RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W SSP1P38871 571 aa6.24□□□□□ -1.41
SSO1YPL232W IRC8P47046 822 aa6.24□□□□□ -1.41
SSO1YPL232W POL32P47110 350 aa6.24□□□□□ -1.41
SSO1YPL232W EMI2Q04409 500 aaKnown RBP6.24□□□□□ -1.41
SSO1YPL232W KAR5Q04746 504 aa6.24□□□□□ -1.41
SSO1YPL232W SPT2P06843 333 aaPredicted RBP6.23□□□□□ -1.41
SSO1YPL232W SWI6P09959 803 aa6.23□□□□□ -1.41
SSO1YPL232W POL3P15436 1097 aa6.23□□□□□ -1.41
SSO1YPL232W URK1P27515 501 aa6.23□□□□□ -1.41
SSO1YPL232W SEC8P32855 1065 aa6.23□□□□□ -1.41
SSO1YPL232W RTS1P38903 757 aa6.23□□□□□ -1.41
SSO1YPL232W VID27P40157 782 aa6.23□□□□□ -1.41
SSO1YPL232W INP52P50942 1183 aa6.23□□□□□ -1.41
SSO1YPL232W ART5P53244 586 aaKnown RBP6.23□□□□□ -1.41
SSO1YPL232W RAD59Q12223 238 aa6.23□□□□□ -1.41
SSO1YPL232W RAD61Q99359 647 aa6.23□□□□□ -1.41
SSO1YPL232W MAS2P11914 482 aa6.22□□□□□ -1.41
SSO1YPL232W FMP10P40098 244 aa6.22□□□□□ -1.41
SSO1YPL232W YMR147WP40218 223 aaKnown RBP6.22□□□□□ -1.41
SSO1YPL232W GUD1Q07729 489 aa6.22□□□□□ -1.41
SSO1YPL232W AIR2Q12476 344 aaKnown RBP6.22□□□□□ -1.41
SSO1YPL232W YLR422WQ06409 1932 aa6.22□□□□□ -1.41
SSO1YPL232W SEN1Q00416 2231 aaKnown RBP6.21□□□□□ -1.42
SSO1YPL232W SYN8P31377 255 aa6.21□□□□□ -1.42
SSO1YPL232W DSF2P38213 736 aa6.21□□□□□ -1.42
SSO1YPL232W REG2P38232 338 aa6.21□□□□□ -1.42
SSO1YPL232W TVP23P38962 199 aa6.21□□□□□ -1.42
SSO1YPL232W YGL242CP53066 181 aa6.21□□□□□ -1.42
SSO1YPL232W MET13P53128 600 aa6.21□□□□□ -1.42
SSO1YPL232W YGR035CP53222 116 aa6.21□□□□□ -1.42
SSO1YPL232W NCB2Q92317 146 aa6.21□□□□□ -1.42
SSO1YPL232W CCH1P50077 2039 aa6.21□□□□□ -1.42
SSO1YPL232W STB5P38699 743 aa6.2□□□□□ -1.42
SSO1YPL232W PES4P39684 611 aa6.2□□□□□ -1.42
SSO1YPL232W SPO74P45819 413 aa6.2□□□□□ -1.42
SSO1YPL232W HEH2Q03281 663 aa6.2□□□□□ -1.42
SSO1YPL232W MSC2Q03455 724 aa6.2□□□□□ -1.42
SSO1YPL232W ESF1Q06344 628 aaKnown RBP6.2□□□□□ -1.42
SSO1YPL232W ATG11Q12527 1178 aa6.2□□□□□ -1.42
SSO1YPL232W YNG2P38806 282 aaKnown RBP6.19□□□□□ -1.42
SSO1YPL232W VPS8P39702 1274 aa6.19□□□□□ -1.42
SSO1YPL232W ALD5P40047 520 aaKnown RBP6.19□□□□□ -1.42
SSO1YPL232W ULI1P43604 169 aa6.19□□□□□ -1.42
SSO1YPL232W SPO1P53541 631 aa6.19□□□□□ -1.42
SSO1YPL232W SKY1Q03656 742 aa6.19□□□□□ -1.42
SSO1YPL232W PRO3P32263 286 aaKnown RBP6.18□□□□□ -1.42
SSO1YPL232W FPR3P38911 411 aaKnown RBP6.18□□□□□ -1.42
SSO1YPL232W INP51P40559 946 aaKnown RBP6.18□□□□□ -1.42
SSO1YPL232W YML020WQ03722 664 aa6.18□□□□□ -1.42
SSO1YPL232W MRD1Q06106 887 aaKnown RBP6.18□□□□□ -1.42
SSO1YPL232W CUP1-1P0CX80 61 aa6.17□□□□□ -1.42
SSO1YPL232W CUP1-2P0CX81 61 aa6.17□□□□□ -1.42
SSO1YPL232W ACE2P21192 770 aa6.17□□□□□ -1.42
SSO1YPL232W AFT1P22149 690 aa6.17□□□□□ -1.42
SSO1YPL232W FUB1P25659 250 aa6.17□□□□□ -1.42
SSO1YPL232W RPS7BP48164 190 aaKnown RBP6.17□□□□□ -1.42
SSO1YPL232W MLC1P53141 149 aa6.17□□□□□ -1.42
SSO1YPL232W ALO1P54783 526 aaKnown RBP6.17□□□□□ -1.42
SSO1YPL232W UTP4Q06679 776 aaKnown RBP6.17□□□□□ -1.42
SSO1YPL232W FMP27Q06179 2628 aa6.16□□□□□ -1.42
SSO1YPL232W IRA2P19158 3079 aa6.16□□□□□ -1.42
SSO1YPL232W COQ1P18900 473 aa6.16□□□□□ -1.42
SSO1YPL232W ILV3P39522 585 aaKnown RBP6.16□□□□□ -1.42
SSO1YPL232W SLN1P39928 1220 aaPredicted RBP6.16□□□□□ -1.42
SSO1YPL232W HUL4P40985 892 aa6.16□□□□□ -1.42
SSO1YPL232W ENP2P48234 707 aaKnown RBP6.16□□□□□ -1.42
SSO1YPL232W CTR1P49573 406 aa6.16□□□□□ -1.42
SSO1YPL232W FOL1P53848 824 aa6.16□□□□□ -1.42
SSO1YPL232W RKM4Q12504 494 aa6.16□□□□□ -1.42
SSO1YPL232W TY1B-AO13527 1196 aaKnown RBP6.15□□□□□ -1.42
SSO1YPL232W CHO2P05374 869 aaKnown RBP6.15□□□□□ -1.42
SSO1YPL232W NOT3P06102 836 aaKnown RBP6.15□□□□□ -1.42
SSO1YPL232W MSD1P15179 658 aaKnown RBP6.15□□□□□ -1.42
SSO1YPL232W PPZ1P26570 692 aa6.15□□□□□ -1.42
SSO1YPL232W EAP1P36041 632 aaKnown RBP6.15□□□□□ -1.42
SSO1YPL232W VPS45P38932 577 aa6.15□□□□□ -1.42
SSO1YPL232W VPS27P40343 622 aaKnown RBP6.15□□□□□ -1.42
SSO1YPL232W YIL092WP40497 633 aa6.15□□□□□ -1.42
SSO1YPL232W BDP1P46678 594 aa6.15□□□□□ -1.42
SSO1YPL232W VPS30Q02948 557 aa6.15□□□□□ -1.42
SSO1YPL232W PKH3Q03306 898 aaPredicted RBP6.15□□□□□ -1.42
SSO1YPL232W LCD1Q04377 747 aa6.15□□□□□ -1.42
SSO1YPL232W SUE1Q06524 206 aa6.15□□□□□ -1.42
SSO1YPL232W TAH18Q12181 623 aa6.15□□□□□ -1.42
SSO1YPL232W MBR1P23493 339 aa6.14□□□□□ -1.43
SSO1YPL232W KIN82P25341 720 aa6.14□□□□□ -1.43
SSO1YPL232W SMY2P32909 740 aaKnown RBP6.14□□□□□ -1.43
SSO1YPL232W PBY1P38254 753 aa6.14□□□□□ -1.43
SSO1YPL232W OPT1P40897 799 aa6.14□□□□□ -1.43
SSO1YPL232W YMR1P47147 688 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
SSO1YPL232W LIF1P53150 421 aa6.14□□□□□ -1.43
SSO1YPL232W PTA1Q01329 785 aaPredicted RBP6.14□□□□□ -1.43
SSO1YPL232W ECM16Q04217 1267 aaKnown RBP6.14□□□□□ -1.43
SSO1YPL232W IRC10Q08118 586 aa6.14□□□□□ -1.43
SSO1YPL232W IOC2Q12072 812 aa6.14□□□□□ -1.43
SSO1YPL232W PDR18P53756 1333 aa6.14□□□□□ -1.43
SSO1YPL232W NUC1P08466 329 aa6.13□□□□□ -1.43
SSO1YPL232W KEX2P13134 814 aa6.13□□□□□ -1.43
SSO1YPL232W OSH3P38713 996 aaKnown RBP6.13□□□□□ -1.43
SSO1YPL232W RRP8P38961 392 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms