RNA–Protein interactions for RNA: YPL253C

VIK1, Transcript of Protein that forms a kinesin-14 heterodimeric motor with Kar3p, yeast

Gene VIK1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIK1	YPL253C	MSE1	P48525	536 aa		3.22	□□□□□ -1.89
VIK1	YPL253C	SUN4	P53616	420 aa		3.21	□□□□□ -1.9
VIK1	YPL253C	RSA3	Q05942	220 aa	Known RBP	3.21	□□□□□ -1.9
VIK1	YPL253C	SGD1	Q06132	899 aa		3.21	□□□□□ -1.9
VIK1	YPL253C	SRO9	P25567	434 aa	Known RBP	3.21	□□□□□ -1.9
VIK1	YPL253C	RVS167	P39743	482 aa	Known RBP	3.21	□□□□□ -1.9
VIK1	YPL253C	QDR1	P40475	563 aa		3.21	□□□□□ -1.9
VIK1	YPL253C	MON1	P53129	644 aa		3.21	□□□□□ -1.9
VIK1	YPL253C	YJL045W	P47052	634 aa		3.2	□□□□□ -1.9
VIK1	YPL253C	KAR5	Q04746	504 aa		3.2	□□□□□ -1.9
VIK1	YPL253C	DUS4	Q06063	367 aa		3.2	□□□□□ -1.9
VIK1	YPL253C	RSC58	Q07979	502 aa		3.2	□□□□□ -1.9
VIK1	YPL253C	RCL1	Q08096	367 aa	Predicted RBP	3.2	□□□□□ -1.9
VIK1	YPL253C	INP54	Q08227	384 aa	Known RBP	3.2	□□□□□ -1.9
VIK1	YPL253C	SPS1	P08458	490 aa		3.19	□□□□□ -1.9
VIK1	YPL253C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	RIP-Chip
VIK1	YPL253C	PLB2	Q03674	706 aa		3.19	□□□□□ -1.9
VIK1	YPL253C	UTP5	Q04177	643 aa	Known RBP	3.19	□□□□□ -1.9
VIK1	YPL253C	RLF2	Q12495	606 aa		3.19	□□□□□ -1.9
VIK1	YPL253C	CYC1	P00044	109 aa	Predicted RBP	3.19	□□□□□ -1.9
VIK1	YPL253C	CDC55	Q00362	526 aa		3.19	□□□□□ -1.9
VIK1	YPL253C	ROT1	Q03691	256 aa		3.19	□□□□□ -1.9
VIK1	YPL253C	HRK1	Q08732	759 aa	Known RBP	3.19	□□□□□ -1.9
VIK1	YPL253C	ACF4	P47129	309 aa		3.18	□□□□□ -1.9
VIK1	YPL253C	ATG1	P53104	897 aa		3.18	□□□□□ -1.9
VIK1	YPL253C	NOG1	Q02892	647 aa	Known RBP	3.18	□□□□□ -1.9
VIK1	YPL253C	YOR352W	Q08816	343 aa		3.18	□□□□□ -1.9
VIK1	YPL253C	RPL34A	P87262	121 aa	Predicted RBP	3.17	□□□□□ -1.9
VIK1	YPL253C	CTF4	Q01454	927 aa		3.17	□□□□□ -1.9
VIK1	YPL253C	TRS120	Q04183	1289 aa		3.17	□□□□□ -1.9
VIK1	YPL253C	RAD53	P22216	821 aa		3.17	□□□□□ -1.9
VIK1	YPL253C	HCM1	P25364	564 aa		3.17	□□□□□ -1.9
VIK1	YPL253C	YSC84	P32793	468 aa		3.17	□□□□□ -1.9
VIK1	YPL253C	DOM34	P33309	386 aa		3.17	□□□□□ -1.9
VIK1	YPL253C	LST4	P34239	828 aa		3.17	□□□□□ -1.9
VIK1	YPL253C	XKS1	P42826	600 aa		3.17	□□□□□ -1.9
VIK1	YPL253C	MTR4	P47047	1073 aa	Known RBP	3.16	□□□□□ -1.9
VIK1	YPL253C	ENV11	P53246	860 aa		3.16	□□□□□ -1.9
VIK1	YPL253C	YNR063W	P53749	607 aa		3.16	□□□□□ -1.9
VIK1	YPL253C	LAP2	Q10740	671 aa		3.16	□□□□□ -1.9
VIK1	YPL253C	NTO1	Q12311	748 aa		3.16	□□□□□ -1.9
VIK1	YPL253C	TRL1	P09880	827 aa	Known RBP	3.15	□□□□□ -1.9
VIK1	YPL253C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.9	RIP-Chip
VIK1	YPL253C	HSE1	P38753	452 aa		3.15	□□□□□ -1.9
VIK1	YPL253C	QNS1	P38795	714 aa	Known RBP	3.15	□□□□□ -1.9
VIK1	YPL253C	SHU2	P38957	223 aa		3.15	□□□□□ -1.9
VIK1	YPL253C	SPO21	Q12411	609 aa		3.15	□□□□□ -1.9
VIK1	YPL253C	MSH3	P25336	1018 aa		3.15	□□□□□ -1.91
