RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	HMG1	P12683	1054 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	NAT1	P12945	854 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	SEC23	P15303	768 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	ATE1	P16639	503 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	GAL11	P19659	1081 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	DAL7	P21826	554 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	MSM1	P22438	575 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	CLB4	P24871	460 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	CDC60	P26637	1090 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	PPH3	P32345	308 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	RPN2	P32565	945 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	PET112	P33893	541 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	TTI1	P36097	1038 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	ECM4	P36156	370 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	UGA2	P38067	497 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	TBS1	P38114	1094 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	YSW1	P38280	609 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	HSM3	P38348	480 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	OSH3	P38713	996 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	LIN1	P38852	340 aa	Predicted RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	SPT8	P38915	602 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	ACO2	P39533	789 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	VPS8	P39702	1274 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	NPR2	P39923	615 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	RRD1	P40454	393 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	SDS3	P40505	327 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	GCN20	P43535	752 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	SAP155	P43612	1002 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	VPS53	P47061	822 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	ILM1	P47155	203 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	CTH1	P47976	325 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	MSB3	P48566	633 aa	Predicted RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	MSN5	P52918	1224 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	LSC1	P53598	329 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	NCS2	P53923	493 aa	Predicted RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	SEC5	P89102	971 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	RIP-Chip
LCL1	YPL056C	FOX2	Q02207	900 aa	Known RBP	2.91	□□□□□ -1.94
LCL1	YPL056C	RSM28	Q03430	361 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	FAR8	Q05040	523 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	STE23	Q06010	1027 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	VAM6	Q07468	1049 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	MET7	Q08645	548 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	TY4A-H	Q6Q5P6	413 aa		2.91	□□□□□ -1.94
LCL1	YPL056C	PRT1	P06103	763 aa	Known RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	ADE3	P07245	946 aa	Known RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	PET494	P07390	489 aa	Predicted RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	ADH4	P10127	382 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	TAL1	P15019	335 aa	Known RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	SSA4	P22202	642 aa	Known RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	KCC4	P25389	1037 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	SWC3	P31376	625 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	PDB1	P32473	366 aa	Known RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	TFC3	P34111	1160 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	PTH2	P34222	208 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	COY1	P34237	679 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	YKR018C	P36114	725 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	NUP60	P39705	539 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	SPC72	P39723	622 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	SYG1	P40528	902 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	AIM21	P40563	679 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	MAD1	P40957	749 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	SET2	P46995	733 aa	Known RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	LYS4	P49367	693 aa	Predicted RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	SHE10	P53075	577 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	HOS2	P53096	452 aa	Predicted RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	YGL081W	P53156	320 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	DSL1	P53847	754 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	BNI5	P53890	448 aa	Known RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	MFM1	Q02783	413 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	CEF1	Q03654	590 aa	Predicted RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	TAF8	Q03750	510 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	YML108W	Q03759	105 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	ERB1	Q04660	807 aa	Known RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	EIS1	Q05050	843 aa	Known RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	SFH1	Q06168	426 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	MMR1	Q06324	491 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	SPN1	Q06505	410 aa	Predicted RBP	2.9	□□□□□ -1.95
LCL1	YPL056C	PSK2	Q08217	1101 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	BUD7	Q08754	746 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	PCL8	Q08966	492 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	YOR223W	Q12015	292 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	HMI1	Q12039	706 aa		2.9	□□□□□ -1.95
LCL1	YPL056C	RNR2	P09938	399 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	PDR1	P12383	1068 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	GCD2	P12754	651 aa	Predicted RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	TYR1	P20049	452 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	RPO26	P20435	155 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	SPE2	P21182	396 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	IME1	P21190	360 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.89	□□□□□ -1.95	not detected
LCL1	YPL056C	UGA3	P26370	528 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	ECM32	P32644	1121 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	RAD5	P32849	1169 aa	Predicted RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	ESL2	P36168	1195 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	UBP13	P38187	747 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	AMN1	P38285	549 aa	Predicted RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	PIH1	P38768	344 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	SSZ1	P38788	538 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	SAK1	P38990	1142 aa		2.89	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 85.6 ms