1.53
GDB1YPR184W CBP1P07252 654 aa5.49□□□□□ -1.53
GDB1YPR184W HST1P53685 503 aa5.49□□□□□ -1.53
GDB1YPR184W GYP5Q12344 894 aa5.49□□□□□ -1.53
GDB1YPR184W CYC8P14922 966 aa5.49□□□□□ -1.53
GDB1YPR184W RIT1P23796 513 aa5.49□□□□□ -1.53
GDB1YPR184W SSE1P32589 693 aaKnown RBP5.49□□□□□ -1.53
GDB1YPR184W REV7P38927 245 aa5.49□□□□□ -1.53
GDB1YPR184W RNR4P49723 345 aaKnown RBP5.49□□□□□ -1.53
GDB1YPR184W HOS3Q02959 697 aaKnown RBP5.49□□□□□ -1.53
GDB1YPR184W YIL092WP40497 633 aa5.49□□□□□ -1.53
GDB1YPR184W APT1P49435 187 aaKnown RBP5.49□□□□□ -1.53
GDB1YPR184W RPT4P53549 437 aaKnown RBP5.49□□□□□ -1.53
GDB1YPR184W NOT3P06102 836 aaKnown RBP5.49□□□□□ -1.53
GDB1YPR184W VMA2P16140 517 aaKnown RBP5.49□□□□□ -1.53
GDB1YPR184W PER1P25625 357 aa5.49□□□□□ -1.53
GDB1YPR184W SPB4P25808 606 aaPredicted RBP5.49□□□□□ -1.53
GDB1YPR184W DEP1P31385 405 aa5.49□□□□□ -1.53
GDB1YPR184W YGR237CP50089 785 aa5.49□□□□□ -1.53
GDB1YPR184W MSC6Q08818 692 aaKnown RBP5.49□□□□□ -1.53
GDB1YPR184W SSK22P25390 1331 aaPredicted RBP5.49□□□□□ -1.53
GDB1YPR184W NDI1P32340 513 aa5.48□□□□□ -1.53
GDB1YPR184W CCL1P37366 393 aa5.48□□□□□ -1.53
GDB1YPR184W PEX19Q07418 342 aa5.48□□□□□ -1.53
GDB1YPR184W RPN8Q08723 338 aaKnown RBP5.48□□□□□ -1.53
GDB1YPR184W VPS5Q92331 675 aa5.48□□□□□ -1.53
GDB1YPR184W PKC1P24583 1151 aa5.48□□□□□ -1.53
GDB1YPR184W AFG2P32794 780 aa5.48□□□□□ -1.53
GDB1YPR184W BOI2P39969 1040 aa5.48□□□□□ -1.53
GDB1YPR184W YJR107WP47145 328 aa5.48□□□□□ -1.53
GDB1YPR184W EFM6P53970 246 aa5.48□□□□□ -1.53
GDB1YPR184W SEC5P89102 971 aa5.48□□□□□ -1.53
GDB1YPR184W RPT6Q01939 405 aaKnown RBP5.48□□□□□ -1.53
GDB1YPR184W VPS20Q04272 221 aa5.48□□□□□ -1.53
GDB1YPR184W OMS1Q06668 471 aa5.48□□□□□ -1.53
GDB1YPR184W RAD24P32641 659 aa5.48□□□□□ -1.53
GDB1YPR184W TIF5P38431 405 aaKnown RBP5.48□□□□□ -1.53
GDB1YPR184W RSC1P53236 928 aa5.48□□□□□ -1.53
GDB1YPR184W TBF1Q02457 562 aa5.48□□□□□ -1.53
GDB1YPR184W REI1P38344 393 aaPredicted RBP5.47□□□□□ -1.53
GDB1YPR184W VIP1Q06685 1146 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W ILV1P00927 576 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W SNA3P14359 133 aa5.47□□□□□ -1.53
GDB1YPR184W PPX1P38698 397 aa5.47□□□□□ -1.53
GDB1YPR184W SET2P46995 733 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W NOC3Q07896 663 aaPredicted RBP5.47□□□□□ -1.53
GDB1YPR184W ELG1Q12050 791 aa5.47□□□□□ -1.53
GDB1YPR184W MNL2Q12205 849 aa5.47□□□□□ -1.53
GDB1YPR184W LSP1Q12230 341 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W SSB1P11484 613 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W PGI1P12709 554 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W RAM2P29703 316 aa5.47□□□□□ -1.53
GDB1YPR184W PTP3P40048 928 aa5.47□□□□□ -1.53
GDB1YPR184W SSB2P40150 613 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W HEF3P53978 1044 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W PCL8Q08966 492 aa5.47□□□□□ -1.53
GDB1YPR184W CDC8P00572 216 aa5.47□□□□□ -1.53
GDB1YPR184W ICL1P28240 557 aaPredicted RBP5.47□□□□□ -1.53
GDB1YPR184W MGM1P32266 881 aa5.47□□□□□ -1.53
GDB1YPR184W GLC3P32775 704 aa5.47□□□□□ -1.53
GDB1YPR184W PIN4P34217 668 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
GDB1YPR184W GUA1P38625 525 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W YMR147WP40218 223 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W NIT1P40447 199 aa5.47□□□□□ -1.53
GDB1YPR184W FOL1P53848 824 aa5.47□□□□□ -1.53
GDB1YPR184W ADE16P54113 591 aaKnown RBP5.47□□□□□ -1.53
GDB1YPR184W MRPL25P23369 157 aa5.46□□□□□ -1.53
GDB1YPR184W CNS1P33313 385 aa5.46□□□□□ -1.53
GDB1YPR184W PGM1P33401 570 aaKnown RBP5.46□□□□□ -1.53
GDB1YPR184W STO1P34160 861 aaKnown RBP5.46□□□□□ -1.53
GDB1YPR184W CRG1P38892 291 aaRIP-Chip data5.46□□□□□ -1.53not detected
GDB1YPR184W YNL193WP53870 558 aa5.46□□□□□ -1.53
GDB1YPR184W NYV1Q12255 253 aa5.46□□□□□ -1.53
GDB1YPR184W TY4A-HQ6Q5P6 413 aa5.46□□□□□ -1.53
GDB1YPR184W RSR1P13856 272 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 302.4 ms