VIK1	YPL253C	CHS7	P38843	316 aa		3.15	□□□□□ -1.91
VIK1	YPL253C	HNT2	P49775	206 aa		3.15	□□□□□ -1.91
VIK1	YPL253C	PHO23	P50947	330 aa		3.15	□□□□□ -1.91
VIK1	YPL253C	NBA1	Q08229	501 aa	Known RBP	3.15	□□□□□ -1.91
VIK1	YPL253C	SRM1	P21827	482 aa		3.14	□□□□□ -1.91
VIK1	YPL253C	CDC20	P26309	610 aa		3.14	□□□□□ -1.91
VIK1	YPL253C	MCM6	P53091	1017 aa	Known RBP	3.14	□□□□□ -1.91
VIK1	YPL253C	PMI40	P29952	429 aa	Known RBP	3.13	□□□□□ -1.91
VIK1	YPL253C	SEC26	P41810	973 aa	Known RBP	3.13	□□□□□ -1.91
VIK1	YPL253C	MNN10	P50108	393 aa	Known RBP	3.13	□□□□□ -1.91
VIK1	YPL253C	TMA10	Q06177	86 aa		3.13	□□□□□ -1.91
VIK1	YPL253C	CDC6	P09119	513 aa		3.13	□□□□□ -1.91
VIK1	YPL253C	AIM21	P40563	679 aa		3.13	□□□□□ -1.91
VIK1	YPL253C	GPI13	Q07830	1017 aa		3.13	□□□□□ -1.91
VIK1	YPL253C	BAP2	P38084	609 aa		3.12	□□□□□ -1.91
VIK1	YPL253C	PEX13	P80667	386 aa		3.12	□□□□□ -1.91
VIK1	YPL253C	GAL10	P04397	699 aa		3.11	□□□□□ -1.91
VIK1	YPL253C	STE11	P23561	717 aa		3.11	□□□□□ -1.91
VIK1	YPL253C	MDJ2	P42834	146 aa		3.11	□□□□□ -1.91
VIK1	YPL253C	ACK1	Q07622	623 aa	Predicted RBP	3.11	□□□□□ -1.91
VIK1	YPL253C	SSA1	P10591	642 aa	Known RBP	3.11	□□□□□ -1.91
VIK1	YPL253C	VMA4	P22203	233 aa	Known RBP	3.11	□□□□□ -1.91
VIK1	YPL253C	GRS1	P38088	690 aa	Known RBP	3.11	□□□□□ -1.91
VIK1	YPL253C	ERP5	P38819	212 aa		3.11	□□□□□ -1.91
VIK1	YPL253C	KIN4	Q01919	800 aa		3.11	□□□□□ -1.91
VIK1	YPL253C	RXT3	Q07458	294 aa		3.11	□□□□□ -1.91
VIK1	YPL253C	FRT1	Q99332	602 aa		3.11	□□□□□ -1.91
VIK1	YPL253C	KIP1	P28742	1111 aa		3.1	□□□□□ -1.91
VIK1	YPL253C	UGA4	P32837	571 aa		3.1	□□□□□ -1.91
VIK1	YPL253C	YCS4	Q06156	1176 aa		3.1	□□□□□ -1.91
VIK1	YPL253C	NOC3	Q07896	663 aa	Predicted RBP	3.1	□□□□□ -1.91
VIK1	YPL253C	CDC3	P32457	520 aa	Known RBP	3.09	□□□□□ -1.91
VIK1	YPL253C	GPB2	P39717	880 aa		3.09	□□□□□ -1.91
VIK1	YPL253C	VPS53	P47061	822 aa		3.09	□□□□□ -1.91
VIK1	YPL253C	GPB1	Q08886	897 aa		3.09	□□□□□ -1.91
VIK1	YPL253C	COQ4	O13525	335 aa		3.09	□□□□□ -1.92
VIK1	YPL253C	PMA1	P05030	918 aa	Known RBP	3.09	□□□□□ -1.92
VIK1	YPL253C	HEM13	P11353	328 aa	Known RBP	3.09	□□□□□ -1.92
VIK1	YPL253C	CMP2	P14747	604 aa		3.09	□□□□□ -1.92
VIK1	YPL253C	RDH54	P38086	958 aa		3.09	□□□□□ -1.92
VIK1	YPL253C	CCZ1	P38273	704 aa		3.09	□□□□□ -1.92
VIK1	YPL253C	SAM37	P50110	327 aa		3.09	□□□□□ -1.92
VIK1	YPL253C	NUT2	Q06213	157 aa		3.09	□□□□□ -1.92
VIK1	YPL253C	SNF5	P18480	905 aa		3.08	□□□□□ -1.92
VIK1	YPL253C	DEF1	P35732	738 aa	Known RBP	3.08	□□□□□ -1.92
VIK1	YPL253C	ADD66	P36040	267 aa		3.08	□□□□□ -1.92
VIK1	YPL253C	ATG14	P38270	344 aa		3.08	□□□□□ -1.92
VIK1	YPL253C	MSS4	P38994	779 aa		3.08	□□□□□ -1.92
VIK1	YPL253C	HOS3	Q02959	697 aa	Known RBP	3.08	□□□□□ -1.92
VIK1	YPL253C	RKM2	Q03942	479 aa		3.08	□□□□□ -1.92
VIK1	YPL253C	YBL113C	Q7M4S9	792 aa		3.08	□□□□□ -1.92
VIK1	YPL253C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms