RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
CMR3	YPR013C	YKL077W	P36081	392 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	RDH54	P38086	958 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	GEM1	P39722	662 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	SNF7	P39929	240 aa	Known RBP	5.61	□□□□□ -1.51
CMR3	YPR013C	YER156C	P40093	338 aa	Known RBP	5.61	□□□□□ -1.51
CMR3	YPR013C	ALR2	P43553	858 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	PPT1	P53043	513 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	RTA1	P53047	317 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	ROD1	Q02805	837 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	UGO1	Q03327	502 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	HPF1	Q05164	967 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	YDL124W	Q07551	312 aa	Known RBP	5.61	□□□□□ -1.51
CMR3	YPR013C	REC8	Q12188	680 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	SRF1	Q12516	437 aa		5.61	□□□□□ -1.51
CMR3	YPR013C	RPP1A	P05318	106 aa	Predicted RBP	5.6	□□□□□ -1.51
CMR3	YPR013C	FUS1	P11710	512 aa		5.6	□□□□□ -1.51
CMR3	YPR013C	INO1	P11986	533 aa		5.6	□□□□□ -1.51
CMR3	YPR013C	PAF1	P38351	445 aa		5.6	□□□□□ -1.51
CMR3	YPR013C	GLO4	Q12320	285 aa		5.6	□□□□□ -1.51
CMR3	YPR013C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
CMR3	YPR013C	MOT2	P34909	587 aa	Known RBP	5.59	□□□□□ -1.51
CMR3	YPR013C	YJR098C	P47139	656 aa		5.59	□□□□□ -1.51
CMR3	YPR013C	HSV2	P50079	448 aa	Predicted RBP	5.59	□□□□□ -1.51
CMR3	YPR013C	UBP15	P50101	1230 aa		5.59	□□□□□ -1.51
CMR3	YPR013C	SCW11	P53189	542 aa		5.59	□□□□□ -1.51
CMR3	YPR013C	FOL1	P53848	824 aa		5.59	□□□□□ -1.51
CMR3	YPR013C	TFB2	Q02939	513 aa		5.59	□□□□□ -1.51
CMR3	YPR013C	RKM4	Q12504	494 aa		5.59	□□□□□ -1.51
CMR3	YPR013C	TRK2	P28584	889 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	MKK2	P32491	506 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	SCT1	P32784	759 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	PEX6	P33760	1030 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	BET3	P36149	193 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	EXO5	P38289	585 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	ENP1	P38333	483 aa	Known RBP	5.58	□□□□□ -1.52
CMR3	YPR013C	MTR4	P47047	1073 aa	Known RBP	5.58	□□□□□ -1.52
CMR3	YPR013C	HLJ1	P48353	224 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	LSC2	P53312	427 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	TIF35	Q04067	274 aa	Known RBP	5.58	□□□□□ -1.52
CMR3	YPR013C	YLR346C	Q06139	101 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	EST2	Q06163	884 aa		5.58	□□□□□ -1.52
CMR3	YPR013C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.57	□□□□□ -1.52	not detected
CMR3	YPR013C	IDI1	P15496	288 aa		5.57	□□□□□ -1.52
CMR3	YPR013C	SYP1	P25623	870 aa	Known RBP	5.57	□□□□□ -1.52
CMR3	YPR013C	YKL107W	P34251	309 aa		5.57	□□□□□ -1.52
CMR3	YPR013C	MRPL16	P38064	232 aa		5.57	□□□□□ -1.52
CMR3	YPR013C	PMC1	P38929	1173 aa	Predicted RBP	5.57	□□□□□ -1.52
CMR3	YPR013C	YGR035C	P53222	116 aa		5.57	□□□□□ -1.52
CMR3	YPR013C	ATG13	Q06628	738 aa		5.57	□□□□□ -1.52
CMR3	YPR013C	GIC2	Q06648	383 aa		5.57	□□□□□ -1.52
CMR3	YPR013C	DED1	P06634	604 aa	Known RBP	5.56	□□□□□ -1.52
CMR3	YPR013C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.56	□□□□□ -1.52	not detected
CMR3	YPR013C	MBP1	P39678	833 aa		5.56	□□□□□ -1.52
CMR3	YPR013C	GDH3	P39708	457 aa		5.56	□□□□□ -1.52
CMR3	YPR013C	INP51	P40559	946 aa	Known RBP	5.56	□□□□□ -1.52
CMR3	YPR013C	YGL176C	P46945	554 aa		5.56	□□□□□ -1.52
CMR3	YPR013C	PMT3	P47190	753 aa		5.56	□□□□□ -1.52
CMR3	YPR013C	YGR237C	P50089	785 aa		5.56	□□□□□ -1.52
CMR3	YPR013C	BIO5	P53744	561 aa	Known RBP	5.56	□□□□□ -1.52
CMR3	YPR013C	BUD21	Q08492	214 aa	Predicted RBP	5.56	□□□□□ -1.52
CMR3	YPR013C	HVG1	P0CE11	249 aa		5.55	□□□□□ -1.52
CMR3	YPR013C	DBP5	P20449	482 aa	Known RBP	5.55	□□□□□ -1.52
CMR3	YPR013C	CDC11	P32458	415 aa		5.55	□□□□□ -1.52
CMR3	YPR013C	ADD66	P36040	267 aa		5.55	□□□□□ -1.52
CMR3	YPR013C	CCC2	P38995	1004 aa		5.55	□□□□□ -1.52
CMR3	YPR013C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.55	□□□□□ -1.52	not detected
CMR3	YPR013C	CNN1	P43618	361 aa		5.55	□□□□□ -1.52
CMR3	YPR013C	YJL181W	P46987	611 aa		5.55	□□□□□ -1.52
CMR3	YPR013C	YJR124C	P47159	448 aa		5.55	□□□□□ -1.52
CMR3	YPR013C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.55	□□□□□ -1.52	RIP-Chip
CMR3	YPR013C	HEH2	Q03281	663 aa		5.55	□□□□□ -1.52
CMR3	YPR013C	HTS1	P07263	546 aa	Known RBP	5.54	□□□□□ -1.52
CMR3	YPR013C	SEC6	P32844	805 aa		5.54	□□□□□ -1.52
CMR3	YPR013C	MCM7	P38132	845 aa		5.54	□□□□□ -1.52
CMR3	YPR013C	AMN1	P38285	549 aa	Predicted RBP	5.54	□□□□□ -1.52
CMR3	YPR013C	FET4	P40988	552 aa		5.54	□□□□□ -1.52
CMR3	YPR013C	YNL193W	P53870	558 aa		5.54	□□□□□ -1.52
CMR3	YPR013C	TCB1	Q12466	1186 aa		5.54	□□□□□ -1.52
CMR3	YPR013C	HBN1	Q96VH4	193 aa		5.54	□□□□□ -1.52
CMR3	YPR013C	NUP145	P49687	1317 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	TOM70	P07213	617 aa	Known RBP	5.53	□□□□□ -1.52
CMR3	YPR013C	ATG14	P38270	344 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	ROG3	P43602	733 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.53	□□□□□ -1.52	not detected
CMR3	YPR013C	MAL11	P53048	616 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	PEX8	P53248	589 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	UTP22	P53254	1237 aa	Predicted RBP	5.53	□□□□□ -1.52
CMR3	YPR013C	TPO2	P53283	614 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	YNR065C	P53751	1116 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	RAT1	Q02792	1006 aa	Known RBP	5.53	□□□□□ -1.52
CMR3	YPR013C	UTP5	Q04177	643 aa	Known RBP	5.53	□□□□□ -1.52
CMR3	YPR013C	TY1A-MR1	Q04215	440 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	AOS1	Q06624	347 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	YPL066W	Q12194	479 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	TMA17	Q12513	150 aa		5.53	□□□□□ -1.52
CMR3	YPR013C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.52	□□□□□ -1.53
CMR3	YPR013C	TY1A-DR6	P0CX70	440 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	TY1A-ER1	P0CX71	440 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	TY1A-LR2	P0CX72	440 aa		5.52	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms