RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeastyeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOS3YPL116W MEF1P25039 761 aa4.42□□□□□ -1.7
HOS3YPL116W TPS2P31688 896 aaKnown RBP4.42□□□□□ -1.7
HOS3YPL116W EUG1P32474 517 aa4.42□□□□□ -1.7
HOS3YPL116W MRP8P35719 219 aa4.42□□□□□ -1.7
HOS3YPL116W TIF5P38431 405 aaKnown RBP4.42□□□□□ -1.7
HOS3YPL116W ATG3P40344 310 aa4.42□□□□□ -1.7
HOS3YPL116W VTC2P43585 828 aa4.42□□□□□ -1.7
HOS3YPL116W PEX14P53112 341 aa4.42□□□□□ -1.7
HOS3YPL116W SPO1P53541 631 aa4.42□□□□□ -1.7
HOS3YPL116W YNL144CP53907 740 aa4.42□□□□□ -1.7
HOS3YPL116W ARP5P53946 755 aa4.42□□□□□ -1.7
HOS3YPL116W YLR352WQ06479 807 aa4.42□□□□□ -1.7
HOS3YPL116W RSC3Q06639 885 aa4.42□□□□□ -1.7
HOS3YPL116W BDF2Q07442 638 aa4.42□□□□□ -1.7
HOS3YPL116W YDL144CQ07589 356 aa4.42□□□□□ -1.7
HOS3YPL116W LSO2Q3E772 92 aaKnown RBP4.42□□□□□ -1.7
HOS3YPL116W TSC11P40061 1430 aa4.41□□□□□ -1.7
HOS3YPL116W GAL1P04385 528 aa4.41□□□□□ -1.7
HOS3YPL116W RPS3P05750 240 aaKnown RBP4.41□□□□□ -1.7
HOS3YPL116W PMA2P19657 947 aa4.41□□□□□ -1.7
HOS3YPL116W DPB3P27344 201 aa4.41□□□□□ -1.7
HOS3YPL116W CPS1P27614 576 aa4.41□□□□□ -1.7
HOS3YPL116W URA1P28272 314 aaPredicted RBP4.41□□□□□ -1.7
HOS3YPL116W XRS2P33301 854 aa4.41□□□□□ -1.7
HOS3YPL116W RTG3P38165 486 aa4.41□□□□□ -1.7
HOS3YPL116W RIM11P38615 370 aa4.41□□□□□ -1.7
HOS3YPL116W RRF1P38771 230 aa4.41□□□□□ -1.7
HOS3YPL116W SET1P38827 1080 aaKnown RBP4.41□□□□□ -1.7
HOS3YPL116W SMC2P38989 1170 aaKnown RBP4.41□□□□□ -1.7
HOS3YPL116W CCT3P39077 534 aaKnown RBP4.41□□□□□ -1.7
HOS3YPL116W YJL070CP40361 888 aa4.41□□□□□ -1.7
HOS3YPL116W MNT3P40549 630 aa4.41□□□□□ -1.7
HOS3YPL116W PHB1P40961 287 aa4.41□□□□□ -1.7
HOS3YPL116W ATP22P50273 684 aaPredicted RBP4.41□□□□□ -1.7
HOS3YPL116W SDA1P53313 767 aaKnown RBP4.41□□□□□ -1.7
HOS3YPL116W ALG12P53730 551 aa4.41□□□□□ -1.7
HOS3YPL116W ULP1Q02724 621 aa4.41□□□□□ -1.7
HOS3YPL116W YML108WQ03759 105 aa4.41□□□□□ -1.7
HOS3YPL116W VAM6Q07468 1049 aa4.41□□□□□ -1.7
HOS3YPL116W CHS5Q12114 671 aaKnown RBP4.41□□□□□ -1.7
HOS3YPL116W YOL098CQ12496 1037 aa4.41□□□□□ -1.7
HOS3YPL116W NOT5Q12514 560 aaPredicted RBP4.41□□□□□ -1.7
HOS3YPL116W HIR3P47171 1648 aa4.41□□□□□ -1.7
HOS3YPL116W CDC37P06101 506 aaKnown RBP4.41□□□□□ -1.7
HOS3YPL116W MPH2P0CD99 609 aa4.41□□□□□ -1.7
HOS3YPL116W MRPS28P21771 286 aa4.41□□□□□ -1.7
HOS3YPL116W KRE6P32486 720 aa4.41□□□□□ -1.7
HOS3YPL116W STE13P33894 931 aa4.41□□□□□ -1.7
HOS3YPL116W MAK5P38112 773 aaPredicted RBP4.41□□□□□ -1.7
HOS3YPL116W SAK1P38990 1142 aa4.41□□□□□ -1.7
HOS3YPL116W RGA1P39083 1007 aa4.41□□□□□ -1.7
HOS3YPL116W ATG32P40458 529 aa4.41□□□□□ -1.7
HOS3YPL116W YIL055CP40523 627 aaKnown RBP4.41□□□□□ -1.7
HOS3YPL116W YJR142WP47173 342 aa4.41□□□□□ -1.7
HOS3YPL116W SSN8P47821 323 aa4.41□□□□□ -1.7
HOS3YPL116W ATH1P48016 1211 aa4.41□□□□□ -1.7
HOS3YPL116W NUP42P49686 430 aaKnown RBP4.41□□□□□ -1.7
HOS3YPL116W NUP84P52891 726 aa4.41□□□□□ -1.7
HOS3YPL116W TFB3Q03290 321 aa4.41□□□□□ -1.7
HOS3YPL116W YDR286CQ05530 114 aa4.41□□□□□ -1.7
HOS3YPL116W ALR1Q08269 859 aa4.41□□□□□ -1.7
HOS3YPL116W IOC2Q12072 812 aa4.41□□□□□ -1.7
HOS3YPL116W MCD1Q12158 566 aa4.41□□□□□ -1.7
HOS3YPL116W SSN2P38931 1420 aa4.4□□□□□ -1.7
HOS3YPL116W HIS3P06633 220 aa4.4□□□□□ -1.71
HOS3YPL116W PRP22P24384 1145 aaKnown RBP4.4□□□□□ -1.71
HOS3YPL116W BMH1P29311 267 aaKnown RBP4.4□□□□□ -1.71
HOS3YPL116W RSM22P36056 628 aa4.4□□□□□ -1.71
HOS3YPL116W TRZ1P36159 838 aaPredicted RBP4.4□□□□□ -1.71
HOS3YPL116W GUA1P38625 525 aaKnown RBP4.4□□□□□ -1.71
HOS3YPL116W VID27P40157 782 aa4.4□□□□□ -1.71
HOS3YPL116W SNZ3P43545 298 aa4.4□□□□□ -1.71
HOS3YPL116W TRF5P48561 642 aaKnown RBP4.4□□□□□ -1.71
HOS3YPL116W LSG1P53145 640 aaKnown RBP4.4□□□□□ -1.71
HOS3YPL116W SNZ2P53824 298 aa4.4□□□□□ -1.71
HOS3YPL116W ERO1Q03103 563 aa4.4□□□□□ -1.71
HOS3YPL116W HAS1Q03532 505 aaKnown RBP4.4□□□□□ -1.71
HOS3YPL116W TAF11Q04226 346 aa4.4□□□□□ -1.71
HOS3YPL116W ESC2Q06340 456 aa4.4□□□□□ -1.71
HOS3YPL116W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
HOS3YPL116W MSB4Q12317 492 aa4.4□□□□□ -1.71
HOS3YPL116W RTP1Q12751 981 aa4.4□□□□□ -1.71
HOS3YPL116W PDR18P53756 1333 aa4.4□□□□□ -1.71
HOS3YPL116W INH1P01097 85 aa4.39□□□□□ -1.71
HOS3YPL116W SSC1P0CS90 654 aaKnown RBP4.39□□□□□ -1.71
HOS3YPL116W PGI1P12709 554 aaKnown RBP4.39□□□□□ -1.71
HOS3YPL116W REB1P21538 810 aa4.39□□□□□ -1.71
HOS3YPL116W VAN1P23642 535 aa4.39□□□□□ -1.71
HOS3YPL116W RSC6P25632 483 aa4.39□□□□□ -1.71
HOS3YPL116W MSH1P25846 959 aa4.39□□□□□ -1.71
HOS3YPL116W SEC66P33754 206 aa4.39□□□□□ -1.71
HOS3YPL116W YHR020WP38708 688 aaKnown RBP4.39□□□□□ -1.71
HOS3YPL116W CTM1P38818 585 aa4.39□□□□□ -1.71
HOS3YPL116W YGL242CP53066 181 aa4.39□□□□□ -1.71
HOS3YPL116W COP1P53622 1201 aaKnown RBP4.39□□□□□ -1.71
HOS3YPL116W HST1P53685 503 aa4.39□□□□□ -1.71
HOS3YPL116W MLH2Q07980 695 aa4.39□□□□□ -1.71
HOS3YPL116W YAH1Q12184 172 aaKnown RBP4.39□□□□□ -1.71
HOS3YPL116W SMC4Q12267 1418 aa4.39□□□□□ -1.71
HOS3YPL116W ADH4P10127 382 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms