RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W TAF12Q03761 539 aa4.13□□□□□ -1.75
SWI1YPL016W RSM24Q03976 319 aa4.13□□□□□ -1.75
SWI1YPL016W PLP1Q04004 230 aa4.13□□□□□ -1.75
SWI1YPL016W NOP12Q08208 459 aaKnown RBP4.13□□□□□ -1.75
SWI1YPL016W YBL113CQ7M4S9 792 aa4.13□□□□□ -1.75
SWI1YPL016W IRE1P32361 1115 aa4.13□□□□□ -1.75
SWI1YPL016W RIB7P33312 244 aa4.13□□□□□ -1.75
SWI1YPL016W MRX1P40050 688 aa4.13□□□□□ -1.75
SWI1YPL016W YJR079WP47126 109 aa4.13□□□□□ -1.75
SWI1YPL016W ATP22P50273 684 aaPredicted RBP4.13□□□□□ -1.75
SWI1YPL016W YPL109CQ02981 657 aa4.13□□□□□ -1.75
SWI1YPL016W SPO71Q03868 1245 aa4.13□□□□□ -1.75
SWI1YPL016W TAF9Q05027 157 aa4.13□□□□□ -1.75
SWI1YPL016W BUD21Q08492 214 aaPredicted RBP4.13□□□□□ -1.75
SWI1YPL016W TTI1P36097 1038 aa4.13□□□□□ -1.75
SWI1YPL016W SHM1P37292 490 aaPredicted RBP4.13□□□□□ -1.75
SWI1YPL016W OSW7P43611 510 aa4.13□□□□□ -1.75
SWI1YPL016W GDE1Q02979 1223 aa4.13□□□□□ -1.75
SWI1YPL016W YDR341CQ05506 607 aaKnown RBP4.13□□□□□ -1.75
SWI1YPL016W WHI4Q07655 649 aaKnown RBP4.13□□□□□ -1.75
SWI1YPL016W URE2P23202 354 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W RRP43P25359 394 aaPredicted RBP4.12□□□□□ -1.75
SWI1YPL016W TRP5P00931 707 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W KIN2P13186 1147 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W MCM3P24279 971 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W NAM7P30771 971 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W TPD3P31383 635 aa4.12□□□□□ -1.75
SWI1YPL016W ERT1P38140 529 aa4.12□□□□□ -1.75
SWI1YPL016W MMS21P38632 267 aa4.12□□□□□ -1.75
SWI1YPL016W PES4P39684 611 aa4.12□□□□□ -1.75
SWI1YPL016W BOP3P53958 396 aa4.12□□□□□ -1.75
SWI1YPL016W TFB2Q02939 513 aa4.12□□□□□ -1.75
SWI1YPL016W TSR3Q12094 313 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W LEU1P07264 779 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W ACH1P32316 526 aa4.12□□□□□ -1.75
SWI1YPL016W REV7P38927 245 aa4.12□□□□□ -1.75
SWI1YPL016W RBL2P48606 106 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W MON1P53129 644 aa4.12□□□□□ -1.75
SWI1YPL016W PKH1Q03407 766 aa4.12□□□□□ -1.75
SWI1YPL016W YKU80Q04437 629 aa4.12□□□□□ -1.75
SWI1YPL016W IMH1Q06704 911 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W IOC2Q12072 812 aa4.12□□□□□ -1.75
SWI1YPL016W HTZ1Q12692 134 aaKnown RBP4.12□□□□□ -1.75
SWI1YPL016W PYC1P11154 1178 aaKnown RBP4.11□□□□□ -1.75
SWI1YPL016W PAP1P29468 568 aaKnown RBP4.11□□□□□ -1.75
SWI1YPL016W HSP104P31539 908 aaKnown RBP4.11□□□□□ -1.75
SWI1YPL016W PEX18P38855 283 aa4.11□□□□□ -1.75
SWI1YPL016W YEL023CP39992 682 aa4.11□□□□□ -1.75
SWI1YPL016W MIC19P43594 170 aa4.11□□□□□ -1.75
SWI1YPL016W MRC1P25588 1096 aa4.11□□□□□ -1.75
SWI1YPL016W ACP1P32463 125 aa4.11□□□□□ -1.75
SWI1YPL016W CBF5P33322 483 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
SWI1YPL016W IST1P53843 298 aaPredicted RBP4.11□□□□□ -1.75
SWI1YPL016W SPN1Q06505 410 aaPredicted RBP4.11□□□□□ -1.75
SWI1YPL016W VAM6Q07468 1049 aa4.11□□□□□ -1.75
SWI1YPL016W TUP1P16649 713 aa4.11□□□□□ -1.75
SWI1YPL016W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
SWI1YPL016W FMS1P50264 508 aa4.11□□□□□ -1.75
SWI1YPL016W STE20Q03497 939 aaKnown RBP4.11□□□□□ -1.75
SWI1YPL016W SXM1Q04175 944 aaKnown RBP4.11□□□□□ -1.75
SWI1YPL016W AAP1P37898 856 aaKnown RBP4.1□□□□□ -1.75
SWI1YPL016W AMN1P38285 549 aaPredicted RBP4.1□□□□□ -1.75
SWI1YPL016W JJJ2P46997 583 aa4.1□□□□□ -1.75
SWI1YPL016W ENT3P47160 408 aa4.1□□□□□ -1.75
SWI1YPL016W SGD1Q06132 899 aa4.1□□□□□ -1.75
SWI1YPL016W MMR1Q06324 491 aa4.1□□□□□ -1.75
SWI1YPL016W ISW2Q08773 1120 aa4.1□□□□□ -1.75
SWI1YPL016W SLX4Q12098 748 aa4.1□□□□□ -1.75
SWI1YPL016W ATG9Q12142 997 aa4.1□□□□□ -1.75
SWI1YPL016W SSK22P25390 1331 aaPredicted RBP4.1□□□□□ -1.75
SWI1YPL016W HEM1P09950 548 aaPredicted RBP4.1□□□□□ -1.75
SWI1YPL016W CDC11P32458 415 aa4.1□□□□□ -1.75
SWI1YPL016W SLD2P34252 453 aa4.1□□□□□ -1.75
SWI1YPL016W TBS1P38114 1094 aa4.1□□□□□ -1.75
SWI1YPL016W TAF5P38129 798 aa4.1□□□□□ -1.75
SWI1YPL016W SPL2P38839 148 aa4.1□□□□□ -1.75
SWI1YPL016W ATG3P40344 310 aa4.1□□□□□ -1.75
SWI1YPL016W PRP6P19735 899 aaPredicted RBP4.1□□□□□ -1.75
SWI1YPL016W FAR1P21268 830 aa4.1□□□□□ -1.75
SWI1YPL016W SAK1P38990 1142 aa4.1□□□□□ -1.75
SWI1YPL016W NDC80P40460 691 aa4.1□□□□□ -1.75
SWI1YPL016W HOS4P40480 1083 aa4.1□□□□□ -1.75
SWI1YPL016W AXL1P40851 1208 aa4.1□□□□□ -1.75
SWI1YPL016W MAD1P40957 749 aa4.1□□□□□ -1.75
SWI1YPL016W HUL4P40985 892 aa4.1□□□□□ -1.75
SWI1YPL016W IMD4P50094 524 aaKnown RBP4.1□□□□□ -1.75
SWI1YPL016W FAR8Q05040 523 aa4.1□□□□□ -1.75
SWI1YPL016W ESC2Q06340 456 aa4.1□□□□□ -1.75
SWI1YPL016W BDF2Q07442 638 aa4.1□□□□□ -1.75
SWI1YPL016W SAM3Q08986 587 aa4.1□□□□□ -1.75
SWI1YPL016W SBP1P10080 294 aaKnown RBP4.09□□□□□ -1.75
SWI1YPL016W GPA2P10823 449 aa4.09□□□□□ -1.75
SWI1YPL016W SEC20P28791 383 aa4.09□□□□□ -1.75
SWI1YPL016W KES1P35844 434 aaKnown RBP4.09□□□□□ -1.75
SWI1YPL016W RKM4Q12504 494 aa4.09□□□□□ -1.75
SWI1YPL016W GPA1P08539 472 aa4.09□□□□□ -1.75
SWI1YPL016W SIT4P20604 311 aa4.09□□□□□ -1.75
SWI1YPL016W OSM1P21375 501 aaKnown RBP4.09□□□□□ -1.75
SWI1YPL016W RLP7P40693 322 aaKnown RBP4.09□□□□□ -1.75
SWI1YPL016W SYF1Q04048 859 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 88.4 ms